Article

Vishwakarma, Rishabh, Byrne, Laura, Connolly, John, de Andrade Moral, Rafael and Brophy, Caroline (2023) Estimation of the non-linear parameter in Generalised Diversity-Interactions models is unaffected by change in structure of the interaction terms. Environmental and Ecological Statistics, 30 (3). pp. 555-574. ISSN 1352-8505

Moral, Rafael A., Vishwakarma, Rishabh, Connolly, John, Byrne, Laura, Hurley, Catherine, Finn, John A. and Brophy, Caroline (2023) Going beyond richness: Modelling the BEF relationship using species identity, evenness, richness and species interactions via the DImodels R package. Methods in Ecology and Evolution, 14 (9). pp. 2250-2258. ISSN 2041-210X

Connolly, John, Sebastia, M.-Teresa, Kirwan, Laura, Finn, John Anthony, Llurba, Rosa, Suter, Matthias, Collins, Rosemary, Porqueddu, Claudio, Helgadottir, Aslaug, Baadshaug, Ole, Belanger, Gilles, Black, Alistair, Brophy, Caroline, Cop, Jure, Dalmannsdóttir, Sigridur, Delgado, Ignacio, Elgersma, Anjo, Fothergill, Michael, Frankow-Lindberg, Bodil E., Ghesquière, Anne, Golinski, Piotr, Grieu, Philippe, Gustavsson, Anne-Maj, Hoglind, Mats, Huguenin-Elie, Olivier, Jørgensen, Marit, Kadziuliene, Zydre, Lunnan, Tor, Nykanen-Kurki, Paivi, Ribas, Angela, Taube, Friedhelm, Thumm, Ulrich, de Vliegher, Alex and Luscher, Andreas (2018) Weed suppression greatly increased by plant diversity in intensively managed grasslands: A continental- scale experiment. Journal of Applied Ecology, 55 (2). pp. 852-862. ISSN 0021-8901

Brophy, Caroline, Dooley, Aine, Kirwan, Laura, Finn, John Anthony, McDonnell, Jack, Bell, Thomas, Cadotte, Marc W. and Connolly, John (2017) Biodiversity and ecosystem function: making sense of numerous species interactions in multi‐species communities. Ecology, 98 (7). pp. 1771-1778. ISSN 0012-9658

Richards, K.G., Jahangir, M.M.R., Drennan, M., Lenehan, J.J., Connolly, John, Brophy, Caroline and Carton, O.T. (2015) Effect of an Agri-environmental Measure on Nitrate Leaching from a Beef Farming System in Ireland. Agriculture, Ecosystems & Environment, 202. pp. 17-24. ISSN 0167-8809

Dooley, Aine, Isbell, Forest, Kirwan, Laura, Connolly, John, Finn, John Anthony and Brophy, Caroline (2015) Testing the effects of diversity on ecosystem multifunctionality using a multivariate model. Ecology Letters, 18 (11). pp. 1242-1251. ISSN 1461-023X

Kirwan, Laura, Connolly, John, Brophy, Caroline, Baadshaug, Ole, Bellanger, Gilles, Black, Alistair, Carnus, Tim, Collins, Rosemary, Cop, Jure, Delgado, Ignacio, de Vliegher, Alex, Elgersma, Anjo, Frankowlindberg, Bodil, Golinski, Piotr, Grieu, Philippe, Gustavsson, Anne-Maj, Helgadottir, Aslaug, Hoglind, Mats, Huguenin-Elie, Olivier, Jorgensen, Marit, Kadziuliene, Zydre, Lunnan, Tor, Luscher, Andreas, Kurki, Paivi, Porqueddu, Claudio, Sebastia, M.-Teresa, Thumm, Ulrich, Walmsley, David and Finn, John (2014) The Agrodiversity Experiment: three years of data from a multisite study in intensively managed grasslands. Ecology, 95 (9). p. 2680. ISSN 0012-9658

Finn, John Anthony, Kirwan, Laura, Connolly, John, Sebastia, M.-Teresa, Helgadottir, Aslaug, Baadshaug, Ole, Belanger, Gilles, Black, Alistair, Brophy, Caroline, Collins, Rosemary, Cop, Jure, Dalmannsdóttir, Sigridur, Delgado, Ignacio, Elgersma, Anjo, Fothergill, Michael, Frankow‐Lindberg, Bodil, Ghesquière, Anne, Golinska, Barbara, Golinski, Piotr, Grieu, Philippe, Gustavsson, Anne-Maj, Hoglind, Mats, Huguenin-Elie, Olivier, Jorgensen, Marit, Kadziuliene, Zydre, Kurki, Paivi, Llurba, Rosa, Lunnan, Tor, Porqueddu, Claudio, Suter, Matthias, Thumm, Ulrich and Luscher, Andreas (2013) Ecosystem function enhanced by combining four functional types of plant species in intensively managed grassland mixtures: a 3‐year continental‐scale field experiment. Journal of Applied Ecology, 50 (2). pp. 365-375. ISSN 0021-8901

Connolly, John, Bell, Thomas, Bolger, Thomas, Brophy, Caroline, Carnus, Tim, Finn, John Anthony, Kirwan, Laura, Isbell, Forest, Levine, Jonathan, Luscher, Andreas, Picasso, Valentin, Roscher, Christiane, Sebastia, M.-Teresa, Suter, Matthias and Weigelt, Alexandra (2013) An improved model to predict the effects of changing biodiversity levels on ecosystem function. Journal of Ecology, 101 (2). pp. 344-355. ISSN 0022-0477

Brophy, Caroline, Connolly, John, Fagerli, I.L., Duodu, Samuel and Svenning, Mette M. (2011) A Baseline Category Logit Model for Assessing Competing Strains of Rhizobium Bacteria. Journal of Agricultural, Biological, and Environmental Statistics, 16 (3). pp. 409-421. ISSN 1085-7117

Connolly, John, Cadotte, Marc W., Brophy, Caroline, Dooley, Aine, Finn, John Anthony, Kirwan, Laura, Roscher, Christiane and Weigelt, Alexandra (2011) Phylogenetically diverse grasslands are associated with pairwise interspecific processes that increase biomass. Ecology, 92 (7). pp. 1385-1392. ISSN 0012-9658

Frankow-Lindberg, Bodil E., Brophy, Caroline, Collins, R.P. and Connolly, John (2009) Biodiversity effects on yield and unsown species invasion in a temperate forage ecosystem. Annals of Botany, 103 (6). pp. 913-921. ISSN 0305-7364

Stinson, Kristina A., Brophy, Caroline and Connolly, John (2009) Catching up on global change: new ragweed genotypes emerge in elevated CO2 conditions. Ecosphere, 2 (46). ISSN 2150-8925

Duodu, Samuel, Brophy, Caroline, Connolly, John and Svenning, Mette M. (2009) Competitiveness of a native Rhizobium leguminosarum biovar trifolii strain for nodule occupancy is manifested during infection. Plant and Soil, 318. pp. 117-126. ISSN 1573-5036

Kirwan, Laura, Connolly, John, Finn, John Anthony, Brophy, Caroline, Luscher, Andreas, Nyfeler, D. and Sebastia, M.-Teresa (2009) Diversity–interaction modeling: estimating contributions of species identities and interactions to ecosystem function. Ecology, 90 (8). pp. 2032-2038. ISSN 0012-9658

Connolly, John, Finn, John Anthony, Black, Alistair, Kirwan, Laura, Brophy, Caroline and Luscher, Andreas (2009) Effects of multi-species swards on dry matter production and the incidence of unsown species at three Irish sites. Irish Journal of Agricultural and Food Research, 48. pp. 243-260. ISSN 07916833

Brophy, Caroline, Gibson, David J., Wayne, Peter M. and Connolly, John (2008) How reproductive allocation and flowering probability of individuals in plant populations are affected by position in stand size hierarchy, plant size and CO2 regime. Journal of Plant Ecology, 1. pp. 207-215. ISSN 1752-9921

Kirwan, Laura, Luscher, Andreas, Sebastia, M.-Teresa, Finn, John Anthony, Collins, R.P., Porqueddu, Claudio, Helgadottir, Aslaug, Baadshaug, Ole, Brophy, Caroline, Coran, C., Dalmansdottir, S., Delgado, Ignacio, Elgersma, Anjo, Fothergill, Michael, Frankow-Lindberg, Bodil E., Golinski, Piotr, Grieu, Philippe, Gustavsson, Anne-Maj, Hoglind, Mats, Huguenin-Elie, Olivier, Iliadis, C,, Kadziuliene, Zydre, Karyotis, T., Lunnan, Tor, Malengier, M., Maltoni, S., Meyer, Vera, Nyfeler, D., Nykanen-Kurki, Paivi, Parente, J., Smit, H.J., Thumm, Ulrich and Connolly, John (2007) Evenness drives consistent diversity effects in intensive grassland systems across 28 European sites. Journal of Ecology, 95 (3). pp. 530-539. ISSN 0022-0477

Brophy, Caroline, Gibson, David J., Wayne, Peter M. and Connolly, John (2007) A modelling framework for analysing the reproductive output of individual plants grown in monoculture. Ecological Modelling, 207 (2-4). pp. 99-108. ISSN 0304-3800

Ryan, M., Brophy, Caroline, Connolly, John, McNamara, K. and Carton, O.T. (2006) Monitoring of nitrogen leaching on a dairy farm during four drainage seasons. Irish Journal of Agricultural and Food Research, 45 (2). pp. 115-134. ISSN 0791-6833