Article

Vishwakarma, Rishabh and Byrne, Laura and Connolly, John and de Andrade Moral, Rafael and Brophy, Caroline (2023) Estimation of the non-linear parameter in Generalised Diversity-Interactions models is unaffected by change in structure of the interaction terms. Environmental and Ecological Statistics, 30 (3). pp. 555-574. ISSN 1352-8505

Moral, Rafael A. and Vishwakarma, Rishabh and Connolly, John and Byrne, Laura and Hurley, Catherine and Finn, John A. and Brophy, Caroline (2023) Going beyond richness: Modelling the BEF relationship using species identity, evenness, richness and species interactions via the DImodels R package. Methods in Ecology and Evolution, 14 (9). pp. 2250-2258. ISSN 2041-210X

Connolly, John and Sebastia, M.-Teresa and Kirwan, Laura and Finn, John Anthony and Llurba, Rosa and Suter, Matthias and Collins, Rosemary and Porqueddu, Claudio and Helgadottir, Aslaug and Baadshaug, Ole and Belanger, Gilles and Black, Alistair and Brophy, Caroline and Cop, Jure and Dalmannsdóttir, Sigridur and Delgado, Ignacio and Elgersma, Anjo and Fothergill, Michael and Frankow-Lindberg, Bodil E. and Ghesquière, Anne and Golinski, Piotr and Grieu, Philippe and Gustavsson, Anne-Maj and Hoglind, Mats and Huguenin-Elie, Olivier and Jørgensen, Marit and Kadziuliene, Zydre and Lunnan, Tor and Nykanen-Kurki, Paivi and Ribas, Angela and Taube, Friedhelm and Thumm, Ulrich and de Vliegher, Alex and Luscher, Andreas (2018) Weed suppression greatly increased by plant diversity in intensively managed grasslands: A continental- scale experiment. Journal of Applied Ecology, 55 (2). pp. 852-862. ISSN 0021-8901

Brophy, Caroline and Dooley, Aine and Kirwan, Laura and Finn, John Anthony and McDonnell, Jack and Bell, Thomas and Cadotte, Marc W. and Connolly, John (2017) Biodiversity and ecosystem function: making sense of numerous species interactions in multi‐species communities. Ecology, 98 (7). pp. 1771-1778. ISSN 0012-9658

Richards, K.G. and Jahangir, M.M.R. and Drennan, M. and Lenehan, J.J. and Connolly, John and Brophy, Caroline and Carton, O.T. (2015) Effect of an Agri-environmental Measure on Nitrate Leaching from a Beef Farming System in Ireland. Agriculture, Ecosystems & Environment, 202. pp. 17-24. ISSN 0167-8809

Dooley, Aine and Isbell, Forest and Kirwan, Laura and Connolly, John and Finn, John Anthony and Brophy, Caroline (2015) Testing the effects of diversity on ecosystem multifunctionality using a multivariate model. Ecology Letters, 18 (11). pp. 1242-1251. ISSN 1461-023X

Kirwan, Laura and Connolly, John and Brophy, Caroline and Baadshaug, Ole and Bellanger, Gilles and Black, Alistair and Carnus, Tim and Collins, Rosemary and Cop, Jure and Delgado, Ignacio and de Vliegher, Alex and Elgersma, Anjo and Frankowlindberg, Bodil and Golinski, Piotr and Grieu, Philippe and Gustavsson, Anne-Maj and Helgadottir, Aslaug and Hoglind, Mats and Huguenin-Elie, Olivier and Jorgensen, Marit and Kadziuliene, Zydre and Lunnan, Tor and Luscher, Andreas and Kurki, Paivi and Porqueddu, Claudio and Sebastia, M.-Teresa and Thumm, Ulrich and Walmsley, David and Finn, John (2014) The Agrodiversity Experiment: three years of data from a multisite study in intensively managed grasslands. Ecology, 95 (9). p. 2680. ISSN 0012-9658

Finn, John Anthony and Kirwan, Laura and Connolly, John and Sebastia, M.-Teresa and Helgadottir, Aslaug and Baadshaug, Ole and Belanger, Gilles and Black, Alistair and Brophy, Caroline and Collins, Rosemary and Cop, Jure and Dalmannsdóttir, Sigridur and Delgado, Ignacio and Elgersma, Anjo and Fothergill, Michael and Frankow‐Lindberg, Bodil and Ghesquière, Anne and Golinska, Barbara and Golinski, Piotr and Grieu, Philippe and Gustavsson, Anne-Maj and Hoglind, Mats and Huguenin-Elie, Olivier and Jorgensen, Marit and Kadziuliene, Zydre and Kurki, Paivi and Llurba, Rosa and Lunnan, Tor and Porqueddu, Claudio and Suter, Matthias and Thumm, Ulrich and Luscher, Andreas (2013) Ecosystem function enhanced by combining four functional types of plant species in intensively managed grassland mixtures: a 3‐year continental‐scale field experiment. Journal of Applied Ecology, 50 (2). pp. 365-375. ISSN 0021-8901

Connolly, John and Bell, Thomas and Bolger, Thomas and Brophy, Caroline and Carnus, Tim and Finn, John Anthony and Kirwan, Laura and Isbell, Forest and Levine, Jonathan and Luscher, Andreas and Picasso, Valentin and Roscher, Christiane and Sebastia, M.-Teresa and Suter, Matthias and Weigelt, Alexandra (2013) An improved model to predict the effects of changing biodiversity levels on ecosystem function. Journal of Ecology, 101 (2). pp. 344-355. ISSN 0022-0477

Brophy, Caroline and Connolly, John and Fagerli, I.L. and Duodu, Samuel and Svenning, Mette M. (2011) A Baseline Category Logit Model for Assessing Competing Strains of Rhizobium Bacteria. Journal of Agricultural, Biological, and Environmental Statistics, 16 (3). pp. 409-421. ISSN 1085-7117

Connolly, John and Cadotte, Marc W. and Brophy, Caroline and Dooley, Aine and Finn, John Anthony and Kirwan, Laura and Roscher, Christiane and Weigelt, Alexandra (2011) Phylogenetically diverse grasslands are associated with pairwise interspecific processes that increase biomass. Ecology, 92 (7). pp. 1385-1392. ISSN 0012-9658

Frankow-Lindberg, Bodil E. and Brophy, Caroline and Collins, R.P. and Connolly, John (2009) Biodiversity effects on yield and unsown species invasion in a temperate forage ecosystem. Annals of Botany, 103 (6). pp. 913-921. ISSN 0305-7364

Stinson, Kristina A. and Brophy, Caroline and Connolly, John (2009) Catching up on global change: new ragweed genotypes emerge in elevated CO2 conditions. Ecosphere, 2 (46). ISSN 2150-8925

Duodu, Samuel and Brophy, Caroline and Connolly, John and Svenning, Mette M. (2009) Competitiveness of a native Rhizobium leguminosarum biovar trifolii strain for nodule occupancy is manifested during infection. Plant and Soil, 318. pp. 117-126. ISSN 1573-5036

Kirwan, Laura and Connolly, John and Finn, John Anthony and Brophy, Caroline and Luscher, Andreas and Nyfeler, D. and Sebastia, M.-Teresa (2009) Diversity–interaction modeling: estimating contributions of species identities and interactions to ecosystem function. Ecology, 90 (8). pp. 2032-2038. ISSN 0012-9658

Connolly, John and Finn, John Anthony and Black, Alistair and Kirwan, Laura and Brophy, Caroline and Luscher, Andreas (2009) Effects of multi-species swards on dry matter production and the incidence of unsown species at three Irish sites. Irish Journal of Agricultural and Food Research, 48. pp. 243-260. ISSN 07916833

Brophy, Caroline and Gibson, David J. and Wayne, Peter M. and Connolly, John (2008) How reproductive allocation and flowering probability of individuals in plant populations are affected by position in stand size hierarchy, plant size and CO2 regime. Journal of Plant Ecology, 1. pp. 207-215. ISSN 1752-9921

Kirwan, Laura and Luscher, Andreas and Sebastia, M.-Teresa and Finn, John Anthony and Collins, R.P. and Porqueddu, Claudio and Helgadottir, Aslaug and Baadshaug, Ole and Brophy, Caroline and Coran, C. and Dalmansdottir, S. and Delgado, Ignacio and Elgersma, Anjo and Fothergill, Michael and Frankow-Lindberg, Bodil E. and Golinski, Piotr and Grieu, Philippe and Gustavsson, Anne-Maj and Hoglind, Mats and Huguenin-Elie, Olivier and Iliadis, C, and Kadziuliene, Zydre and Karyotis, T. and Lunnan, Tor and Malengier, M. and Maltoni, S. and Meyer, Vera and Nyfeler, D. and Nykanen-Kurki, Paivi and Parente, J. and Smit, H.J. and Thumm, Ulrich and Connolly, John (2007) Evenness drives consistent diversity effects in intensive grassland systems across 28 European sites. Journal of Ecology, 95 (3). pp. 530-539. ISSN 0022-0477

Brophy, Caroline and Gibson, David J. and Wayne, Peter M. and Connolly, John (2007) A modelling framework for analysing the reproductive output of individual plants grown in monoculture. Ecological Modelling, 207 (2-4). pp. 99-108. ISSN 0304-3800

Ryan, M. and Brophy, Caroline and Connolly, John and McNamara, K. and Carton, O.T. (2006) Monitoring of nitrogen leaching on a dairy farm during four drainage seasons. Irish Journal of Agricultural and Food Research, 45 (2). pp. 115-134. ISSN 0791-6833