Article

Gargan, Stephen, Dowling, Paul, Zweyer, Margit, Reimann, Jens, Henry, Michael, Meleady, Paula, Swandulla, Dieter and Ohlendieck, Kay (2021) Mass Spectrometric Profiling of Extraocular Muscle and Proteomic Adaptations in the mdx-4cv Model of Duchenne Muscular Dystrophy. Life, 11 (7). p. 595. ISSN 2075-1729

Dowling, Paul, Gargan, Stephen, Zweyer, Margit, Sabir, Hemmen, Henry, Michael, Meleady, Paula, Swandulla, Dieter and Ohlendieck, Kay (2021) Proteomic profiling of the interface between the stomach wall and the pancreas in dystrophinopathy. European Journal of Translational Myology, 31 (1). ISSN 2037-7452

Dowling, Paul, Zweyer, Margit, Raucamp, Maren, Henry, Michael, Meleady, Paula, Swandulla, Dieter and Ohlendieck, Kay (2020) Dataset on the mass spectrometry-based proteomic profiling of the kidney from wild type and the dystrophic mdx-4cv mouse model of X-linked muscular dystrophy. Data in Brief, 28 (105067). pp. 1-9. ISSN 2352-3409

Dowling, Paul, Gargan, Stephen, Zweyer, Margit, Henry, Michael, Meleady, Paula, Swandulla, Dieter and Ohlendieck, Kay (2020) Proteome-wide Changes in the mdx-4cv Spleen due to Pathophysiological Cross Talk with Dystrophin-Deficient Skeletal Muscle. iScience, 23 (101500). ISSN 2589-0042

Dowling, Paul, Zweyer, Margit, Raucamp, Maren, Henry, Michael, Meleady, Paula, Swandulla, Dieter and Ohlendieck, Kay (2020) Proteomic and cell biological profiling of the renal phenotype of the mdx-4cv mouse model of Duchenne muscular dystrophy. European Journal of Cell Biology, 99 (151059). ISSN 0171-9335

Dowling, Paul, Gargan, Stephen, Zweyer, Margit, Henry, Michael, Meleady, Paula, Swandulla, Dieter and Ohlendieck, Kay (2020) Protocol for the Bottom-Up Proteomic Analysis of Mouse Spleen. STAR Protocols, 1 (100196). ISSN 2666-1667

Murphy, Sandra, Zweyer, Margit, Raucamp, Maren, Henry, Michael, Meleady, Paula, Swandulla, Dieter and Ohlendieck, Kay (2019) Proteomic profiling of the mouse diaphragm and refined mass spectrometric analysis of the dystrophic phenotype. Journal of Muscle Research and Cell Motility, 40. pp. 9-28. ISSN 0142-4319

Murphy, Sandra, Zweyer, Margit, Henry, Michael, Meleady, Paula, Mundegar, Rustam R, Swandulla, Dieter and Ohlendieck, Kay (2018) Proteomic analysis of the sarcolemma-enriched fraction from dystrophic mdx-4cv skeletal muscle. Journal of Proteomics, 191. pp. 212-227. ISSN 1874-3919

Murphy, Sandra, Zweyer, Margit, Henry, Michael, Meleady, Paula, Mundegar, Rustam R., Swandulla, Dieter and Ohlendieck, Kay (2018) Proteomic profiling of liver tissue from the mdx-4cv mouse model of Duchenne muscular dystrophy. Clinical Proteomics, 15 (34). ISSN 1559-0275

Murphy, Sandra, Zweyer, Margit, Henry, Michael, Meleady, Paula, Mundegar, Rustam R., Swandulla, Dieter and Ohlendieck, Kay (2018) Subproteomic profiling of sarcolemma from dystrophic mdx-4cv skeletal muscle. Data in Brief, 17. pp. 980-993. ISSN 2352-3409

Murphy, Sandra, Brinkmeier, Heinrich, Krautwald, Mirjam, Henry, Michael, Meleady, Paula and Ohlendieck, Kay (2017) Proteomic profiling of the dystrophin complex and membrane fraction from dystrophic mdx muscle reveals decreases in the cytolinker desmoglein and increases in the extracellular matrix stabilizers biglycan and fibronectin. Journal of Muscle Research and Cell Motility, 38 (2). pp. 251-368. ISSN 0142-4319

Ting, Kay Reen, Henry, Michael, Meiller, Justine, Larkin, Annemarie, Clynes, Martin, Meleady, Paula, Bazou, Despina, Dowling, Paul and O'Gorman, Peter (2017) Novel panel of protein biomarkers to predict response to bortezomib-containing induction regimens in multiple myeloma patients. BBA Clinical, 8. pp. 28-34. ISSN 2214-6474

Murphy, Sandra, Dowling, Paul, Zweyer, Margit, Henry, Michael, Meleady, Paula, Mundegar, Rustam R., Swandulla, Dieter and Ohlendieck, Kay (2017) Proteomic profiling of mdx-4cv serum reveals highly elevated levels of the inflammation-induced plasma marker haptoglobin in muscular dystrophy. International Journal of Molecular Medicine, 39 (6). pp. 1357-1370. ISSN 1791-244X

Moloney, Nicola M., Owens, Rebecca A., Meleady, Paula, Henry, Michael, Dolan, Stephen K., Mulvihill, Eoin, Clynes, Martin and Doyle, Sean (2016) The iron-responsive microsomal proteome of Aspergillus fumigatus. Journal of Proteomics, 136. pp. 99-111. ISSN 1874-3919

Holland, Ashling, Schmitt-John, Thomas, Dowling, Paul, Meleady, Paula, Henry, Michael, Clynes, Martin and Ohlendieck, Kay (2014) Intricate effects of primary motor neuronopathy on contractile proteins and metabolic muscle enzymes as revealed by label-free mass spectrometry. Bioscience Reports, 34 (4). pp. 331-343. ISSN 1573-4935

McDermott, Martina S.J., Browne, Brigid C., Conlon, Neil T., O'Brien, Neil A., Slamon, Dennis J., Henry, Michael, Meleady, Paula, Clynes, Martin, Dowling, Paul, Crown, John and O'Donovan, Norma (2014) PP2A inhibition overcomes acquired resistance to HER2 targeted therapy. Molecular Cancer, 13 (157). pp. 1-12. ISSN 1476-4598

O'Connell, Kathleen, Prencipe, Maria, O'Neill, Amanda, Corcoran, Claire, Rani, Sweta, Henry, Michael, Dowling, Paul, Meleady, Paula, O'Driscoll, Lorraine, Watson, William and O'Connor, Robert (2012) The use of LC-MS to identify differentially expressed proteins in docetaxel-resistant prostate cancer cell lines. Proteomics, 12 (13). pp. 2115-2126. ISSN 1615-9853

Egan, Brendan, Dowling, Paul, O'Connor, Paul L., Henry, Michael, Meleady, Paula, Zierath, Juleen R. and O'Gorman, Donal J. (2011) 2-D DIGE analysis of the mitochondrial proteome from human skeletal muscle reveals time coursedependent remodelling in response to 14 consecutive days of endurance exercise training. Proteomics, 11 (8). pp. 1413-1428. ISSN 1615-9853

Eustace, Alex J., Dowling, Paul, Henry, Michael, Doolan, Padraig, Meleady, Paula, Clynes, Martin, Crown, John and O'Donovan, Norma (2011) 2D-DIGE analysis of phospho-enriched fractions from dasatinib-treated melanoma cell lines. Journal of Proteomics, 74 (4). pp. 490-501. ISSN 1874-3919

Walsh, Naomi, O'Donovan, Norma, Kennedy, Susan, Henry, Michael, Meleady, Paula, Clynes, Martin and Dowling, Paul (2009) Identification of pancreatic cancer invasion-related proteins by proteomic analysis. Proteome Science, 7 (3). ISSN 1477-5956

Muniyappa, M.K., Dowling, Paul, Henry, M., Meleady, Paula, Doolan, P., Gammell, P., Clynes, Martin and Barron, N. (2009) MiRNA-29a regulates the expression of numerous proteins and reduces the invasiveness and proliferation of human carcinoma cell lines. European Journal of Cancer, 45 (17). pp. 3104-3118. ISSN 0959-8049

Walsh, Naomi, Dowling, Paul, O'Donovan, Norma, Henry, Michael, Meleady, Paula and Clynes, Martin (2008) Aldehyde dehydrogenase 1A1 and gelsolin identified as novel invasion-modulating factors in conditioned medium of pancreatic cancer cells. Journal of Proteomics, 71 (5). pp. 561-571. ISSN 1874-3919

Dowling, Paul, Wormald, Robert, Meleady, Paula, Henry, Michael, Curran, Aongus and Clynes, Martin (2008) Analysis of the saliva proteome from patients with head and neck squamous cell carcinoma reveals differences in abundance levels of proteins associated with tumour progression and metastasis. Journal of Proteomics, 71 (2). pp. 168-175. ISSN 1874-3919

Kumar, Niraj, Maurya, Priyanka, Gammell, Patrick, Dowling, Paul, Clynes, Martin and Meleady, Paula (2008) Proteomic Profiling of Secreted Proteins from CHO Cells Using Surface-Enhanced Laser Desorption Ionization Time-of-Flight Mass Spectrometry. Biotechnology Progress, 24 (1). pp. 273-278. ISSN 8756-7938

Dowling, Paul, Shields, William, Rani, Sweta, Meleady, Paula, Henry, Michael, Jeppesen, Per Bendix, O'Driscoll, Lorraine and Clynes, Martin (2008) Proteomic analysis of conditioned media from glucose responsive and glucose nonresponsive phenotypes reveals a panel of secreted proteins associated with beta cell dysfunction. Electrophoresis, 29 (20). pp. 4141-4149. ISSN 0173-0835

Dowling, Paul, O'Driscoll, Lorraine, Meleady, Paula, Henry, Michael, Roy, Shunil, Ballot, Jo, Moriarty, Michael, Crown, John and Clynes, Martin (2007) 2-D difference gel electrophoresis of the lung squamous cell carcinoma versus normal sera demonstrates consistent alterations in the levels of ten specific proteins. Electrophoresis, 28 (23). pp. 4302-4310. ISSN 0173-0835

Dowling, Paul, Meleady, Paula, Dowd, Andrew, Henry, Michael, Glynn, Sharon and Clynes, Martin (2007) Proteomic analysis of isolated membrane fractions from superinvasive cancer cells. Biochimica et Biophysica Acta - Proteins and Proteomics, 1774 (1). pp. 93-101. ISSN 1570-9639

Dowling, Paul, Maurya, Priyanka, Meleady, Paula, Glynn, Sharon, Dowd, Andrew, Henry, Michael and Clynes, Martin (2007) Purification and Identification of a 7.6-kDa Protein in Media Conditioned by Superinvasive Cancer Cells. Anticancer Research, 27 (3A). pp. 1309-1317. ISSN 0250-7005

Dowling, Paul, O'Driscoll, Lorraine, O'Sullivan, Finbarr, Dowd, Andrew, Henry, Michael, Jeppesen, Per Bendix, Meleady, Paula and Clynes, Martin (2006) Proteomic screening of glucose-responsive and glucose non-responsive MIN-6 beta cells reveals differential expression of proteins involved in protein folding, secretion and oxidative stress. Proteomics, 6 (24). pp. 6578-6587. ISSN 1615-9853

McBride, Shirley, Walsh, Derek, Meleady, Paula, Daly, Noel and Clynes, Martin (1999) Bromodeoxyuridine induces keratin protein synthesis at a posttranscriptional level in human lung tumour cell lines. Differentiation, 64. pp. 184-193. ISSN 0301-4681

McBride, Shirley, Meleady, Paula, Baird, Alan, Dinsdale, David and Clynes, Martin (1998) Human Lung Carcinoma Cell Line DLKP Contains 3 Distinct Subpopulations with Different Growth and Attachment Properties. Tumor Biology, 19. pp. 88-103. ISSN 1010-4283