McGill, Lorraine M., Fitzpatrick, David A., Pisani, Davide and Burnell, Ann (2017) Estimation of phylogenetic divergence times in Panagrolaimidae and other nematodes using relaxed molecular clocks calibrated with insect and crustacean fossils. Nematology, 19 (8). pp. 899-913. ISSN 1568-5411

Haggerty, Leanne S., Jachiet, Pierre-Alain, Hanage, William P., Fitzpatrick, David A., Lopez, Philippe, O'Connell, Mary J., Pisani, Davide, Wilkinson, Mark, Bapteste, Eric and McInerney, James O. (2014) A Pluralistic Account of Homology: Adapting the Models to the Data. Molecular Biology and Evolution, 31 (3). pp. 501-506. ISSN 0737-4038

Feuda, Roberto, Hamilton, Sinead C., McInerney, James O. and Pisani, Davide (2012) Metazoan opsin evolution reveals a simple route to animal vision. Proceedings of the National Academy of Sciences . ISSN 1091-6490

Sperling, Erik A., Peterson, Devin J. and Pisani, Davide (2009) Phylogenetic-Signal Dissection of Nuclear Housekeeping Genes Supports the Paraphyly of Sponges and the Monophyly of Eumetazoa. Molecular Biology and Evolution, 26 (10). pp. 2261-2274. ISSN 0737-4038

Pisani, Davide, Mohun, Samantha, Harris, Simon, McInerney, James and Wilkinson, Mark (2006) Molecular evidence for dim-light vision in the last common ancestor of the vertebrates. Current Biology, 16 (9). pp. 318-319.

Wilkinson, Mark, Thorley, Joseph L., Pisani, Davide, Lapointe, Francois-Joseph and McInerney, James O. (2004) Some Desiderata for Liberal Supertrees. In: Phylogenetic Supertrees. Computational Biology book series (COBO) (4). Springer, pp. 227-246. ISBN 9781402023293