Sahu, Neha, Merényi, Zsolt, Bálint, Balázs, Kiss, Brigitta, Sipos, György, Owens, Rebecca A. and Nagy, László G. (2021) Hallmarks of Basidiomycete Soft- and White-Rot in Wood-Decay -Omics Data of Two Armillaria Species. Microorganisms, 9 (149). pp. 1-20. ISSN 2076-2607
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Abstract
Wood-decaying Basidiomycetes are among the most efficient degraders of plant cell walls,
making them key players in forest ecosystems, global carbon cycle, and in bio-based industries.
Recent insights from -omics data revealed a high functional diversity of wood-decay strategies,
especially among the traditional white-rot and brown-rot dichotomy. We examined the mechanistic
bases of wood-decay in the conifer-specialists Armillaria ostoyae and Armillaria cepistipes using transcriptomic and proteomic approaches. Armillaria spp. (Fungi, Basidiomycota) include devastating
pathogens of temperate forests and saprotrophs that decay wood. They have been discussed as
white-rot species, though their response to wood deviates from typical white-rotters. While we observed an upregulation of a diverse suite of plant cell wall degrading enzymes, unlike white-rotters,
they possess and express an atypical wood-decay repertoire in which pectinases and expansins are
enriched, whereas lignin-decaying enzymes (LDEs) are generally downregulated. This combination of wood decay genes resembles the soft-rot of Ascomycota and appears widespread among
Basidiomycota that produce a superficial white rot-like decay. These observations are consistent
with ancestral soft-rot decay machinery conserved across asco- and Basidiomycota, a gain of efficient
lignin-degrading ability in white-rot fungi and repeated, complete, or partial losses of LDE encoding
gene repertoires in brown- and secondarily soft-rot fungi.
Item Type: | Article |
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Keywords: | Armillaria wood-decay; basidiomycete soft-rot; plant biomass degradation; plant pathogens; proteomics; RNA-Seq; wood-decay types; |
Academic Unit: | Faculty of Science and Engineering > Biology Faculty of Science and Engineering > Research Institutes > Human Health Institute |
Item ID: | 16291 |
Identification Number: | 10.3390/microorganisms9010149 |
Depositing User: | Rebecca Owens |
Date Deposited: | 12 Jul 2022 12:53 |
Journal or Publication Title: | Microorganisms |
Publisher: | MDPI |
Refereed: | Yes |
Related URLs: | |
URI: | https://mural.maynoothuniversity.ie/id/eprint/16291 |
Use Licence: | This item is available under a Creative Commons Attribution Non Commercial Share Alike Licence (CC BY-NC-SA). Details of this licence are available here |
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