MURAL - Maynooth University Research Archive Library



    Items where Academic Unit is "Faculty of Science and Engineering > Biology"


    Up a level
    Export as [feed] Atom [feed] RSS 1.0 [feed] RSS 2.0
    Group by: Creators | Item Type
    Jump to: | A | B | C | D | E | F | G | H | J | K | L | M | N | O | P | Q | R | S | T | V | W | X | Y | Z | Ó
    Number of items at this level: 954.

    Zachariadis, O. and Cassidy, J.P. and Brady, J. and Mahon, Bernard P. (2006) gamma-delta T Cells Regulate the Early Inflammatory Response to Bordetella pertussis Infection in the Murine Respiratory Tract. Infection and Immunity, 74. pp. 1837-1845.

    A

    Abraham, K. and Mielke, H. and Huisinga, W. and Gundert-Remy, U. (2005) Internal Exposure of Children by Simulated Acute Inhalation of Volatile Organic Compounds: The Influence of Chemical Properties on the Child/Adult Concentration Ratio. Basic & Clinical Pharmacology & Toxicology (BCPT), 96 (3). pp. 242-243. ISSN 1742-7843

    Abraham, Klaus and Mielke, Hans and Huisinga, Wilhelm and Gundert-Remy, Ursula (2005) Elevated Internal Exposure of Children in Simulated Acute Inhalation of Volatile Organic Compounds: Effects of Concentration and Duration. Archives of Toxicology, 79 (2). pp. 63-73. ISSN 1432-0738

    Abu-Elteen, Khaled and Hamad, Mawieh and Kavanagh, Kevin (2007) Epsilometer Test-Based Determination of Susceptibility of Clinically Important Candida Isolates to Conventional Antifungal Agents. Journal of Medical Sciences (Faisalabad), 7 (3). pp. 374-382. ISSN 1682-4474

    Abuskhuna, A. and Briody, J.M. and McCann, Malachy and Devereux, M. and Kavanagh, Kevin and Fontecha, J.B. and McKee, V. (2004) Synthesis, structure and anti-fungal activity of dimeric Ag(I) complexes containing bis-imidazole ligands. Polyhedron, 23. pp. 1249-1255.

    Abuskhuna, Suaad and McCann, Malachy and Briody, John and Devereux, Michael and Kavanagh, Kevin and Kayal, Nijhuma and McKee, Vickie (2007) Synthesis and structure of metal complexes containing zwitterionic N-hydroxyimidazole ligands. Polyhedron, 26 (15). pp. 4573-4580. ISSN 0277-5387

    Adams, B.J. and Burnell, Ann and Powers, T.O. (1998) A Phylogenetic Analysis of Heterorhabditis (Nemata :Rhabditidae) Based on Internal Transcribed Spacer 1 DNA Sequence Data. Journal of Nematology, 30 (1). pp. 22-39.

    Adams, Keith L. and Song, Keming and Roessler, Philip G. and Nugent, Jacqueline M. and Doyle, Jane L. and Doyle, Jeff J. and Palmer, Jeffrey D. (1999) Intracellular gene transfer in action: Dual transcription and multiple silencings of nuclear and mitochondrial cox2 genes in legumes. Proceedings of the National Academy of Sciences, 96 (24). pp. 13863-13868. ISSN 1091-6490

    Ahmed, Yasar Luqman and Gerke, Jennifer and Park, Hee-Soo and Bayram, Ozgur and Neumann, Piotr and Ni, Min and Dickmanns, Achim and Kim, Sun Chang and Yu, Jae-Hyuk and Braus, Gerhard H. and Ficner, Ralf (2013) The Velvet Family of Fungal Regulators Contains a DNA-Binding Domain Structurally Similar to NF-kB. PLoS Biology, 11 (12). e1001750. ISSN 1545-7885

    Akanni, Wasiu (2014) Developing and applying supertree methods in Phylogenomics and Macroevolution. PhD thesis, National University of Ireland Maynooth.

    Akesson, A. and Ingvarsson, S. and Brady, K. and Moynagh, Paul N. and Borrebaeck, C.A.K. (2000) Rapid polarization of Th2 cells during induction of antigen-specific IgE antibodies in vitro. Clinical and Experimental Allergy, 30 (9). pp. 1298-1306. ISSN 0954-7894

    Al-Rawi, Nada and Kavanagh, Kevin (1998) A rapid method for the extraction of whole cell proteins from Candida species. Journal of Microbiological Methods, 34 (2). pp. 107-112. ISSN 0167-7012

    Alsaiyah, Mohamed A.M. and Ebssa, Lemma and Zenner, Annemie N.R.L. and O'Callaghan, Kathryn M. and Griffin, Christine (2009) Sex ratios and sex-biased infection behaviour in the entomopathogenic nematode genus Steinernema. International Journal for Parasitology, 39. pp. 725-734. ISSN 0020-7519

    Altpeter, Fredy and Baisakh, Niranjan and Beachy, Roger and Bock, Ralph and Capell, Teresa and Christou, Paul and Daniell, Henry and Datta, Karabi and Datta, Swapan and Dix, Philip and Fauquet, Claude and Huang, Ning and Kohli, Ajay and Mooibroek, Hans and Nicholson, Liz and Nguyen, Thi Thanh and Nugent, Gregory and Raemakers, Krit and Romano, Andrea and Somers, David A. and Stoger, Eva and Taylor, Nigel and Visser, Richard (2005) Particle bombardment and the genetic enhancement of crops: myths and realities. Molecular Breeding, 15 (3). pp. 305-327. ISSN 1380-3743

    Alves de Castro, Patricia and dos Reis, Thaila Fernanda and Dolan, Stephen K. and Manfiolli, Adriana Oliveira and Brown, Neil Andrew and Jones, Gary W. and Doyle, Sean and Riaño‐Pachón, Diego M. and Squina, Fabio M. and Caldana, Camila and Singh, Ashutosh and Del Poeta, Maurizio and Hagiwara, Daisuke and Silva-Rocha, Rafael and Goldman, Gustavo H. (2016) The Aspergillus fumigatus SchASCH9 kinase modulates SakAHOG1 MAP kinase activity and it is essential for virulence. Molecular Microbiology, 102 (4). pp. 642-671. ISSN 1365-2958

    Amich, Jorge and Dümig, Michaela and O'Keeffe, Grainne and Binder, Jasmin and Doyle, Sean and Beilhack, Andreas and Krappmann, Sven (2016) Exploration of Sulfur Assimilation of Aspergillus fumigatus Reveals Biosynthesis of Sulfur-Containing Amino Acids as a Virulence Determinant. Infection and Immunity, 84 (4). pp. 917-929. ISSN 0019-9567

    An, Lu and Fitzpatrick, David A. and Harrison, Paul M. (2016) Emergence and evolution of yeast prion and prion-like proteins. BMC Evolutionary Biology, 16 (24). ISSN 1471-2148

    Aneja, Babita and Azam, Mudsser and Alam, Shadab and Perwez, Ahmad and Maguire, Ronan and Yadava, Umesh and Kavanagh, Kevin and Daniliuc, Constantin G. and Rizvi, Moshahid A. and Haq, Qazi Mohd. Rizwanul and Abid, Mohammad (2018) Natural Product-Based 1,2,3-Triazole/Sulfonate Analogues as Potential Chemotherapeutic Agents for Bacterial Infections. ACS Omega, 3 (6). pp. 6912-6930. ISSN 2470-1343

    Aneja, Babita and Irfan, Mohammad and Kapil, Charu and Jairajpuri, Mohamad Aman and Maguire, Ronan Cathal and Kavanagh, Kevin and Rizvi, Moshahid A. and Manzoor, Nikhat and Azam, Amir and Abid, Mohammad (2016) Effect of novel triazole–amino acid hybrids on growth and virulence of Candida species: in vitro and in vivo studies. Organic and Biomolecular Chemistry, 14. pp. 10599-10619. ISSN 1477-0520

    Ansell, Richard J. and Tunon, Pilar Gonzalez and Wang, Yating and Myers, Peter and Ivory, Cornelius F. and Keen, Jeffrey N. and Findlay, John B. C. (2009) Electrophoretic field gradient focusing with on-column detection by fluorescence quenching. Analyst, 134. pp. 226-229. ISSN 0003-2654

    Armendáriz, Ignacio and Downes, Martin and Griffin, Christine (2002) Effect of Timber Condition on Parasitization of Pine Weevil ( Hylobius abietis L.) Larvae by Entomopathogenic Nematodes under Laboratory Conditions. Biocontrol Science and Technology, 12 (2). pp. 225-233. ISSN 1360-0478

    Armit, Christopher J. and O'Dea, Shirley and Clarke, Alan R. and Harrison, David J. (2002) Absence of p53 in Clara cells favours multinucleation and loss of cell cycle arrest. BMC Cell Biology, 3 (27). ISSN 1471-2121

    Asrafel, Hameda (2003) Circulating Natural Killer Cells and Natural Killer Receptor Positive T Cells In Patients with Hepatitis C. Masters thesis, National University of Ireland Maynooth.

    Atzei, Paola and Yang, Fan and Collery, Ross and Kennedy, Breandan N. and Moynagh, Paul N. (2010) Characterisation of expression patterns and functional role of Cactin in early zebrafish development. Gene Expression Patterns, 10 (4/5). pp. 199-206. ISSN 1567-133X

    Atzei, Paola and Gargan, Siobhan and Curran, Niamh and Moynagh, Paul N. (2010) Cactin Targets the MHC Class III Protein IκB-like (IκBL) and Inhibits NF-κB and Interferon-regulatory Factor Signaling Pathways. Journal of Biological Chemistry, 285 (47). pp. 36804-36817. ISSN 0021-9258

    B

    Banville, Nessa (2011) Characterisation of the G. mellonella cellular innate immune response and a comparison with the human neutrophil. PhD thesis, National University of Ireland Maynooth.

    Banville, Nessa and Browne, Niall and Kavanagh, Kevin (2012) Effect of nutrient deprivation on the susceptibility of Galleria mellonella larvae to infection. Virulence, 3 (6). pp. 497-503. ISSN 2150-5594

    Banville, Nessa and Fallon, John and McLoughlin, Kirstin and Kavanagh, Kevin (2011) Disruption of haemocyte function by exposure to cytochalasin b or nocodazole increases the susceptibility of Galleria mellonella larvae to infection. Microbes and Infection, 13. pp. 1191-1198. ISSN 1286-4579

    Bapteste, Eric and Lopez, Philippe and Bouchard, Frédéric and Baquero, Fernando and McInerney, James O. and Burian, Richard M. (2012) Evolutionary analyses of non-genealogical bonds produced by introgressive descent. Proceedings of the National Academy of Sciences, 109 (145). pp. 18266-8272. ISSN 1091-6490

    Barillot, C. and Coupé, P. and El Ganaoui, O. and Gibaud, B and Hellier, P. and Jannin, P. and Paul, P. and Prima, S. and Wiest-Daesslé, N. and Morandi, X. (2007) Image guidance in neurosurgical procedures, the "Visages" point of view. In: 2007 4th IEEE International Symposium on Biomedical Imaging: From Nano to Macro. Proceedings. IEEE, pp. 1056-1059. ISBN 1-4244-0672-2

    Barnard, A. and Mahon, Bernard P. and Watkins, J. and Readhead, K. and Mills, K.H.G. (1996) Thl/Th2 cell dichotomy in acquired immunity to Bordetella pertussis: variables in the in vivo priming and in vitro cytokine detection techniques affect the classification of T-cell subsets as Thl, Th2 or ThO. Immunology, 87 (3). pp. 372-380. ISSN 0019-2805

    Barribeau, Seth M. and Sadd, Ben M. and du Plessis, Louis and Brown, Mark J.F. and Buechel, Severine D. and Chappelle, Kaat and Carolan, James C. and Christiaens, Oliver and Colgan, Thomas J. and Erler, Silvio and Evans, Jay and Helbing, Sophie and Karaus, Elke and Lattorff, H. Michael and Marxer, Monica and Meeus, Ivan and Näpflin, Kathrin and Niu, Jinzhi and Schmid-Hempe, Regula and Smagghe, Guy and Waterhouse, Robert M. and Yu, Na and Zdobnov, Evgeny and Schmid-Hempel, Paul (2015) A depauperate immune repertoire precedes evolution of sociality in bees. Genome Biology, 16 (83). pp. 1-20. ISSN 1465-6906

    Barry, Frank P. and Murphy, J. Mary and O'Brien, Timothy and Mahon, Bernard P. (2005) Mesenchymal Stem Cell Transplantation for Tissue Repair. Seminars in Plastic Surgery, 19 (3). pp. 229-239. ISSN 1535-2188

    Bauer, Ingo and Pidroni, Angelo and Bayram, Ozgur and Brosch, Gerald and Graessle, Stefan (2019) Single-Step Enrichment of a TAP-Tagged Histone Deacetylase of the Filamentous Fungus Aspergillus nidulans for Enzymatic Activity Assay. Journal of Visualized Experiments, 147 (e59527). ISSN 1940-087X

    Bayram, Ozgur and Bayram, Ozlem Sarikaya and Ahmed, Yasar Luqman and Maruyama, Jun-ichi and Valerius, Oliver and Rizzoli, Silvio O. and Ficner, Ralf and Irniger, Stefan and Braus, Gerhard H. (2012) The Aspergillus nidulans MAPK Module AnSte11-Ste50- Ste7-Fus3 Controls Development and Secondary Metabolism. PLos Genetics, 8 (7). e1002816. ISSN 1553-7390

    Bayram, Ozgur and Biesemann, Christoph and Krappmann, Sven and Galland, Paul and Braus, Gerhard H. (2008) More Than a Repair Enzyme: Aspergillus nidulans Photolyase-like CryA Is a Regulator of Sexual Development. Molecular Biology of the Cell, 19 (8). pp. 3254-3262. ISSN 1059-1524

    Bayram, Ozgur and Braus, Gerhard H. (2012) Coordination of secondary metabolism and development in fungi: the velvet family of regulatory proteins. FEMS Microbiology Reviews, 36 (1). pp. 1-24. ISSN 0168-6445

    Bayram, Ozgur and Braus, Gerhard H. and Fischer, Reinhard and Rodriguez-Romero, Julio (2010) Spotlight on Aspergillus nidulans photosensory systems. Fungal Genetics and Biology, 47 (11). pp. 900-908. ISSN 1087-1845

    Bayram, Ozgur and Fuessner, Kirstin and Dumkowa, Marc and Herrfurth, Cornelia and Feussner, Ivo and Braus, Gerhard H. (2016) Changes of global gene expression and secondary metabolite accumulation during light-dependent Aspergillus nidulans development. Fungal Genetics and Biology, 87. pp. 30-53. ISSN 1087-1845

    Bayram, Ozgur and Krappmann, Sven and Ni, Min and Woo Bok, Jin and Helmstaedt, Kerstin and Valerius, Oliver and Braus-Stromeyer, Susanna A. and Kwon, Nak-Jung and Keller, Nancy and Yu, Jae-Hyuk and Braus, Gerhard H. (2008) VelB/VeA/LaeA Complex Coordinates Light Signal with Fungal Development and Secondary Metabolism. Science, 320 (5882). pp. 1504-1506. ISSN 0036-8075

    Bayram, Ozgur and Krappmann, Sven and Seiler, Stephan and Vogt, Nico and Braus, Gerhard H. (2008) Neurospora crassa ve-1 affects asexual conidiation. Fungal Genetics and Biology, 45 (2). pp. 127-138. ISSN 1087-1845

    Bayram, Ozgur and Sari, Fatih and Braus, Gerhard H. and Irniger, Stefan (2009) The protein kinase ImeB is required for light-mediated inhibition of sexual development and for mycotoxin production in Aspergillus nidulans. Molecular Microbiology, 71 (5). pp. 1278-1295. ISSN 0950-382X

    Bayram, Ozlem Sarikaya and Bayram, Ozgur and Valerius, Oliver and Park, Hee-Soo and Irniger, Stefan and Gerke, Jennifer and Ni, Min and Han, Kap-Hoon and Yu, Jae-Hyuk and Braus, Gerhard H. (2010) LaeA Control of Velvet Family Regulatory Proteins for Light-Dependent Development and Fungal Cell-Type Specificity. PLoS Genetics, 6 (12). e1001226. ISSN 1553-7390

    Bayram, Ozlem Sarikaya and Latgé, Jean Paul and Bayram, Ozgur (2017) MybA, a new player driving survival of the conidium of the human pathogen Aspergillus fumigatus. Current Genetics, 64 (1). pp. 141-146. ISSN 1432-0983

    Bergin, David and Murphy, Lisa and Keenan, Joanne and Clynes, Martin and Kavanagh, Kevin (2006) Pre-exposure to yeast protects larvae of Galleria mellonella from a subsequent lethal infection by Candida albicans and is mediated by the increased expression of antimicrobial peptides. Microbes and Infection, 8 (8). pp. 2105-2112. ISSN 1769-714X

    Bergin, David and Reeves, Emer P. and Renwick, Julie and Wientjes, Frans B. and Kavanagh, Kevin (2005) Superoxide Production in Galleria mellonella Hemocytes: Identification of Proteins Homologous to the NADPH Oxidase Complex of Human Neutrophils. Infection and Immunity, 73 (7).

    Bergin, David and Reeves, Emer P. and Renwick, Julie and Wientjes, Frans B. and Kavanagh, Kevin (2005) Superoxide Production in Galleria mellonella Hemocytes: Identification of Proteins Homologous to the NADPH Oxidase Complex of Human Neutrophils. Infection and Immunity, 73 (7). pp. 4161-4170.

    Bergin, David and Brennan, Marc and Kavanagh, Kevin (2003) Fluctuations in haemocyte density and microbial load may be used as indicators of fungal pathogenicity in larvae of Galleria mellonella. Microbes and Infection, 5 (15). pp. 1389-1395. ISSN 1286-4579

    Bergin, Ronan (2015) Analysis of the role of Pellino2 in the Activation of the NLRP3 Inflammasome. PhD thesis, National University of Ireland Maynooth.

    Blundell, Renald and Harrison, David J. and O'Dea, Shirley (2004) p21(Waf1/Cip1) regulates proliferation and apoptosis in airway epithelial cells and alternative forms have altered binding activities. Experimental Lung Research, 30 (6). pp. 447-464. ISSN 0190-2148

    Boo, T.W. and Walsh, Fiona and Crowley, B. (2006) First report of OXA-23 carbapenemase in clinical isolates of Acinetobacter species in the Irish Republic. Journal of Antimicrobial Chemotherapy, 58 (5). pp. 1101-1102. ISSN 0305-7453

    Boo, T.W. and Walsh, Fiona and Crowley, B. (2009) Molecular characterization of carbapenem-resistant Acinetobacter species in an Irish university hospital: predominance of Acinetobacter genomic species 3. Journal of Medical Microbiology, 58 (2). pp. 209-216. ISSN 0022-2615

    Boulain, Hélène and Legeai, Fabrice and Guy, Endrick and Morlière, Stéphanie and Douglas, Nadine E. and Oh, Jonghee and Murugan, Marimuthu and Smith, Michael and Jaquiéry, Julie and Peccoud, Jean and White, Frank F. and Carolan, James C. and Simon, Jean-Christophe and Sugio, Akiko (2018) Fast Evolution and Lineage-Specific Gene Family Expansions of Aphid Salivary Effectors Driven by Interactions with Host-Plants. Genome Biology and Evolution, 10 (6). pp. 1554-1572. ISSN 1759-6653

    Boulenouar, Selma and Michelet, Xavier and Duquette, Danielle and Alvarez, Daniel and Hogan, Andrew and Dold, Christina and O’Connor, Donal and Stutte, Suzanne and Tavakkoli, Ali and Winters, Desmond and Exley, Mark A. and O'Sheal, Donal and Brenner, Michael B. and von Andrian, Ulrich and Lynch, Lydia (2017) Adipose Type One Innate Lymphoid Cells Regulate Macrophage Homeostasis through Targeted Cytotoxicity. Immunity, 46 (2). pp. 273-286. ISSN 1097-4180

    Bourke, Emer and Kennedy, Eugene J. and Moynagh, Paul N. (2000) Loss of IκB-β Is Associated with Prolonged NF-κB Activity in Human Glial Cells. Journal of Biological Chemistry, 275 (51). pp. 39996-40002. ISSN 0021-9258

    Bourke, Emer and Moynagh, Paul N. (1999) Antiinflammatory Effects of Glucocorticoids in Brain Cells, Independent of NF-kB. Journal of Immunology, 163. pp. 2113-2119. ISSN 0022-1767

    Bowie, Andrew G. and Moynagh, Paul N. and O'Neill, Luke A.J. (1997) Lipid Peroxidation Is Involved in the Activation of NF-kB by Tumor Necrosis Factor but Not Interleukin-1 in the Human Endothelial Cell Line ECV304. Journal of Biological Chemistry, 272 (41). pp. 25941-25950. ISSN 0021-9258

    Brady, Karen and Fitzgerald, Stephen and Ingvarsson, Sigurdur and Borrebaeck, Carl A.K. and Moynagh, Paul N. (2001) CD40 Employs p38 MAP Kinase in IgE Isotype Switching. Biochemical and Biophysical Research Communications, 289 (1). pp. 276-281. ISSN 0006-291X

    Brady, Kevin J. and Fitzgerald, Stephen and Moynagh, Paul N. (2000) Tumour-necrosis-factor-receptor-associated factor 6, NF-jB-inducing kinase and IjB kinases mediate IgE isotype switching in response to CD40. Biochemical Journal, 350. pp. 735-740. ISSN 0264-6021

    Brady, Miriam T. (2001) Regulation and Effector Function of TH1 and TH2 Cells in Immunity to Bordetella Pertussis. PhD thesis, National University of Ireland Maynooth.

    Brady, Miriam T. and Mahon, Bernard P. and Mills, Kingston H.G. (1998) Pertussis infection and vaccination induces Th1 cells. Immunology Today, 19 (11). p. 534. ISSN 0167-5699

    Braus, Gerhard H. and Irniger, Stefan and Bayram, Ozgur (2010) Fungal development and the COP9 signalosome. Current Opinion in Microbiology, 13 (6). pp. 672-676. ISSN 1369-5274

    Breen, Conor and Martin, Darren S. and Ma, Hui and McQuaid, Kate and O'Kennedy, Richard and Findlay, John B. C. (2015) Production of Functional Human Vitamin A Transporter/RBP Receptor (STRA6) for Structure Determination. PLoS ONE, 10 (3). e0122293. ISSN 1932-6203

    Breen, Conor and Raverdeau, Mathilde and Voorheis, H. Paul (2016) Development of a quantitative fluorescence-based ligand-binding assay. Scientific Reports, 6 (25769). ISSN 2045-2322

    Brennan, Marc and Thomas, David Y. and Whiteway, Malcolm and Kavanagh, Kevin (2002) Correlation between virulence of Candida albicans mutants in mice and Galleria mellonella larvae. FEMS Immunology and Medical Microbiology, 34 (2). pp. 153-157. ISSN 0928-8244

    Brennan, Ruth (2013) Investigating the cellular localisation of DEAD box helicase DDX3. PhD thesis, National University of Ireland Maynooth.

    Browne, John and Tunnacliffe, Alan and Burnell, Ann (2002) Plant desiccation gene found in a nematode. Nature, 416. p. 38.

    Browne, John A. and Dolan, Katharine M. and Tyson, Trevor and Goyal, Kshamata and Tunnacliffe, Alan and Burnell, Ann (2004) Dehydration-Specific Induction of Hydrophilic Protein Genes in the Anhydrobiotic Nematode Aphelenchus avenae. Eukaryotic Cell, 3 (4). pp. 966-975.

    Browne, Niall and Hackenberg, Frauke and Streciwilk, Wojciech and Tacke, Matthias and Kavanagh, Kevin (2014) Assessment of in vivo antimicrobial activity of the carbene silver(I) acetate derivative SBC3 using Galleria mellonella larvae. Biometals, 27 (4). pp. 745-752. ISSN 0966-0844

    Browne, Niall and Heelan, Michelle and Kavanagh, Kevin (2013) An analysis of the structural and functional similarities of insect hemocytes and mammalian phagocytes. Virulence, 4 (4). pp. 1-7. ISSN 2150-5594

    Browne, Niall and Kavanagh, Kevin (2013) Developing the potential of using Galleria mellonella larvae as models for studying brain infection by Listeria monocytogenes. Virulence, 4 (4). pp. 271-272. ISSN 2150-5594

    Browne, Niall and Surlis, Carla and Kavanagh, Kevin (2014) Thermal and physical stresses induce a short-term immune priming effect in Galleria mellonella larvae. Journal of Insect Physiology, 63. pp. 21-26. ISSN 0022-1910

    Browne, Niall and Surlis, Carla and Maher, Amie and Gallagher, Clair and Carolan, James C. and Clynes, Martin and Kavanagh, Kevin (2015) Prolonged pre-incubation increases the susceptibility of Galleria mellonella larvae to bacterial and fungal infection. Virulence, 6 (5). pp. 458-465. ISSN 2150-5594

    Bruni, Daniela and Sebastia, Jordi and Dunne, Susan and Schroeder, Martina and Butler, Marion P. (2013) A Novel IRAK1–IKKԑ Signaling Axis Limits the Activation of TAK1–IKKb Downstream of TLR3. Journal of Immunology, 190. pp. 2844-2856. ISSN 0022-1767

    Buckley, Stephen and Mahon, Bernard P. (2010) Bonus points for maths. The Irish Times, Oct. (12th).

    Burbridge, Emma and Kjærsgaard Rasmussen, Søren and Bernier, Francois and Kaare Kristensen, Brian and McCabe, Paul Francis and Dix, Philip (2014) Altered Activity of Peroxidase and Oxalate Oxidase Influences Lignification in Transgenic Tobacco. The Open Plant Science Journal, 2014, 8, 1-8, 8. pp. 1-8. ISSN 1874-2947

    Burnell, Ann and Dowds, Barbara C.A. (1996) The Genetic Improvement of Entomopathogenic Nematodes and Their Symbiont Bacteria: Phenotypic Targets, Genetic Limitations and an Assessment of Possible Hazards. Biocontrol Science and Technology, 6. pp. 435-447.

    Burnell, Ann and Houthoofd, Koen and O'Hanlon, Karen and Vanfleteren, Jacques R. (2005) Alternate metabolism during the dauer stage of the nematode Caenorhabditis elegans. Experimental Gerontology, 40. pp. 850-856.

    Burnell, Ann and O'Halloran, Damien M. (2004) Chemoreceptor genes: what can we learn from Caenorhabditis elegans and how can we apply this information to studies on other nematodes? Nematology Monographs & Perspectives, 2. pp. 707-714.

    Burnell, Ann and Stock, S. Patricia (2000) Heterorhabditis, Steinernema and their bacterial symbionts - lethal pathogens of insects. Nematology, 2 (1). pp. 31-42.

    Burns, Claire and Geraghty, Rachel and Neville, Claire and Murphy, Alan and Kavanagh, Kevin and Doyle, Sean (2005) Identification, cloning, and functional expression of three glutathione transferase genes from Aspergillus fumigatus. Fungal Genetics and Biology, 42 (4). pp. 319-327. ISSN 1087-1845

    Busch, Silke and Schwier, Elke U. and Nahlik, Krystyna and Bayram, Ozgur and Helmstaedt, Kerstin and Draht, Oliver W. and Krappmann, Sven and Valerius, Oliver and Lipscomb, William N. and Braus, Gerhard H. (2007) An eight-subunit COP9 signalosome with an intact JAMM motif is required for fungal fruit body formation. Eukaryotic Cell, 104 (19). pp. 8089-8094. ISSN 1535-9778

    Butler, Geraldine and Rasmussen, Matthew D. and Lin, Michael F. and Santos, Manuel A. and Sakthikumar, Sharadha and Munro, Carol A. and Rheinbay, Esther and Grabherr, Manfred and Forche, Anja and Reedy, Jennifer L. and Agrafioti, Ino and Arnaud, Martha B. and Bates, Steven and Brown, Alistair J.P. and Brunke, Sascha and Costanzo, Maria C. and Fitzpatrick, David A. and de Groot, Piet W. J. and Harris, David and Hoyer, Lois L. and Hube, Bernhard and Klis, Frans M. and Kodira, Chinnappa and Lennard, Nicola and Logue, Mary E. and Martin, Ronny and Neiman, Aaron M. and Nikolaou, Elissavet and Quail, Michael A. and Quinn, Janet and Santos, Maria C. and Schmitzberger, Florian F. and Sherlock, Gavin and Shah, Prachi and Silverstein, Kevin A.T. and Skrzypek, Marek S. and Soll, David and Staggs, Rodney and Stansfield, Ian and Stumpf, Michael P.H. and Sudbery, Peter E. and Srikantha, Thyagarajan and Zeng, Qiandong and Berman, Judith and Berriman, Matthew and Heitman, Joseph and Gow, Neil A.R. and Lorenz, Michael C. and Birren, Bruce W. and Kellis, Manolis and Cuomo, Christina A. (2009) Evolution of pathogenicity and sexual reproduction in eight Candida genomes. Nature, 459. pp. 657-662. ISSN 1476-4687

    Butler, M.P. and O'Connor, J.J. and Moynagh, Paul N. (2004) Dissection of Tumor-Necrosis Factor-α Inhibition of Longterm Potentiation (LTP) Reveals a p38 Mitogen-Activated Protein Kinase-Dependent Mechanism which Maps to Early - But Not Late-Phase LTP. Neuroscience, 124 (2). pp. 319-326. ISSN 0306-4522

    Butler, Marion P. and Hanly, Jennifer A. and Moynagh, Paul N. (2007) Kinase-active Interleukin-1 Receptor-associated Kinases Promote Polyubiquitination and Degradation of the Pellino Family : direct evidence for PELLINO proteins being ubiquitin-protein isopeptide ligases. Journal of Biological Chemistry, 282 (41). pp. 29729-29737. ISSN 0021-9258

    Butler, Marion P. and Hanly, Jennifer A. and Moynagh, Paul N. (2005) Pellino3 Is a Novel Upstream Regulator of p38 MAPK and Activates CREB in a p38-dependent Manner. Journal of Biological Chemistry, 280 (30). pp. 27759-27768. ISSN 0021-9258

    Butler, Marion P. and Moynagh, Paul N. and O'Connor, John J. (2002) Methods of detection of the transcription factor NF-kB in rat hippocampal slices. Journal of Neuroscience Methods, 119 (2). pp. 185-190. ISSN 0165-0270

    Byrne, Laura A. (2010) Analytical assessment of peptide-mental interactions and subsequent stability. PhD thesis, National University of Ireland Maynooth.

    C

    Caboni, Laura and Kinsella, Gemma K. and Blanco, Fernando and Fayne, Darren and Jagoe, William M. and Carr, Miriam and Williams, D. Clive and Meegan, Mary J. and Lloyd, David G. (2012) “True” Antiandrogens : Selective Non-Ligand-Binding Pocket Disruptors of Androgen Receptor−Coactivator Interactions: Novel Tools for Prostate Cancer. Journal of Medicinal Chemistry, 55. pp. 1635-1644. ISSN 0022-2623

    Cahill, Emer (2014) The Role of Mesenchymal Stromal Cells in Inflammation and Treatment of Pulmonary Fibrosis. PhD thesis, National University of Ireland Maynooth.

    Cahill, Emer and Kennelly, Helen and Carty, Fiona and Mahon, Bernard P. and English, Karen (2016) Hepatocyte Growth Factor Is Required for Mesenchymal Stromal Cell Protection Against Bleomycin-Induced Pulmonary Fibrosis. Stem Cells Translational Medicine, 5. pp. 1307-1318. ISSN 2157-6564

    Cahill, Emer and Tobin, Laura M. and Carthy, Fiona and Mahon, Bernard P. and English, Karen (2015) Jagged-1 is required for the expansion of CD4+ CD25+ FoxP3+ regulatory T cells and tolerogenic dendritic cells by murine mesenchymal stromal cells. Stem Cell Research and Therapy, 6 (19). ISSN 1757-6512

    Cahill, Laura A. (2016) An Investigation of The Effect of Hypoxic Culture on Mesenchymal Stromal Cell Immunomodulation and Biodistribution in-vivo. PhD thesis, National University of Ireland Maynooth.

    Campbell, Lahcen I. (2012) A cause for consilience: Utilizing multiple genomic data types to resolve problematic nodes within Arthropoda and Ecdysozoa. PhD thesis, National University of Ireland Maynooth.

    Campos-Sandoval, Jose Angel and Redondo, Clara and Kinsella, Gemma K. and Pal, Akos and Jones, Geraint and Eyre, Gwen S. and Hirst, Simon C, and Findlay, John B. C. (2011) Fenretinide Derivatives Act as Disrupters of Interactions of Serum Retinol Binding Protein (sRBP) with Transthyretin and the sRBP Receptor. Journal of Medicinal Chemistry, 54. pp. 4378-4387. ISSN 0022-2623

    Canavan, Mary and McCarthy, Ciara and Ben Larbi, Nadia and Dowling, Jennifer and Collins, Laura and O'Sullivan, Finbarr and Hurley, Grainne and Murphy, Carola and Quinlan, Aoife and Moloney, Gerry and Darby, Trevor and MacSharry, John and Kagechika, Hiroyuki and Moynagh, Paul N. and Melgar, Silvia and Loscher, Christine E. (2013) Activation of liver X receptor suppresses the production of the IL-12 family of cytokines by blocking nuclear translocation of NF-kBp50. Innate Immunity, 20 (7). pp. 675-687. ISSN 1753-4259

    Cantas, L. and Shah, Syed Q.A. and Cavaco, L.M. and Manaia, Célia M. and Walsh, Fiona and Popowska, Magdalena and Garelick, H. and Bürgmann, H. and Sørum, Henning (2013) A brief multi-disciplinary review on antimicrobial resistance in medicine and its linkage to the global environmental microbiota. Frontiers in Microbiology, 4 (96). ISSN 1664-302X

    Carberry, Stephen and Doyle, Sean (2007) Proteomic studies in biomedically and industrially relevant fungi. Cytotechnology, 53 (1-3). pp. 95-100. ISSN 0920-9069

    Carberry, Stephen and Molloy, Emer and Hammel, Stephen and O'Keefe, Grainne and Jones, Gary W. and Kavanagh, Kevin and Doyle, Sean (2012) Gliotoxin effects on fungal growth: Mechanisms and exploitation. Fungal Genetics and Biology, 49 (4). pp. 302-312. ISSN 1087-1845

    Carberry, Stephen and Neville, Claire M. and Kavanagh, Kevin and Doyle, Sean (2006) Analysis of major intracellular proteins of Aspergillus fumigatus by MALDI mass spectrometry: Identification and characterisation of an elongation factor 1B protein with glutathione transferase activity. Biochemical and Biophysical Research Communications, 341 (4). pp. 1096-1104. ISSN 0006-291X

    Carberry, Steven (2014) Proteomic Profiling of the mdx Animal Model for Duchenne Muscular Dystrophy. PhD thesis, National University of Ireland Maynooth.

    Carberry, Steven and Brinkmeier, Heinrich and Zhang, Yaxin and Winkler, Claudia K. and Ohlendieck, Kay (2013) Comparative proteomic profiling of soleus, extensor digitorum longus, flexor digitorum brevis and interosseus muscles from the mdx mouse model of Duchenne muscular dystrophy. International Journal of Molecular Medicine, 32 (374). pp. 544-556. ISSN 1107-3756

    Carberry, Steven and Zweyer, Margit and Swandulla, Dieter and Ohlendieck, Kay (2013) Application of Fluorescence Two-Dimensional Difference In-Gel Electrophoresis as a Proteomic Biomarker Discovery Tool in Muscular Dystrophy Research. Biology, 2. pp. 1438-1464. ISSN 2079-7737

    Carberry, Steven and Zweyer, Margit and Swandulla, Dieter and Ohlendieck, Kay (2014) Comparative proteomic analysis of the contractile-protein-depleted fraction from normal versus dystrophic skeletal muscle. Analytical Biochemistry, 446. pp. 108-115. ISSN 0003-2697

    Carberry, Steven and Zweyer, Margit and Swandulla, Dieter and Ohlendieck, Kay (2012) Profiling of Age-Related Changes in the Tibialis Anterior Muscle Proteome of the mdx Mouse Model of Dystrophinopathy. Journal of Biomedicine and Biotechnology, 2012 (691641). ISSN 1110-7243

    Carberry, Steven and Zweyer, Margit and Swandulla, Dieter and Ohlendieck, Kay (2012) Proteomics reveals drastic increase of extracellular matrix proteins collagen and dermatopontin in the aged mdx diaphragm model of Duchenne muscular dystrophy. International Journal of Molecular Medicine, 30 (2). pp. 229-234. ISSN 1107-3756

    Carolan, James C. and Murray, Tomas E. and Fitzpatrick, Una and Crossley, John and Schmidt, Hans and Cederberg, Bjorn and McNally, Luke and Paxton, Robert J. and Williams, Paul H. and Brown, Mark J. F. (2012) Colour Patterns Do Not Diagnose Species: Quantitative Evaluation of a DNA Barcoded Cryptic Bumblebee Complex. PLoS ONE, 7 (1). e29251. ISSN 1932-6203

    Carolan, James C. and Caragea, Doina and Reardon, Karen T. and Mutti, Navdeep S. and Dittmer, Neal and Pappan, Kirk and Cui, Feng and Castaneto, Marisol and Poulain, Julie and Dossat, Carole and Tagu, Denis and Reese, John C. and Reeck, Gerald R. and Wilkinson, Thomas L. and Edwards, Owain R. (2011) Predicted Effector Molecules in the Salivary Secretome of the Pea Aphid (Acyrthosiphon pisum): A Dual Transcriptomic/Proteomic Approach. Journal of Proteome Research, 10 (4). pp. 1505-1518. ISSN 1535-3893

    Carolan, James C. and Fitzroy, Carol I.J. and Ashton, Peter D. and Douglas, Angela E. and Wilkinson, Thomas L. (2009) The secreted salivary proteome of the pea aphid Acyrthosiphon pisum characterised by mass spectrometry. Proteomics, 9 (9). pp. 2457-2467. ISSN 1615-9853

    Carolan, James C. and Hook, I.L.I. and Walsh, J.J. and Hodkinson, Trevor R. (2002) Using AFLP Markers for Species Differentiation and Assessment of Genetic Variability of in Vitro-Cultured Papaver Bracteatum (Section Oxytona). In Vitro Cellular & Developmental Biology - Plant, 38 (3). pp. 300-307.

    Carolan, James C. and Hook, Ingrid L.I. and Chanse, Mark W. and Kadereit, Joachim W. and Hodkinson, Trevor R. (2006) Phylogenetics of Papaver and Related Genera Based on DNA Sequences from ITS Nuclear Ribosomal DNA and Plastid trnL Intron and trnL–F Intergenic Spacers. Annals of Botany, 98 (1). pp. 141-155. ISSN 0305-7364

    Carr, Derek P. (2012) Assessment of alternative uses for lignocellulosic waste products. PhD thesis, National University of Ireland Maynooth.

    Carr, Michael J. and McCormack, Grace P. and Crowley, Brendan (2004) Genetic Variation in Clinical Varicella-Zoster Virus Isolates Collected in Ireland Between 2002 and 2003. Journal of Medical Virology, 73 (1). pp. 131-136.

    Carton, Robert (2017) Next generation sequencing technology and phylogenomics enhance the resolution of deep node phylogenies: A study of the Protostomia. PhD thesis, National University of Ireland Maynooth.

    Carty, Fiona and Corbett, Jennifer and Cunha, João Paulo M. C. M. and Reading, James and Tree, Timothy and Ting, Anthony E. and Stubblefield, Samatha R. and English, Karen (2018) Multipotent Adult Progenitor Cells Suppress T Cell Activation in In Vivo Models of Homeostatic Proliferation in a Prostaglandin E2-Dependent Manner. Frontiers in Immunology, 6 (645). ISSN 1664-3224

    Carty, Fiona and Mahon, Bernard P. and English, Karen (2017) The influence of macrophages on mesenchymal stromal cell therapy: passive or aggressive agents? Clinical and Experimental Immunology, 188. pp. 1-11. ISSN 1365-2249

    Carty, Michael and Goodbody, Rory and Schröder, Michael and Stack, Julianne and Moynagh, Paul N. and Bowie, Andrew G. (2006) The human adaptor SARM negatively regulates adaptor protein TRIF–dependent Toll-like receptor signaling. Nature Immunology, 7 (10). pp. 1074-1081. ISSN 1529-2908

    Casey, D.G. and Burnell, Ann (2001) The isolation of microsatellite loci in the Mediterranean fruitfly Ceratitis capitata (Diptera: Tephritidae) using a biotin/streptavidin enrichment technique. Molecular Ecology Notes, 1. pp. 120-122.

    Casey, Orla M. and Fitzpatrick, Richard and McInerney, James O. and Morris, Dermot G. and Powell, Richard and Sreenan, Joseph M. (2004) Analysis of gene expression in the bovine corpus luteum through generation and characterisation of 960 ESTs. Biochimica et Biophysica Acta, 1679 (1). pp. 10-17.

    Chapman, Kathryn L. and Findlay, John B. C. (2013) The melanocortin 4 receptor: Oligomer formation, interaction sites and functional significance. Biochimica et Biophysica Acta, 1828. pp. 535-542. ISSN 0005-2736

    Chikkala, Veera R.N. and Nugent, Gregory D. and Dix, Philip and Stevenson, Trevor W. (2009) 'Regeneration from leaf explants and protoplasts of Brassica oleracea var. botrytis (cauliflower). Scientia Horticulturae, 119. pp. 330-334. ISSN 0304-4238

    Christmann, Martin and Schmaler, Tilo and Gordon, Colin and Huang, Xiachua and Bayram, Ozgur and Schinke, Josua and Stumpf, Sina (2013) Control of Multicellular Development by the Physically Interacting Deneddylases DEN1/DenA and COP9 Signalosome. PLoS Genetics, 9 (2). e1003275. ISSN 1553-7390

    Clarke, Michael and Lohan, Amanda and Liu, Bernard and Lagkouvardos, Ilias and Roy, Scott and Zafar, Nikhat and Bertelli, Claire and Schilde, Christina and Kianianmomeni, Arash and Burglin, Thomas R. and Frech, Christian and Turcotte, Bernard and Kopec, Klaus O. and Synnott, John M. and Choo, Caleb and Paponov, Ivan and Finkler, Aliza and Soon Heng Tan, Chris and Hutchins, Andrew P. and Weinmeier, Thomas and Ratteri, Thomas and Chu, Jeffery SC and Gimenez, Gregory and Irimia, Manuel and Rigden, Daniel J. and Fitzpatrick, David A. and Lorenzo-Morales, Jacob and Baterman, Alex and Chiu, Cheng-Hsun and Tang, Petrus and Hegemann, Peter and Fromm, Hillel and Raoult, Didier and Greub, Gilbert and Miranda-Saavedra, Diego and Chen, Nansheng and Nash, Piers and Ginger, Michael L. and Horn, Matthias and Schaap, Pauline and Caler, Lis and Loftus, Brendan J. (2013) Genome of Acanthamoeba castellanii highlights extensive lateral gene transfer and early evolution of tyrosine kinase signaling. Genome Biology, 14 (R11). ISSN 1465-6906

    Cluxton, Christopher and Caffrey, Brian E. and Kinsella, Gemma K. and Moynagh, Paul N. and Fares, Mario A. and Fallon, Padraic G. (2015) Functional conservation of an ancestral Pellino protein in helminth species. Scientific Reports, 5 (11687). ISSN 2045-2322

    Codoñer, Francisco M. and O'Dea, Shirley and Fares, Mario A. (2008) Reducing the false positive rate in the non-parametric analysis of molecular coevolution. BMC Evolutionary Biology, 8 (106). ISSN 1471-2148

    Coen, Enrico S. and Nugent, Jacqueline M. (1994) Evolution of flowers and inflorescences. Development, Suppl.. pp. 107-116. ISSN 0950-1991

    Coen, Enrico S. and Nugent, Jacqueline M. and Luo, Da and Bradley, Desmond and Cubas, Pilar and Chadwick, Mark and Copsey, Lucy and Carpenter, Rosemary (1995) Evolution of floral symmetry. Philosophical Transactions: Biological Sciences, 350 (1331). pp. 35-38. ISSN 0962-8436

    Colabardini, Ana Christina and Humanes, Ana Carolina and Fagundes Gouvea, Paula and Savoldi, Marcela and Goldman, Maria Helena S. and von Zeska Kress, Marcia Regina and Bayram, Ozgur and Gomes, Marcelo Damario and Braus, Gerhard H. and Goldman, Gustavo H. (2012) Molecular characterization of the Aspergillus nidulans fbxA encoding an F-box protein involved in xylanase induction. Fungal Genetics and Biology, 49 (2). pp. 130-140. ISSN 1087-1845

    Colgan, Thomas J. and Carolan, James C. and Bridgett, Stephen J. and Sumner, Seirian and Blaxter, Mark L. and Brown, Mark J.F. (2011) Polyphenism in social insects: insights from a transcriptome-wide analysis of gene expression in the life stages of the key pollinator, Bombus terrestris. BMC Genomics, 12 (623). pp. 1-20. ISSN 1471-2164

    Collin, Hamish A. and Dix, Philip (1990) Culture Systems and Selection Procedures. In: Plant Cell Line Selection. VCH, pp. 3-18. ISBN 3-527-27963-6

    Collins, Cassandra (2013) A Genomic and Proteomic Investigation of the Plant Pathogen Armillaria mellea: Buried Treasure or Hidden Threat? PhD thesis, National University of Ireland Maynooth.

    Collins, Peter R. and Stack, Colin M. and O'Neill, Sandra M. and Doyle, Sean and Ryan, Thecla and Brennan, Gerard P. and Mousley, Angela and Stewart, Michael and Maule, Aaron G. and Dalton, John P. and Donnelly, Sheila (2004) Cathepsin L1, the Major Protease Involved in Liver Fluke (Fasciola hepatica) Virulence. Journal of Biological Chemistry, 279 (17). pp. 17038-17046. ISSN 0021-9258

    Collins, Aideen S. and Ahmed, Suaad and Napoletano, Silvia and Schroeder, Martina and Johnston, James A. and Hegarty, John E. and O'Farrelly, Cliona and Stevenson, Nigel J. (2014) Hepatitis C virus (HCV)-induced suppressor of cytokine signaling (SOCS) 3 regulates proinflammatory TNF-α responses. Journal of Leukocyte Biology, 96 (2). pp. 255-263. ISSN 0741-5400

    Collins, Cassandra and Hurley, Rachel and Almutlagah, Nada and O'Keeffe, Grainne and Keane, Thomas M. and Fitzpatrick, David A. and Owens, Rebecca A. (2017) Proteomic Characterization of Armillaria mellea Reveals Oxidative Stress Response Mechanisms and Altered Secondary Metabolism Profiles. Microorganisms, 5 (3). p. 60. ISSN 2076-2607

    Collins, Cassandra and Keane, Thomas M. and Turner, Daniel J. and O'Keefe, Grainne and Fitzpatrick, David A. and Doyle, Sean (2013) Genomic and Proteomic Dissection of the Ubiquitous Plant Pathogen, Armillaria mellea: Toward a New Infection Model System. Journal of Proteome Research, 12. pp. 2552-2570. ISSN 1535-3893

    Cooney, David (2011) Possible Interacting Proteins for Retinol Binding Protein and Cellular Retinol Binding Protein. Masters thesis, National University of Ireland Maynooth.

    Corcoran, A. and Doyle, Sean (2006) Human Parvovirus B19: Molecular Virology, Clinical Features, Prevalence, Diagnosis and Control. In: Congenital and Other Related Infectious Diseases of the Newborn. Perspectives in Medical Virology (13). Elsevier, pp. 173-209. ISBN 9780444520746

    Corcoran, Amanda and Mahon, Bernard P. and Doyle, Sean (2004) B Cell Memory Is Directed toward Conformational Epitopes of Parvovirus B19 Capsid Proteins and the Unique Region of VP1. Journal of Infectious Diseases, 189 (10). pp. 1873-1880. ISSN 0022-1899

    Corcoran, A. and Crowley, B. and Dewhurst, C. and Pizer, B.L. and Doyle, Sean (2006) Establishment of Functional B Cell Memory Against Parvovirus B19 Capsid Proteins May be Associated With Resolution of Persistent Infection. Journal of Medical Virology, 78 (1). pp. 125-128. ISSN 0146-6615

    Corcoran, A. and Kerr, S. and Elliott, G. and Koppelman, M. and Doyle, Sean (2007) Improved detection of acute parvovirus B19 infection by immunoglobulin M EIA in combination with a novel antigen EIA. Vox Sanguinis, 96 (3). pp. 216-222. ISSN 0042-9007

    Corcoran, Amanda and Doyle, Sean and Allain, J.P. and Candotti, D. and Parsyan, A. (2005) Letter to the Editor Evidence of Serological Cross-Reactivity between Genotype 1 and Genotype 3 Erythrovirus Infections. Journal of Virology, 79 (8). pp. 5238-5239.

    Corcoran, Amanda and Doyle, Sean and Waldron, David and Nicholson, Alfred and Mahon, Bernard P. (2000) Impaired Gamma Interferon Responses against Parvovirus B19 by Recently Infected Children. Journal of Virology, 74 (21). pp. 9903-9910. ISSN 0022-538X

    Costello, Anne and Herbert, Gillian and Fabunmi, Lydia and Schaffer, Kirsten and Kavanagh, Kevin and Caraher, Emma M. and Callaghan, Maire and McClean, Siobhan (2011) Virulence of an emerging respiratory pathogen, genus Pandoraea, in vivo and its interactions with lung epithelial cells. Journal of Medical Microbiology, 60 (3). pp. 289-299. ISSN 0022-2615

    Cotter, Gary and Doyle, Sean and Kavanagh, Kevin (2000) Development of an insect model for the in vivo pathogenicity testing of yeasts. FEMS Immunology and Medical Microbiology, 27 (2). pp. 163-169. ISSN 0928-8244

    Cotter, Gary and Kavanagh, Kevin (2000) Adherence mechanisms of Candida albicans. British journal of biomedical science, 57 (3). pp. 241-249. ISSN 0967-4845

    Cotter, Gary and Verhaegen, S. and Clynes, M. and Kavanagh, Kevin (1997) Membrane changes associated with the early stages of apoptosis in HEp-2 cells decrease susceptibility to adherence by Candida albicans. Journal of Medical and Veterinary Mycology, 35 (3). pp. 219-223. ISSN 0268-1218

    Cotter, Gary and Wheedle, Roisin and Kavanagh, Kevin (1998) Monoclonal antibodies directed against extracellular matrix proteins reduce the adherence of Candida albicans to HEp-2 cells. Mycopathologia, 141 (3). pp. 137-142. ISSN 1573-0832

    Cotton, James A. and McInerney, James O. (2010) Eukaryotic genes of archaebacterial origin are more important than the more numerous eubacterial genes, irrespective of function. Proceedings of the National Academy of Sciences , 107 (40). pp. 17252-17255. ISSN 1091-6490

    Coughlan, A. and Scanlon, K. and Mahon, Bernard P. and Towler, M.R. (2010) Zinc and silver glass polyalkenoate cements: An evaluation of their antibacterial nature. Bio-Medical Materials and Engineering, 20 (2). pp. 99-106. ISSN 0959-2989

    Coughlan, Catherine A. and Chotirmall, Sanjay H. and Renwick, Julie and Hassan, Tidi and Low, Teck Boon and Bergsson, Gudmundur and Eshwika, Ahmed and Bennett, Kathleen and Dunne, Katie and Greene, Catherine M. and Gunaratnam, Cedric and Kavanagh, Kevin and Logan, Patrick M. and Murphy, Philip and Reeves, Emer P. and McElvaney, Noel G. (2012) The Effect of Aspergillus fumigatus Infection on Vitamin D Receptor Expression in Cystic Fibrosis. American Journal of Respiratory and Critical Care Medicine, 186 (10). pp. 999-1007. ISSN 1535-4970

    Coughlan, Gillian (2015) Studies on the novel detection and destruction of the enteroparasite Giardia lamblia and other veterinary problematic microorganisms examined under varying culture conditions. Masters thesis, National University of Ireland Maynooth.

    Coyle, Barry and Kinsella, Paula and McCann, Malachy and Devereux, Michael and O'Connor, Robert and Clynes, Martin and Kavanagh, Kevin (2004) Induction of apoptosis in yeast and mammalian cells by exposure to 1,10-phenanthroline metal complexes. Toxicology in Vitro, 18 (1). pp. 63-70.

    Coyle, Barry and Kavanagh, Kevin and McCann, Malachy and Devereux, Michael and Geraghty, Majella (2003) Mode of anti-fungal activity of 1,10-phenanthroline and its Cu(II), Mn(II) and Ag(I) complexes. Biometals, 16. pp. 321-329. ISSN 0966-0844

    Craig, W. and Gargano, Daniela and Scotti, Nunzia and Nguyen, T.T. and Lao, N.T. and Kavanagh, T.A. and Dix, Philip and Cardi, T. (2005) Direct gene transfer in potato: A comparison of particle bombardment of leaf explants and PEG-mediated transformation of protoplasts. Plant Cell Reports, 10. pp. 603-611. ISSN 0721-7714

    Craig, Wendy and Lenzi, Paolo and Scotti, Nunzia and De Palma, Monica and Saggese, Paola and Carbone, Virginia and McGrath Curran, Noreen and Magee, Alan M. and Medgyesy, Peter and Kavanagh, Tony A. and Dix, Philip and Grillo, Stefania and Cardi, Teodoro (2008) Transplastomic tobacco plants expressing a fatty acid desaturase gene exhibit altered fatty acid profiles and improved cold tolerance. Transgenic Research, 17 (5). pp. 769-782. ISSN 0962-8819

    Creaven, Bernadette and Egan, Denise and Kavanagh, Kevin and McCann, Malachy and Noble, Andy and Thati, Bhumika and Walsh, Maureen (2006) Synthesis, characterization and antimicrobial activity of a series of substituted coumarin-3-carboxylatosilver(1) complexes. Inorganica Chimica Acta, 359 (12). pp. 3976-3984.

    Creaven, Bernadette S. and Duff, Brian and Egan, Denise A. and Kavanagh, Kevin and Rosair, Georgina and Reddy Thangellaa, Venkat and Walsh, Maureen (2010) Anticancer and antifungal activity of copper(II) complexes of quinolin-2(1H)-one-derived Schiff bases. Inorganica Chimica Acta, 363 (14). pp. 4048-4058. ISSN 0020-1693

    Creaven, Bernadette S. and Egan, Denise A. and Karcz, Dariusz and Kavanagh, Kevin and McCann, Malachy and Mahon, Mary and Noble, Andy and Thati, Bhumika and Walsh, Maureen (2007) Synthesis, characterisation and antimicrobial activity of copper(II) and manganese(II) complexes of coumarin-6,7-dioxyacetic acid (cdoaH2) and 4-methylcoumarin-6,7-dioxyacetic acid (4-MecdoaH2): X-ray crystal structures of [Cu(cdoa)(phen)2] · 8.8H2O and [Cu(4-Mecdoa)(phen)2] · 13H2O (phen = 1,10-phenanthroline). Journal of Inorganic Biochemistry, 101 (8). pp. 1108-1119. ISSN 0162-0134

    Creaven, Bernadette S. and Egan, Denise A. and Kavanagh, Kevin and McCann, Malachy and Mahon, Mary and Noble, Andy and Thati, Bhumika and Walsh, Maureen (2005) Synthesis and antimicrobial activity of copper(II) and silver(I) complexes of hydroxynitrocoumarins: X-ray crystal structures of [Cu(hnc)2(H2O)2] Æ 2H2O and [Ag(hnc)] (hncH = 4-hydroxy-3-nitro-2H-chromen-2-one). Polyhedron, 24 (8). pp. 949-957. ISSN 0277-5387

    Creevey, C.J. and McInerney, J.O. (2005) Clann: investigating phylogenetic information through supertree analyses. Bioinformatics, 21 (3). pp. 390-392.

    Creevey, Christopher J. and Doerks, Tobias and Fitzpatrick, David A. and Raes, Jeroen and Bork, Peer (2011) Universally Distributed Single-Copy Genes Indicate a Constant Rate of Horizontal Transfer. PLoS ONE, 6 (8). ISSN 1932-6203

    Creevey, Christopher J. and Fitzpatrick, David A. and Philip, Gayle K. and Kinsella, Rhoda J. and O'Connell, Mary J. and Pentony, Melissa M. and Travers, Simon A. and Wilkinson, Mark and McInerney, James O. (2004) Does a tree-like phylogeny only exist at the tips in the prokaryotes? Proceedings of The Royal Society of London, Biology Series, 271 (1557). pp. 2551-2558.

    Cullen, Louise and O'Connor, Andrew and McCormack, Sarah and Owens, Rebecca A. and Holt, Giles S. and Collins, Cassandra and Callaghan, Maire and Doyle, Sean and Smith, Darren and Schaffer, Kirsten and Fitzpatrick, David A. and McClean, Siobhan (2018) The involvement of the low-oxygen-activated locus of Burkholderia cenocepacia in adaptation during cystic fibrosis infection. Scientific Reports, 8 (1). p. 13386. ISSN 2045-2322

    Culleton, Bridget A. and Lall, Patrick and Kinsella, Gemma K. and Doyle, Sean and McCaffrey, John G. and Fitzpatrick, David A. and Burnell, Ann (2014) A role for the Parkinson’s disease protein DJ-1 as a chaperone and antioxidant in the anhydrobiotic nematode Panagrolaimus superbus. Cell Stress & Chaperones, 20 (1). pp. 121-137. ISSN 1355-8145

    Culligan, Kevin and Banville, Niamh and Dowling, Paul and Ohlendieck, Kay (2002) Drastic reduction of calsequestrin-like proteins and impaired calcium binding in dystrophic mdx muscle. Journal of applied physiology, 92 (2). pp. 435-445. ISSN 8750-7587

    Culligan, Kevin and Glover, Louise and Dowling, Paul and Ohlendieck, Kay (2001) Brain dystrophin-glycoprotein complex: persistent expression of beta-dystroglycan, impaired oligomerization of Dp71 and up-regulation of utrophins in animal models of muscular dystrophy. BMC Cell Biology, 2 (2). ISSN 1471-2121

    Cumiskey, D. and Butler, M.P. and Moynagh, Paul N. and O'Connor, J.J. (2007) Evidence for a role for the group I metabotropic glutamate receptor in the inhibitory effect of tumor necrosis factor-α on long-term potentiation. Brain Research, 1136. pp. 13-19. ISSN 0006-8993

    Cummings, Michael P. and Nugent, Jacqueline M. and Olmstead, Richard G. and Palmer, Jeffrey D. (2003) Phylogenetic analysis reveals five independent transfers of the chloroplast gene rbcL to the mitochondrial genome in angiosperms. Current Genetics, 43 (2). pp. 131-138. ISSN 0172-8083

    Cummins, Carla A. (2011) A new method for identifying site-specific evolutionary rates and its applications. PhD thesis, National University of Ireland Maynooth.

    Cummins, E.P. and Berra, E. and Comerford, K.M. and Ginouves, A. and Fitzgerald, K.T. and Seeballuck, F. and Godson, C. and Nielsen, J.E. and Moynagh, Paul N. and Pouyssegur, J. and Taylor, C.T. (2006) Prolyl hydroxylase-1 negatively regulates IκB kinase-β, giving insight into hypoxia-induced NFκB activity. Proceedings of the National Academy of Sciences, 103 (48). pp. 18154-18159. ISSN 1091-6490

    Curran, Niamh and Griffin, Bryan D. and O'Toole, Daniel and Brady, Kevin J. and Fitzgerald, Stephen and Moynagh, Paul N. (2005) The Synthetic Cannabinoid R(+)WIN 55,212-2 Inhibits the Interleukin-1 Signaling Pathway in Human Astrocytes in a Cannabinoid Receptor-independent Manner. Journal of Biological Chemistry, 28 (43). pp. 35797-35806. ISSN 0021-9258

    Curran, Robert and Lenehan, Joanne and McCann, Malachy and Kavanagh, Kevin and Devereux, Michael and Egan, Denise A. and Clifford, Grace and Keane, Kevin and Creaven, Bernadette S. and McKee, Vickie (2007) [Ag2(aca)2]n and [Ag4(aca)4(NH3)2] (acaH = 9-anthracenecarboxylic acid): Synthesis, X-ray crystal structures, antimicrobial and anti-cancer activities. Inorganic Chemistry Communications, 10 (10). pp. 1149-1153. ISSN 1387-7003

    Cusack, Sarah (2010) Assessing the role of Hsp70 in prion propagation in Saccharomyces cerevisiae. PhD thesis, National University of Ireland Maynooth.

    Cuskelly, Daragh (2016) Developing Budding Yeast as a Cell Factory for Production of the Antioxidant Ergothioneine. Masters thesis, National University of Ireland Maynooth.

    D

    Dalton, John P. and O'Neill, Sandra M. and Stack, Colin M. and Collins, Peter R. and Walshe, Alan and Sekiya, Mary and Doyle, Sean and Mulcahy, Grace and Hoyle, Deborah and Khaznadji, Eric and Moire, Nathalie and Brennan, Gerard and Mousley, Angela and Kreshchenko, Natalia and Maule, Aaron G. and Donnelly, Sheila M. (2003) Fasciola hepatica cathepsin L-like proteases: biology, function, and potential in the development of first generation liver fluke vaccines. International Journal for Parasitology, 33 (11). pp. 1173-1181. ISSN 0020-7519

    Daly, P. and Kavanagh, Kevin (2002) Immobilization of Aspergillus fumigatus colonies in a soft agar matrix allows visualization of A549 cell detachment and death. Medical Mycology, 40 (1). pp. 27-33. ISSN 1232-986X

    Daly, Paul and Kavanagh, Kevin (2001) Pulmonary aspergillosis: Clinical presentation, diagnosis and therapy. British journal of biomedical science, 58 (3). pp. 197-205. ISSN 0967-4845

    Daly, Paul and Verhaegen, Steven and Clynes, Martin and Kavanagh, Kevin (1999) Culture filtrates of Aspergillus fumigatus induce different modes of cell death in human cancer cell lines. Mycopathologia, 146 (2). pp. 67-74. ISSN 0301-486X

    Dang, Xiaodong (2012) Application of High Resolution Melting analysis for haplotype detection in phylogeographic research and case studies of Arenaria ciliata, A. norvegica and Minuartia recurva (Caryophyllaceae). PhD thesis, National University of Ireland Maynooth.

    Davis, Carol (2011) The Glutathione S-Transferase GliG Mediates Gliotoxin Biosynthesis, not Self-Protection, in Aspergillus fumigatus: A Functional Genomic Investigation. PhD thesis, National University of Ireland Maynooth.

    Davis, Carol and Carberry, Stephen and Schrettl, Markus and Singh, Ishwar and Stephens, John C. and Barry, Sarah M. and Kavanagh, Kevin and Challis, Gregory L. and Brougham, Dermot and Doyle, Sean (2011) The Role of Glutathione S-Transferase GliG in Gliotoxin Biosynthesis in Aspergillus fumigatus. Chemistry and Biology, 18. pp. 542-552. ISSN 1074-5521

    Davis, Carol and Gordon, Natasha and Murphy, Sinead and Singh, Ishwar and Kavanagh, Kevin and Carberry, Stephen and Doyle, Sean (2011) Single-pot derivatisation strategy for enhanced gliotoxin detection by HPLC and MALDI-ToF mass spectrometry. Analytical and Bioanalytical Chemistry, 401 (8). pp. 2519-2529. ISSN 1618-2642

    Deane, C.R. and Fuller, M.P. and Dix, Philip (1995) Selection of hydroxyproline-resistant proline-accumulating mutants of cauliflower. C.R. Deane, M .P. Fuller' & P.J. Dix. Euphytica, 85. pp. 329-334.

    Deane, C.R. and Fuller, M.P. and Dix, Philip (1994) In vitro strategies for improvement of frost tolerance in cauliflower. Irish Journal of Agricultural and Food Research, 33. pp. 105-106. ISSN 07916833

    Deegan, Orla and Walshe, Kieran and Kavanagh, Kevin and Doyle, Sean (2003) Quantitative detection of C-reactive protein using phosphocholine-labelled enzyme or microspheres. Analytical Biochemistry, 312 (2). pp. 175-181. ISSN 0003-2697

    Delaney, Sarah and Murphy, Richard and Walsh, Fiona (2018) A Comparison of Methods for the Extraction of Plasmids Capable of Conferring Antibiotic Resistance in a Human Pathogen From Complex Broiler Cecal Samples. Frontiers in Microbiology, 9 (1731). ISSN 1664-302X

    Delgado, Josué and Owens, Rebecca A. and Asensio, Miguel A. and Núñez, Felix (2015) Impact of the antifungal protein PgAFP from Penicillium chrysogenum on the protein profile in Aspergillus flavus. Applied Microbiology and Biotechnology, 99 (20). pp. 8701-8715. ISSN 1432-0614

    Delgado, Josué and Owens, Rebecca A. and Doyle, Sean and Asensio, Miguel A. and Núñez, Felix (2016) Increased chitin biosynthesis contributes to the resistance of Penicillium polonicum against the antifungal protein PgAFP. Applied Microbiology and Biotechnology, 100 (1). pp. 371-383. ISSN 1432-0614

    Delgado, Josué and Owens, Rebecca A. and Doyle, Sean and Asensio, Miguel A. and Núñez, Felix (2016) Manuscript title: antifungal proteins from moulds: analytical tools and potential application to dry-ripened foods. Applied Microbiology and Biotechnology, 100 (16). pp. 6991-7000.

    Delgado, Josué and Owens, Rebecca A. and Doyle, Sean and Núñez, Felix and Asensio, Miguel A. (2017) Quantitative proteomics reveals new insights into calcium-mediated resistance mechanisms in Aspergillus flavus against the antifungal protein PgAFP in cheese. Food Microbiology, 66. pp. 1-10. ISSN 1095-9998

    Delobel, Arnaud and Graciet, Emmanuelle and Andreescu, Simona and Gontero, Brigitte and Halgand, Frederic and Laprevote, Olivier (2005) Mass spectrometric analysis of the interactions between CP12, a chloroplast protein, and metal ions: a possible regulatory role within a PRK/GAPDH/CP12 complex. Rapid Communications in Mass Spectrometry, 19 (22). pp. 3379-3388. ISSN 1097-0231

    Dempsey, Catherine M. and Griffin, Christine (2002) Phased activity in Heterorhabditis megidis infective juveniles. Parasitology, 124. pp. 605-613. ISSN 0031-1820

    Dempsey, Catherine M. and Griffin, Christine (2003) The infectivity and behaviour of exsheathed and ensheathed Heterorhabditis megidis infective juveniles. Nematology, 5 (1). pp. 49-53. ISSN 1388-5545

    Deslyper, Gwendoline and Colgan, Thomas J. and Cooper, Andrew J.R. and Holland, Celia V. and Carolan, James C. (2016) A Proteomic Investigation of Hepatic Resistance to Ascaris in a Murine Model. PLoS Neglected Tropical Diseases, 10 (8). ISSN 1935-2727

    Deslyper, Gwendoline and Holland, Celia V. and Colgan, Thomas J. and Carolan, James C. (2019) The liver proteome in a mouse model for Ascaris suum resistance and susceptibility: evidence for an altered innate immune response. Parasites & Vectors, 12 (402). ISSN 1756-3305

    Devereux, Michael and McCann, Malachy and O'Shea, Denis and Kelly, Rachel and Egan, Denise and Deegan, Carol and Kavanagh, Kevin and McKee, Vickie and Finn, Gregory J. (2004) Synthesis, antimicrobial activity and chemotherapeutic potential of inorganic derivatives of 2-(4’-thiazolyl)benzimazole {thiabendazole}: X-ray crystal structures of [Cu(TBZH)2Cl]Cl.H2O.EtOH and TBZH2NO3 (TBZH = thiabendazole). Journal of Inorganic Biochemistry, 98 (6). pp. 1023-1031. ISSN 0162-0134

    Diekmann, Kerstin and Hodkinson, Trevor R. and Wolfe, Kenneth H. and van den Bekerom, Rob Jozef Matheus and Dix, Philip and Barth, Susanne (2009) Complete Chloroplast Genome Sequence of a Major Allogamous Forage Species, Perennial Ryegrass (Lolium perenne L.). DNA Research, 16. pp. 165-176. ISSN 1340-2838

    Dillon, Aoife and Griffin, Christine (2008) Controlling the large pine weevil, Hylobius abietis, using natural enemies. COFORD Connects: Silviculture and Forest Management (15). pp. 1-8.

    Dillon, Aoife B. and Foster, Aileen and Williams, Christopher D. and Griffin, Christine (2012) Environmental safety of entomopathogenic nematodes – Effects on abundance, diversity and community structure of non-target beetles in a forest ecosystem. Biological Control, 63 (2). pp. 107-114. ISSN 1049-9644

    Dillon, Aoife B. and Ward, Declan and Downes, Martin and Griffin, Christine (2006) Suppression of the large pine weevil Hylobius abietis (L.) (Coleoptera: Curculionidae) in pine stumps by entomopathogenic nematodes with different foraging strategies. Biological Control, 38. pp. 217-226.

    Dillon, A.B. and Rolston, A.N. and Meade, Conor and Downes, Martin and Griffin, Christine (2008) Establishment, persistence, and introgression of entomopathogenic nematodes in a forest ecosystem. Ecological Applications, 18 (3). pp. 735-747. ISSN 1051-0761

    Dillon, Aoife B. and Downes, Martin and Ward, Declan and Griffin, Christine (2007) Optimizing application of entomopathogenic nematodes to manage large pine weevil, Hylobius abietis L. (Coleoptera:Curculionidae) populations developing in pine stumps, Pinus sylvestris. Biological Control, 40 (2). pp. 253-263. ISSN 1049-9644

    Dillon, Aoife B. and Moore, Colm P. and Downes, Martin and Griffin, Christine (2008) Evict or infect? Managing populations of the large pine weevil, Hylobius abietis, using a bottom–up and top–down approach. Forest Ecology and Management, 255 (7). pp. 2634-2642. ISSN 0378-1127

    Ding, Chen and Yin, Jun and Tovar, Edgar Mauricio Medina and Fitzpatrick, David A. and Higgins, Desmond G. and Thiele, Dennis J. (2011) The Cu regulon of the human fungal pathogen Cryptococcus neoformans H99: Cuf1 activates distinct genes in response to both Cu excess and deficiency. Molecular Microbiology, 81 (6). pp. 1560-1576. ISSN 0950-382X

    Dissmeyer, Nico and Graciet, Emmanuelle and Holdsworth, Michael J. and Gibbs, Daniel J. (2017) N-term 2017: Proteostasis via the N-terminus. Trends in Biochemical Sciences, 44 (4). pp. 293-295. ISSN 0167-7640

    Dissmeyer, Nico and Rivas, Susana and Graciet, Emmanuelle (2018) Life and death of proteins after protease cleavage: protein degradation by the N-end rule pathway. New Phytologist, 218 (3). pp. 929-935. ISSN 0028-646X

    Dix, I. and Burnell, Ann and Griffin, Christine and Joyce, S.A. and Nugent, M.J. (1992) The identification of biological species in the genus Heterorhabditis (Nematoda : Heterorhabditidae) by cross-breeding second-generation amphimictic adults. Parasitology, 104. pp. 509-518.

    Dix, Philip and Burbridge, E. and Diamond, M. and McCabe, P.F. (2006) Use of cell morphology to evaluate the effect of a peroxidase gene on cell death induction thresholds in tobacco. Plant Science, 171. pp. 138-146.

    Dix, Philip (1979) Cell Culture Manipulations as a potential breeding tool. In: Low Temperature Stress in Crop Plants. Academic Press, pp. 463-472. ISBN 0-12-460560-5

    Dix, Philip (1981) Cross-resistance in Cell Lines of Nicotians sylvestris Selected for Resistance to Individual Antibiotics. Annals of Botany, 48 (2). pp. 321-325.

    Dix, Philip (1981) Inheritance of Chloramphenicol Resistance, a Trait Selected in Cell Cultures of Nicotiana sylvestris. Speg. and Comes. Annals of Botany, 48 (2). pp. 315-319.

    Dix, Philip and Street, H.E. (1976) Selection of Plant Cell Lines with Enhanced Chilling Resistance. Annals of Botany, 40 (5). pp. 903-910.

    Dix, Philip (1993) Plant Tissue Culture Manual - Use of Chemical and Physical Mutagens In vitro. Manual. Kluwer Academic Publishers.

    Dix, Philip and Lao, Nga Thi and Kavanagh, Tony (1994) Controlling insect pests with bacterial genes. The Irish Scientist, 1. p. 28.

    Dix, Philip (1977) Chilling Resistance is not Transmitted Sexually in Plants Regenerated from Nicotiana sylvestris Cell Lines. Zeitschrift für Pflanzenphysiologie, 84 (3). pp. 223-226. ISSN 0044-328X

    Dix, Philip (1980) Environmental stress resistance: Selection in plant cell cultures. In: Plant Cell Cultures: Results and Perspectives. Developments in Plant Biology, 5 . Elsevier, Holland, pp. 83-86. ISBN 0-444-80081-6

    Dix, Philip (1993) The role of mutant cell lines in studies on environmental stress tolerance: an assessment. The Plant Journal, 3 (2). pp. 309-313. ISSN 0960-7412

    Dix, Philip and McLysaght, Una A. and Pearce, Roger S. (1984) The potential of cell cultures for the production of salt tolerant cultivars. In: Efficiency in Plant Breeding. Pudoc Wageningen, pp. 219-223.

    Dix, Philip and Pearce, R.S. (1981) Proline Accumulation in NaCI-resistant and Sensitive Cell Lines of Nicotiana sylvestris. Zeitschrift für Pflanzenphysiologie, 102 (3). pp. 243-248. ISSN 0044-328X

    Dix, Philip and Street, H.E. (1974) Effects of p-Flourophenylalanine(PFP)on the Growth of Cell Lines Differing in Ploidy and Derived from Nicotiana Sylvestris. Plant Science Letters, 3. pp. 283-288. ISSN 0304-4211

    Do, Thi Thuy and Tamames, Javier and Stedtfeld, Robert D. and Guo, Xueping and Murphy, Sinead and Tiedje, James M. and Walsh, Fiona (2018) Antibiotic Resistance Gene Detection in the Microbiome Context. Microbial Drug Resistance, 24 (5). pp. 542-546. ISSN 1076-6294

    Doherty, Aoife (2012) Increased genome sampling reveals novel insights into vertebrate molecular evolution. PhD thesis, National University of Ireland Maynooth.

    Doherty, Derek and Arnaiz, Blanca and Madrigal-Estebas, Laura and Todryk, Stephen and James, Tharappel C and Bond, Ursula (2006) A novel method to identify and characterise peptide mimotopes of heat shock protein 70-associated antigens. Journal of Immune Based Therapies and Vaccines, 4 (2). pp. 1-12.

    Dolan, K.M. and Jones, J.T. and Burnell, Ann (2002) Detection of changes occurring during recovery from the dauer stage in Heterorhabditis bacteriophora. Parasitology, 125. pp. 71-81.

    Dolan, Niamh and Gavin, Declan P. and Eshwika, Ahmed and Kavanagh, Kevin and McGinley, John and Stephens, John C. (2016) Synthesis, antibacterial and anti-MRSA activity, in vivo toxicity and a structure-activity relationship study of a quinoline thiourea. Bioorganic and Medicinal Chemistry Letters, 26 (2). pp. 630-635. ISSN 0960-894X

    Dolan, Niamh and McGinley, John and Stephens, John C. and Kavanagh, Kevin and Hurley, Daniel and Maher, Niall (2014) Synthesis, characterisation and antimicrobial studies of organotin(IV) complexes with 1,10-phenanthroline derivatives. Inorganica Chimica Acta, 409 (Part B). pp. 276-284. ISSN 0020-1693

    Dolan, Stephen (2015) Regulatory and self-protection implications of gliotoxin bisthiomethylation in Aspergillus fumigatus. PhD thesis, National University of Ireland Maynooth.

    Dolan, Stephen K. and Bock, Tobias and Hering, Vanessa and Owens, Rebecca A. and Jones, Gary W. and Blankenfeldt, Wulf and Doyle, Sean (2017) Structural, mechanistic and functional insight into gliotoxin bis-thiomethylation in Aspergillus fumigatus. Open Biology, 7 (2). ISSN 2046-2441

    Dolan, Stephen K. and O'Keefe, Grainne and Jones, Gary W. and Doyle, Sean (2015) Resistance is not futile: gliotoxin biosynthesis, functionality and utility. Trends in Microbiology, 23 (7). pp. 419-428. ISSN 0966-842X

    Dolan, Stephen K. and Owens, Rebecca A. and O'Keefe, Grainne and Hammel, Stephen and Fitzpatrick, David A. and Jones, Gary W. and Doyle, Sean (2014) Regulation of Nonribosomal Peptide Synthesis: bis-Thiomethylation Attenuates Gliotoxin Biosynthesis in Aspergillus fumigatus. Chemistry and Biology, 21 (8). pp. 999-2012. ISSN 1074-5521

    Dombrowski, Yvonne and O'Hagan, Thomas and Dittmer, Marie and Penalva, Rosana and Mayora, Sonia R. and Bankhead, Peter and Fleville, Samara and Eleftheriadis, George and Zhao, Chao and Naughton, Michelle and Hassan, Rachel and Moffatt, Jill and Falconer, John and Boyd, Amanda and Hamilton, Peter and Allen, Ingrid V. and Kissenpfennig, Adrien and Moynagh, Paul N. and Evergreen, Emma and Perbal, Bernard and Willaims, Anna C. and Ingram, Rebecca J. and Chan, Jonah R. and Franklin, Robin J.M. and Fitzgerald, Denise C. (2017) Regulatory T cells promote myelin regeneration in the Central Nervous System. Nature Neuroscience, 20. pp. 674-680. ISSN 1546-1726

    Donoghue, Pamela and Doran, Philip and Dowling, Paul and Ohlendieck, Kay (2005) Differential expression of the fast skeletal muscle proteome following chronic low-frequency stimulation. Biochimica et Biophysica Acta - Proteins and Proteomics, 1752 (2). pp. 166-176. ISSN 1570-9639

    Donoghue, Pamela and Doran, Philip and Wynne, Kieran and Federsen, Kasper and Dunn, Michael J. and Ohlendieck, Kay (2007) Proteomic profiling of chronic low-frequency stimulated fast muscle. Proteomics, 7 (18). pp. 3417-3430. ISSN 1615-9853

    Donoghue, Pamela and Staunton, Lisa and Mullen, Edel and Manning, Gwen and Ohlendieck, Kay (2010) DIGE analysis of rat skeletal muscle proteins using nonionic detergent phase extraction of young adult versus aged gastrocnemius tissue. Journal of Proteomics, 73 (8). pp. 1441-1453. ISSN 1874-3919

    Doran, Anthony Gerard (2013) Systems level investigation of the genetic basis of bovine muscle growth and development. PhD thesis, National University of Ireland Maynooth.

    Doran, Philip and Donoghue, Pamela and O'Connell, Kathleen and Gannon, Joan and Ohlendieck, Kay (2007) Proteomic profiling of pathological and aged skeletal muscle fibres by peptide mass fingerprinting (Review). International Journal of Molecular Medicine, 19 (4). pp. 547-564. ISSN 1107-3756

    Doran, Philip and Dowling, Paul and Donoghue, Pamela and Buffini, Maria and Ohlendieck, Kay (2006) Reduced expression of regucalcin in young and aged mdx diaphragm indicates abnormal cytosolic calcium handling in dystrophin-deficient muscle. Biochimica et Biophysica Acta - Proteins and Proteomics, 1764 (4). pp. 773-785. ISSN 1570-9639

    Doran, Philip and Dowling, Paul and Lohan, James and McDonnell, Karen and Poetsch, Stephan and Ohlendieck, Kay (2004) Subproteomics analysis of Ca2+-binding proteins demonstrates decreased calsequestrin expression in dystrophic mouse skeletal muscle. European Journal of Biochemistry, 271 (19). pp. 3943-3952. ISSN 0014-2956

    Doran, Philip and Gannon, Joan and O'Connell, Kathleen and Ohlendieck, Kay (2007) Aging skeletal muscle shows a drastic increase in the small heat shock proteins aB-crystallin/HspB5 and cvHsp/HspB7. European Journal of Cell Biology, 86 (10). pp. 629-640. ISSN 0171-9335

    Doran, Philip and Gannon, Joan and O'Connell, Kathleen and Ohlendieck, Kay (2007) Proteomic profiling of animal models mimicking skeletal muscle disorders. Proteomics Clinical Applications, 1 (9). pp. 1169-1184. ISSN 1862-8346

    Doran, Philip and Martin, Geraldine and Dowling, Paul and Jockusch, Harald and Ohlendieck, Kay (2006) Proteome analysis of the dystrophin-deficient MDX diaphragm reveals a drastic increase in the heat shock protein cvHSP. Proteomics, 6 (16). pp. 4610-4621. ISSN 1615-9853

    Doran, Philip and O'Connell, Kathleen and Gannon, Joan and Kavanagh, Marcella and Ohlendieck, Kay (2008) Opposite pathobiochemical fate of pyruvate kinase and adenylate kinase in aged rat skeletal muscle as revealed by proteomic DIGE analysis. Proteomics, 8 (2). pp. 364-377. ISSN 1615-9853

    Doran, Philip and Wilton, Steve D. and Fletcher, Sue and Ohlendieck, Kay (2009) Proteomic profiling of antisense-induced exon skipping reveals reversal of pathobiochemical abnormalities in dystrophic mdx diaphragm. Proteomics, 9 (3). pp. 671-685. ISSN 1615-9853

    Dowling, Paul and Clarke, Colin and Hennessy, Kim and Torralbo-Lopez, Beatriz and Ballot, Jo and Crown, John and Kiernan, Ingrid and O'Byrne, Kenneth J. and Kennedy, M. John and Lynch, Vincent and Clynes, Martin (2012) Analysis of acute-phase proteins, AHSG, C3, CLI, HP and SAA, reveals distinctive expression patterns associated with breast, colorectal and lung cancer. International Journal of Cancer, 131 (4). pp. 911-923. ISSN 0020-7136

    Dowling, Paul and Clynes, Martin (2011) Conditioned media from cell lines: A complementary model to clinical specimens for the discovery of diseasespecific biomarkers. Proteomics, 11 (4). pp. 794-804. ISSN 1615-9853

    Dowling, Paul and Culligan, Kevin and Ohlendieck, Kay (2002) Distal mdx muscle groups exhibiting up-regulation of utrophin and rescue of dystrophin-associated glycoproteins exemplify a protected phenotype in muscular dystrophy. Naturwissenschaften, 89 (2). pp. 75-78. ISSN 0028-1042

    Dowling, Paul and Doran, Philip and Lohan, James and Culligan, Kevin and Ohlendieck, Kay (2004) Naturally Protected Muscle Phenotypes: Development of Novel Treatment Strategies for Duchenne Muscular Dystrophy. Basic and applied myology : BAM, 14 (3). pp. 169-177. ISSN 1120-9992

    Dowling, Paul and Doran, Philip and Ohlendieck, Kay (2004) Drastic reduction of sarcalumenin in Dp427 (dystrophin of 427 kDa)-deficient fibres indicates that abnormal calcium handling plays a key role in muscular dystrophy. Biochemical Journal, 379 (Pt.2). pp. 479-488. ISSN 0264-6021

    Dowling, Paul and Holland, Ashling and Ohlendieck, Kay (2014) Mass Spectrometry-Based Identification of Muscle-Associated and Muscle-Derived Proteomic Biomarkers of Dystrophinopathies. Journal of Neuromuscular Diseases, 1 (1). pp. 15-40. ISSN 2214-3599

    Dowling, Paul and Lohan, James and Ohlendieck, Kay (2003) Comparative analysis of Dp427-deficient mdx tissues shows that the milder dystrophic phenotype of extraocular and toe muscle fibres is associated with a persistent expression of beta-dystroglycan. European Journal of Cell Biology, 82 (5). pp. 222-230. ISSN 0171-9335

    Dowling, Paul and Maurya, Priyanka and Meleady, Paula and Glynn, Sharon and Dowd, Andrew and Henry, Michael and Clynes, Martin (2007) Purification and Identification of a 7.6-kDa Protein in Media Conditioned by Superinvasive Cancer Cells. Anticancer Research, 27 (3A). pp. 1309-1317. ISSN 0250-7005

    Dowling, Paul and Meleady, Paula and Dowd, Andrew and Henry, Michael and Glynn, Sharon and Clynes, Martin (2007) Proteomic analysis of isolated membrane fractions from superinvasive cancer cells. Biochimica et Biophysica Acta - Proteins and Proteomics, 1774 (1). pp. 93-101. ISSN 1570-9639

    Dowling, Paul and O'Driscoll, Lorraine and Meleady, Paula and Henry, Michael and Roy, Shunil and Ballot, Jo and Moriarty, Michael and Crown, John and Clynes, Martin (2007) 2-D difference gel electrophoresis of the lung squamous cell carcinoma versus normal sera demonstrates consistent alterations in the levels of ten specific proteins. Electrophoresis, 28 (23). pp. 4302-4310. ISSN 0173-0835

    Dowling, Paul and O'Driscoll, Lorraine and O'Sullivan, Finbarr and Dowd, Andrew and Henry, Michael and Jeppesen, Per Bendix and Meleady, Paula and Clynes, Martin (2006) Proteomic screening of glucose-responsive and glucose non-responsive MIN-6 beta cells reveals differential expression of proteins involved in protein folding, secretion and oxidative stress. Proteomics, 6 (24). pp. 6578-6587. ISSN 1615-9853

    Dowling, Paul and Shields, William and Rani, Sweta and Meleady, Paula and Henry, Michael and Jeppesen, Per Bendix and O'Driscoll, Lorraine and Clynes, Martin (2008) Proteomic analysis of conditioned media from glucose responsive and glucose nonresponsive phenotypes reveals a panel of secreted proteins associated with beta cell dysfunction. Electrophoresis, 29 (20). pp. 4141-4149. ISSN 0173-0835

    Dowling, Paul and Walsh, Naomi and Clynes, Martin (2008) Membrane and membrane-associated proteins involved in the aggressive phenotype displayed by highly invasive cancer cells. Proteomics, 8 (19). pp. 4054-4065. ISSN 1615-9853

    Dowling, Paul and Wormald, Robert and Meleady, Paula and Henry, Michael and Curran, Aongus and Clynes, Martin (2008) Analysis of the saliva proteome from patients with head and neck squamous cell carcinoma reveals differences in abundance levels of proteins associated with tumour progression and metastasis. Journal of Proteomics, 71 (2). pp. 168-175. ISSN 1874-3919

    Downer, Eric J. and Clifford, Eileen and Amu, Sylvie and Fallon, Padraic G. and Moynagh, Paul N. (2012) The Synthetic Cannabinoid R(+)WIN55,212-2 Augments Interferon-β Expression via Peroxisome Proliferator-activated Receptor-α. Journal of Biological Chemistry, 287 (30). pp. 25440-25453. ISSN 0021-9258

    Downer, Eric J. and Clifford, Eileen and Gran, Bruno and Hendrik, J. Nel and Fallon, Padraig G. and Moynagh, Paul N. (2011) Identification of the Synthetic Cannabinoid R()WIN55,212-2 as a Novel Regulator of IFN Regulatory Factor 3 Activation and IFN- Expression. Journal of Biological Chemistry, 286 (12). pp. 10316-10328. ISSN 0021-9258

    Downes, Martin (2006) Irish Universities in the Knowledge Society: Society's Sentinels and the Citizen's vade mecum. In: What Price the University? Perspectives on the Meaning and Value of Higher Education from the National University of Ireland, Maynooth. National University of Ireland Maynooth, Maynooth, Ireland, pp. 81-95. ISBN 0901519766

    Downey, Liam and Lawlor, Bob and Quinn, Ciaran (2013) GSE1 Postgraduate Information Literacy and Communication Skills Training-Project Orientated Delivery. In: NUI Maynooth Teaching and Learning Showcase 2012/13, 8th May, 2013, NUI Maynooth. (Unpublished)

    Doyle, Sean (2011) Fungal proteomics: from identitcation to function. Microbiology Letters, 321. pp. 1-9.

    Doyle, Sean and Corcoran, Amanda (2006) The Immune Response to Parvovirus B19 Exposure in previously Seronegative and Seropositive Individuals. Journal of Infectious Diseases, 194 (2). pp. 154-158. ISSN 0022-1899

    Doyle, Sean and Mahon, Bernard P. and Corcoran, A. and Daly, P. (2002) High-Sensitivity PCR Detection of Parvovirus B19 Plasma. Journal of Clinical Microbiology, 40 (6). pp. 1958-1962.

    Doyle, Sarah L. and Shirey, Kari Ann and McGettrick, Anne F. and Kenny, Elaine F. and Carpenter, Susan B. and Caffrey, Brian E. and Gardan, Siobhan and Quinn, Susan R. and Cammano, Jorge H. and Moynagh, Paul N. and Vogel, Stefani N. and O'Neill, Luke A. (2013) NFκB2 p52 has a role in antiviral immunity through IKKε -dependent induction of Sp1 and IL-15. Journal of Biological Chemistry. ISSN 0021-9258

    Doyle, Sarah L. and Shirey, Kari Ann and McGettrick, Anne F. and Kenny, Elaine F. and Carpenter, Susan B. and Caffrey, Brian E. and Gargan, Siobhan and Quinn, Susan R. and Caamano, Jorge H. and Moynagh, Paul N. and Vogel, Stefanie N. and O'Neill, Luke A. (2013) Nuclear Factor κB2 p52 Protein Has a Role in Antiviral Immunity through IκB Kinase ϵ-dependent Induction of Sp1 Protein and Interleukin 15. Journal of Biological Chemistry, 288. 25066 -25075. ISSN 0021-9258

    Doyle, Sean (2011) The Detection of Parvoviruses. Methods in Molecular Biology, 665. pp. 213-231. ISSN 1064-3745

    Doyle, Sean (2011) Fungal proteomics: from identification to function. FEMS Microbiology Letters, 321 (1). pp. 1-9. ISSN 0378-1097

    Doyle, Sean (2001) Paravovirus B19 infection - an underestimated problem. In: The Irish Scientist. Samton Limited, p. 139. ISBN 1898706239

    Doyle, Sean and Corcoran, Amanda (2004) Advances in the biology, diagnosis and host-pathogen interactions of parvovirus B19. Journal of Medical Microbiology, 53. pp. 1-17.

    Doyle, Sean and Daly, Paul (2003) The development of a competitive PCR-ELISA for the detection of equine herpesvirus-1. Journal of Virological Methods, 107 (2). pp. 237-244. ISSN 0166-0934

    Doyle, Sean and Daly, Paul and Collier, T. (2002) PCR-ELISA detection of Escherichia coli in milk. Letters in Applied Microbiology, 34 (3). pp. 222-226. ISSN 0266-8254

    Doyle, Sean and Fox, M. and Gray, G. and Kavanagh, Kevin (2004) Detection of Aspergillus fumigatus mycotoxins: immunogen synthesis and immunoassay development. Journal of Microbiological Methods, 56 (2). pp. 221-230. ISSN 0167-7012

    Doyle, Sean and Kerr, S. and O'Keeffe, Grainne and O'Carroll, D. and Daly, P. and Kilty, C. (2000) Detection of parvovirus B19 IgM by antibody capture enzyme immunoassay: receiver operating characteristic analysis. Journal of Virological Methods, 90 (2). pp. 143-1522. ISSN 0166-0934

    Doyle, Sean and Schininà, M.E. and Bossa, F. and Doonan, S. (1990) The amino acid sequence of cytosolic aspartate aminotransferase from human liver. Biochemical Journal, 270 (3). pp. 651-657. ISSN 0264-6021

    Duffy, Ken R. and Subramanian, Vijay G. (2009) On the impact of correlation between collaterally consanguineous cells on lymphocyte population dynamics. Journal of Mathematical Biology, 59 (2). pp. 255-285. ISSN 1432-1416

    Duffy, Brion and Holliger, E. and Walsh, Fiona (2014) Streptomycin use in apple orchards did not increase abundance of mobile resistance genes. FEMS Microbiology Letters, 350. pp. 180-189. ISSN 0378-1097

    Duffy, C.P. and Elliott, C.J. and O'Connor, R.A. and Heenan, M.M. and Coyle, S. and Cleary, I.M. and Kavanagh, Kevin and Verhaegen, Steven and O'Loughlin, C.M. and NicAmhlaoibh, R. and Clynes, Martin (1998) Enhancement of chemotherapeutic drug toxicity to human tumour cells in vitro by a subset of non-steroidal anti-inflammatory drugs (NSAIDs). European Journal of Cancer, 34 (8). pp. 1250-1259. ISSN 0959-8049

    Duffy, Michelle M. and Pindjakova, Jana and Hanley, Shirley A. and McCarthy, Cathal and Weidhofer, Gudrun A. and Sweeney, Eva M. and English, Karen and Shaw, Georgina and Murphy, J. Mary and Barry, Frank P. and Mahon, Bernard P. and Belton, Orina and Ceredig, Rhodri and Griffin, Matthew D. (2011) Mesenchymal stem cell inhibition of T-helper 17 cell- differentiation is triggered by cell–cell contact and mediated by prostaglandin E2 via the EP4 receptor. European Journal of Immunology, 41 (10). pp. 2840-2851. ISSN 1521-4141

    Dunne, Aisling (2011) Can Plant Plastid Produce a Candidate Influenza Vaccine? PhD thesis, National University of Ireland Maynooth.

    de Assis, Leandro José and Ulas, Mevlut and Ries, Laure Nocolas Annick and El Ramli, Nadia Ali Mohamed and Bayram, Ozlem Sarikaya and Braus, Gerhard H. and Bayram, Ozgur and Goldman, Gustavo H. (2018) Regulation of Aspergillus nidulans CreA-Mediated Catabolite Repression by the F-Box Proteins Fbx23 and Fbx47. mBio, 9 (3). e00840-18. ISSN 2150-7511

    de Marchi, Rémi and Sorel, Maud and Mooney, Brian and Fudal, Isabelle and Goslin, Kevin and Kwasniewska, Kamila and Ryan, Patrick T. and Pfalz, Marina and Kroymann, Juergen and Pollmann, Stephan and Feechan, Angela and Wellmer, Frank and Rivas, Susana and Graciet, Emmanuelle (2016) The N-end rule pathway regulates pathogen responses in plants. Scientific Reports, 13 (6). p. 26020. ISSN 2045-2322

    de Vries, Ronald and Riley, Robert and Wiebenga, Ad and Aguilar-Osorio, Guillermo and Amillis, Sotiris and Akemi Uchima, Cristiane and Anderluh, Gregor and Asadollahi, Mojtaba and Askin, Marion and Barry, Kerrie and Battaglia, Evy and Bayram, Ozgur and Benocci, Tiziano and Braus-Stromeyer, Susanna A. and Caldana, Camila and Canovas, David and Cerqueira, Gustavo C. and Chen, Fusheng and Chen, Wanping and Choi, Cindy and Clum, Alicia and Correa dos Santos, Renato Augusto and de Lima Damasio, Andre Ricardo and Diallinas, George and Emri, Tamas and Fekete, Erzsebet and Flipphi, Michel and Freyberg, Susanne and Gallo, Antonia and Gournas, Christos and Habgood, Rob and Hainaut, Matthieu and Harispe, Maria Laura and Henrissat, Bernard and Hilden, Kristiina S. and Hope, Ryan and Hossain, Abeer and Karabika, Eugenia and Karaffa, Levente and Karanyi, Zsolt and Krasevec, Nada and Kuo, Alan and Kusch, Harald and LaButti, Kurt and Lagendijk, Ellen L. and Lapidus, Alla and Levasseur, Anthony and Lindquist, Erika and Lipzen, Anna and Logrieco, Antonio F. and MacCabe, Andrew and Makela, Miia R. and Malavazi, Iran and Melin, Petter and Meyer, Vera and Mielnichuk, Natalia and Miskei, Marton and Molnar, Akos P. and Mule, Giuseppina and Ngan, Chew Yee and Orejas, Margarita and Orosz, Erzsebet and Ouedraogo, Jean Paul and Overkamp, Karin M. and Park, Hee-Soo and Perrone, Giancarlo and Piumi, Francois and Punt, Peter J. and Ram, Arthur F.J. and Ramon, Ana and Rauscher, Stefan and Record, Eric and Riano-Pachon, Diego Mauricio and Robert, Vincent and Rohrig, Julian and Ruller, Roberto and Salamov, Asaf and Salih, Nadhira S. and Samson, Rob A. and Sandor, Erzsebet and Sanguinetti, Manuel and Schutze, Tabea and Sepcic, Kristina and Shelest, Ekaterina and Sherlock, Gavin and Sophianopoulou, Vicky and Squina, Fabio M. and Sun, Hui and Susca, Antonia and Todd, Richard B. and Tsang, Adrian and Unkles, Sheila E. and van de Wiele, Nathalie and van Rossen-Uffink, Diana and Velasco de Castro Oliveria, Juliana and Vesth, Tammi C. and Visser, Jaap and Yu, Jae-Hyuk and Zhou, Miamiao and Andersen, Mikael R. and Archer, David B. and Baker, Scott E. and Benoit, Isabelle and Brakhage, Axel A. and Braus, Gerhard H. and Fischer, Reinhard and Frisvad, Jens C. and Goldman, Gustavo H. and Houbraken, Jos and Oakley, Berl and Pocsi, Istvan and Scazzocchio, Claudio and Seiboth, Bernhard and vanKuyk, Patricia A. and Wortman, Jennifer and Dyer, Paul S. and Grigoriev, Igor V. (2017) Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus. Genome Biology, 18 (1). pp. 1-45. ISSN 1465-6906

    E

    Ebssa, Lemma and Dix, Ilona and Griffin, Christine (2008) Female presence is required for male sexual maturity in the nematode Steinernema longicaudum. Current Biology, 18 (21). R997-R998. ISSN 0960-9822

    Eckersall, P.D. and Duthie, S. and Safi, S. and Moffatt, D. and Horadagoda, N.U. and Doyle, Sean and Parton, R. and Bennett, D. and Fitzpatrick, J.L. (1999) An automated biochemical assay for haptoglobin: prevention of interference from albumin. Comparative Haematology International, 9 (3). pp. 117-124. ISSN 0938-7714

    Egan, Brendan and Dowling, Paul and O'Connor, Paul L. and Henry, Michael and Meleady, Paula and Zierath, Juleen R. and O'Gorman, Donal J. (2011) 2-D DIGE analysis of the mitochondrial proteome from human skeletal muscle reveals time coursedependent remodelling in response to 14 consecutive days of endurance exercise training. Proteomics, 11 (8). pp. 1413-1428. ISSN 1615-9853

    Eissing, Thomas and Waldherr, Steffen and Gondro, Cedric and Bullinger, Eric and Sawodny, Oliver and Allgöwer, Frank and Scheurich, Peter and Sauter, Thomas (2006) Sensitivity analysis of programmed cell death and implications for crosstalk phenomena during Tumor Necrosis Factor stimulation. In: Proceedings of the 2006 IEEE International Conference on Control Applications Munich, Germany, October 4-6, 2006. IEEE, pp. 1746-1752. ISBN 0-7803-9797-5

    Eivazian Kary, Naser and Niknam, Gholamreza and Griffin, Christine and Mohammadi, Seyed Abolgasem and Moghaddam, Mohammad (2009) A survey of entomopathogenic nematodes of the families Steinernematidae and Heterorhabditidae (Nematoda: Rhabditida) in the north-west of Iran. Nematology, 11 (1). pp. 107-116. ISSN 1388-5545

    Ellabib, M.S. and Agaj, M. and Khalifa, Z. and Kavanagh, Kevin (2001) Trichophyton violaceum is the dominant cause of tinea capitis in children in Tripoli, Libya: Results of a two year survey. Mycopathologia, 153. pp. 145-147. ISSN 0301-486X

    Ellabib, M.S. and Agaj, M. and Khalifa, Z. and Kavanagh, Kevin (2002) Yeasts of the genus Candida are the dominant cause of onychomycosis in Libyan women but not men: results of a 2-year surveillance study. British Journal of Dermatology, 146 (6). pp. 1038-1041. ISSN 0007-0963

    Ellabib, M.S. and Khalifa, Z. and Kavanagh, Kevin (2002) Dermatophytes and other fungi associated with skin mycoses in Tripoli, Libya. Mycoses, 45 (3-4). pp. 101-104. ISSN 0933-7407

    Ellabib, M.S. and Refaai, A. and Khalifa, Z. and Kavanagh, Kevin (2003) Isolation and identification of Madurella mycetomatis from two cases of black grain mycetoma in Libya. Mycoses, 46 (8). pp. 321-323. ISSN 0933-7407

    Elramli, Nadia and Karahoda, Betim and Bayram, Ozlem Sarikaya and Frawley, Dean and Ulas, Mevlut and Oakley, C. Elizabeth and Oakley, Berl R. and Seiler, Stephan and Bayram, Ozgur (2019) Assembly of a heptameric STRIPAK complex is required for coordination of light-dependent multicellular fungal development with secondary metabolism in Aspergillus nidulans. PLos Genetics, 15 (3). e1008053. ISSN 1553-7390

    English, Karen and Barry, Frank P. and Mahon, Bernard P. (2008) Murine mesenchymal stem cells suppress dendritic cell migration, maturation and antigen presentation. Immunology Letters, 115. pp. 50-58.

    English, Karen and Brady, Claire and Corcoran, Paul and Cassidy, Joseph P. and Mahon, Bernard P. (2006) Inflammation of the respiratory tract is associated with CCL28 and CCR10 expression in a murine model of allergic asthma. Immunology Letters, 103 (2). pp. 92-100. ISSN 0165-2478

    English, Karen (2013) Mechanisms of mesenchymal stromal cell immunomodulation. Immunology and Cell Biology, 91. pp. 19-26. ISSN 1440-1711

    English, Karen and Barry, Frank P. and Field-Corbett, Ciara and Mahon, Bernard P. (2007) IFN-y and TNF-x differentially regulate immunomodulation by murine mesenchymal stem cells. Immunology Letters, 110. pp. 91-100. ISSN 1879-0542

    English, Karen and Brady, Claire and Corcoran, Paul and Cassidy, Joseph P. and Mahon, Bernard P. (2006) Inflammation of the respiratory tract is associated with CCL28 andCCR10 expression in a murine model of allergic asthma. Immunology Letters, 103. pp. 92-100. ISSN 0165-2478

    English, Karen and French, Anna and Wood, Kathryn J. (2010) Mesenchymal Stromal Cells: Facilitators of Successful Transplantation? Cell Stem Cell, 7. pp. 431-442. ISSN 1875-9777

    English, Karen and Mahon, Bernard P. (2011) Allogeneic Mesenchymal Stem Cells: Agents of Immune Modulation. Journal of Cellular Biochemistry, 112. pp. 1963-1968. ISSN 1097-4644

    English, Karen and Mahon, Bernard P. and Wood, Kathryn J. (2014) Mesenchymal Stromal Cells; Role in Tissue Repair, Drug Discovery and Immune Modulation. Current Drug Delivery, 11 (5). pp. 561-571. ISSN 1567-2018

    English, Karen and Ryan, J.M. and Tobin, L. and Murphy, M.J. and Barry, F.P. and Mahon, Bernard P. (2009) Cell contact, prostaglandin E2 and transforming growth factor beta 1 play non-redundant roles in human mesenchymal stem cell induction of CD4+CD25High forkhead box P3+ regulatory T cells. Clinical and Experimental Immunology, 156. pp. 149-160.

    English, Karen and Tonlorenzi, Rossana and Cossu, Giulio and Wood, Kathryn J (2013) Mesoangioblasts Suppress T Cell Proliferation Through IDO and PGE-2-Dependent Pathways. Stem Cells and Development, 22 (3). pp. 512-523. ISSN 1547-3287

    English, Karen and Wood, Kathryn J. (2013) Mesenchymal Stromal Cells in Transplantation Rejection and Tolerance. Cold Spring Harbor perspectives in medicine, 3. ISSN 2157-1422

    Ennis, D.P. and Cassidy, J.P. and Mahon, Bernard P. (2004) Prior Bordetella pertussis infection modulates allergen priming and the severity of airway pathology in a murine model of allergic asthma. Clinical and Experimental Allergy, 34. pp. 1488-1497.

    Ennis, Darragh (2009) Behavioural interactions between the large pine weevil, Hylobius abietis L.(Coleoptera: Curculionidae), and entomopathogenic nematodes. PhD thesis, National University of Ireland Maynooth.

    Ennis, Darragh E. and Dillon, Aoife B. and Griffin, Christine (2010) Pine weevils modulate defensive behaviour in response to parasites of differing virulence. Animal Behaviour, 80. pp. 283-288. ISSN 0003-3472

    Ennis, Darren P. and Cassidy, Joseph P. and Mahon, Bernard P. (2005) Acellular Pertussis Vaccine Protects against Exacerbation of Allergic Asthma Due to Bordetella pertussis in a Murine Model. Clinical and Diagnostic Laboratory Immunology, 12. pp. 409-417.

    Ennis, D.P. and Dillon, A.B. and Griffin, Christine (2010) Simulated roots and host feeding enhance infection of subterranean insects by the entomopathogenic nematode Steinernema carpocapsae. Journal of Invertebrate Pathology, 103 (2). pp. 140-143. ISSN 0022-2011

    Ennis, Darren P. and Cassidy, Joseph P. and Mahon, Bernard P. (2005) Whole-cell pertussis vaccine protects against Bordetella pertussis exacerbation of allergic asthma. Immunology Letters, 97. pp. 91-100.

    Ennisa, Darren P. and Cassidy, Joseph P. and Mahon, Bernard P. (2004) Whole-cell pertussis vaccine protects against Bordetella pertussis exacerbation of allergic asthma. Immunology Letters, 97 (1). pp. 91-100.

    Enright, M.R. and Griffin, Christine (2004) Specificity of Association between Paenibacillus spp. and the Entomopathogenic Nematodes, Heterorhabditis spp. Microbial Ecology, 48. pp. 412-421.

    Enright, Michael R. and Griffin, Christine (2005) Effects of Paenibacillus nematophilus on the entomopathogenic nematode Heterorhabditis megidis. Journal of Invertebrate Pathology, 88. pp. 40-48.

    Enright, Michael R. and Finnegan, Michelle and McInerney, James O. and O'Laighleis, Matthew and Griffin, Christine (2001) Specific Adherence of Sporangia of a Paenibacillus Sp. Bacterium to Heterorhabditis Spp. Nematodes. Hitching a Ride to Lunch? In: Developments in entomopathogenic nematode/bacterial research: Proceedings of the workshop held at the National University of Ireland Maynooth 13 to 15 April 2000. Office for Official Publications of the European Communities, pp. 301-306. ISBN 9289404671

    Enright, Michael R. and McInerney, James O. and Griffin, Christine (2003) Characterization of endospore-forming bacteria associated with entomopathogenic nematodes, Heterorhabditis spp., and description of Paenibacillus nematophilus sp. nov. International Journal of Systematic and Evolutionary Microbiology, 53. pp. 435-441. ISSN 1466-5026

    Eshwika, Ahmed and Coyle, Barry and Devereux, Michael and McCann, Malachy and Kavanagh, Kevin (2004) Metal complexes of 1,10-phenanthroline-5,6-dione alter the susceptibility of the yeast Candida albicans to Amphotericin B and Miconazole. Biometals, 17. pp. 415-422.

    Eshwika, Ahmed and Kelly, Judy and Fallon, John P. and Kavanagh, Kevin (2013) Exposure of Aspergillus fumigatus to caspofungin results in the release, and de novo biosynthesis, of gliotoxin. Medical Mycology, 51. pp. 121-127. ISSN 1232-986X

    Eshwika, Ahmed (2014) An Analysis of the Response of Aspergillus fumigatus and Candida albicans to Caspofungin. PhD thesis, National University of Ireland Maynooth.

    Eustace, Alex J. and Dowling, Paul and Henry, Michael and Doolan, Padraig and Meleady, Paula and Clynes, Martin and Crown, John and O'Donovan, Norma (2011) 2D-DIGE analysis of phospho-enriched fractions from dasatinib-treated melanoma cell lines. Journal of Proteomics, 74 (4). pp. 490-501. ISSN 1874-3919

    Everard, A. and Griffin, Christine and Dillon, A.B. (2009) Competition and intraguild predation between the braconid parasitoid Bracon hylobii and the entomopathogenic nematode Heterorhabditis downesi, natural enemies of the large pine weevil, Hylobius abietis. Bulletin of Entomological Research, 99. pp. 151-161. ISSN 0007-4853

    F

    Fagan, Sheena and Owens, Rebecca A. and Ward, Patrick and Connolly, Cathal and Doyle, Sean and Murphy, Richard (2015) Biochemical Comparison of Commercial Selenium Yeast Preparations. Biological Trace Element Research, 166. pp. 245-259. ISSN 0163-4984

    Fajardo-Somera, Rosa A. and Johnk, Bastian and Bayram, Ozgur and Valerius, Oliver and Braus, Gerhard H. (2015) Dissecting the function of the different chitin synthases in vegetative growth and sexual development in Neurospora crassa. Fungal Genetics and Biology, 75. pp. 30-45. ISSN 1087-1845

    Fallon, John (2010) An analysis of the interaction of environmental and clinical isolates of Aspergillus fumigatus with vertebrate and invertebrate immune responses. PhD thesis, National University of Ireland Maynooth.

    Fallon, John P. and Reeves, Emer P. and Kavanagh, Kevin (2010) Inhibition of neutrophil function following exposure to the Aspergillus fumigatus toxin fumagillin. Journal of Medical Microbiology, 59 (6). pp. 625-633. ISSN 0022-2615

    Fallon, John P. and Reeves, Emer P. and Kavanagh, Kevin (2011) The Aspergillus fumigatus toxin fumagillin suppresses the immune response of Galleria mellonella larvae by inhibiting the action of haemocytes. Microbiology, 157 (5). pp. 1481-1488. ISSN 1465-2080

    Fallon, John P. and Troy, Niamh and Kavanagh, Kevin (2011) Pre-exposure of Galleria mellonella larvae to different doses of Aspergillus fumigatus conidia causes differential activation of cellular and humoral immune responses. Virulence, 2 (5). pp. 413-425. ISSN 2150-5594

    Fallon, John and Kelly, Judy and Kavanagh, Kevin (2012) Galleria mellonella as a Model for Fungal Pathogenicity Testing. In: Host-Fungus Interactions. Methods in Molecular Biology book series (MIMB) (845). Humana Press, pp. 469-485. ISBN 9781617795381

    Fares, Mario Ali and Moya, Andres and Barrio, Eladio (2004) GroEL and the maintenance of bacterial endosymbiosis. Trends in Genetics, 20 (9). pp. 413-416.

    Fares, Mario A. (2004) SWAPSC: sliding window analysis procedure to detect selective constraints. Bioinformatics, 20 (16). pp. 2867-2868.

    Fares, Mario A. and Keane, Orla M. and Toft, Christina and Carretero-Paulet, Lorenzo and Jones, Gary W. (2013) The Roles of Whole-Genome and Small-Scale Duplications in the Functional Specialization of Saccharomyces cerevisiae Genes. PLos Genetics, 9 (1). e1003176. ISSN 1553-7390

    Farina, Marcello and Findeisen, Rolf and Bullinger, Eric and Bittanti, Sergio and Allgöwer, Frank and Wellstead, Peter (2006) Results Towards Identifiability Properties of Biochemical Reaction Networks. In: 45th IEEE Conference on Decision & Control Manchester Grand Hyatt Hotel San Diego, CA, USA, December 13-15, 2006. IEEE, pp. 2104-2109. ISBN 1-4244-0171-2

    Ferreira, Jorge and Middleton, Rick (2008) An in-silico analysis of the SMART study of HIV infection. IFAC Symposia Series.

    Ferreira, Jorge and Middleton, Rick (2008) An in-silico analysis of the SMART study of HIV infection. In: 7th IFAC Symposium on Modelling and Control, November 2008.

    Feuda, Roberto (2012) Comparative genomics of early animal evolution. PhD thesis, National University of Ireland Maynooth.

    Feuda, Roberto and Hamilton, Sinead C. and McInerney, James O. and Pisani, Davide (2012) Metazoan opsin evolution reveals a simple route to animal vision. Proceedings of the National Academy of Sciences . ISSN 1091-6490

    Finnegan, Michelle and Downes, Martin and O'Regan, Myra and Griffin, Christine (1999) Effect of salt and temperature stresses on survival and infectivity of Heterorhabditis spp. IJs. Nematology, 1 (1). pp. 69-78. ISSN 1388-5545

    Fisher, John F. and Kavanagh, Kevin and Sobel, Jack D. and Kauffman, Carol A. and Newman, Cheryl A. (2011) Candida Urinary Tract Infection: Pathogenesis. Clinical Infectious Diseases, 52 (S6). S437-S451. ISSN 1058-4838

    Fitters, Paul F.L. and Griffin, Christine (2004) Spontaneous and induced activity of Heterorhabditis megidis infective juveniles during storage. Nematology, 6. pp. 911-917.

    Fitters, Paul F.L. and Griffin, Christine (2006) Survival, starvation, and activity in Heterorhabditis megidis (Nematoda: Heterorhabditidae). Biological Control, 37. pp. 82-88.

    Fitters, Paul F.L. and Dunne, R. and Griffin, Christine (2001) Vine Weevil Control in Ireland with Entomopathogenic Nematodes: Optimal Time of Application. Irish Journal of Agricultural and Food Research, 40 (2). pp. 199-213. ISSN 07916833

    Fitters, Paul F.L. and Dunne, Richard and Griffin, Christine (2001) Improved Control of Otiorhynchus sulcatus at 9°C by Cold-stored Heterorhabditis megidis UK211. Biocontrol Science and Technology, 11 (4). pp. 483-492. ISSN 1360-0478

    Fitters, Paul F.L. and Patel, Mavji N. and Griffin, Christine and Wright, Denis J. (1999) Fatty acid composition of Heterorhabditis sp. during storage. Comparative Biochemistry and Physiology Part B, 124 (1). pp. 81-88. ISSN 0010-406X

    Fitzpatrick, David A. (2011) Horizontal gene transfer in fungi. Microbiology Letters.

    Fitzpatrick, David A. and Creevey, Christopher J. and McInerney, James O. (2006) Genome Phylogenies Indicate a Meaningful a-Proteobacterial Phylogeny and Support a Grouping of the Mitochondria with the Rickettsiales. Molecular Biology and Evolution, 23 (1). pp. 74-85.

    Fitzpatrick, David A. and Logue, Mary E. and Butler, Geraldine (2008) Evidence of recent interkingdom horizontal gene transfer between bacteria and Candida parapsilosis. BMC Evolutionary Biology, 8. pp. 181-195. ISSN 1471-2148

    Fitzpatrick, David A. and Logue, Mary E. and Stajich, Jason E. and Butler, Geraldine (2006) A fungal phylogeny based on 42 complete genomes derived from supertree and combined gene analysis. BMC Evolutionary Biology, 6. pp. 99-113. ISSN 1471-2148

    Fitzpatrick, David A. and McInerney, James O. (2005) Evidence of Positive Darwinian Selection in Omp85, a Highly Conserved Bacterial Outer Membrane Protein Essential for Cell Viability. Journal of Molecular Evolution, 61 (1). pp. 90-98.

    Fitzpatrick, David A. and O'Gaora, Peadar and Byrne, Kevin P. and Butler, Geraldine (2010) Analysis of gene evolution and metabolic pathways using the Candida Gene Order Browser. BMC Genomics, 11 (290). pp. 1-14. ISSN 1471-2164

    Fitzpatrick, David A. and O'Halloran, Damien M. (2012) Investigating the Relationship between Topology and Evolution in a Dynamic Nematode Odor Genetic Network. International Journal of Evolutionary Biology, 2012 (548081). ISSN 2090-052X

    Fitzpatrick, David A. and O'Halloran, Damien M. and Burnell, Ann (2006) Multiple lineage specific expansions within the guanylyl cyclase gene family. BMC Evolutionary Biology, 6. pp. 26-43. ISSN 1471-2148

    Fitzpatrick, David A. (2009) Lines of Evidence for Horizontal Gene Transfer of a Phenazine Producing Operon into Multiple Bacterial Species. Journal of Molecular Evolution, 68 (2). pp. 171-185. ISSN 0022-2844

    Fitzpatrick, David A. and Creevey, Christopher J. and McInerney, James O. (2005) Evidence of Positive Darwinian Selection in Putative Meningococcal Vaccine Antigens. Journal of Molecular Evolution, 61 (1). pp. 90-98. ISSN 0022-2844

    Fitzpatrick, David A. and O'Brien, Jennifer and Moran, Ciara and Hasin, Naushaba and Kenny, Elaine and Cormican, Paul and Gates, Amy and Morris, Derek W. and Jones, Gary W. (2011) Assessment of Inactivating Stop Codon Mutations in Forty Saccharomyces cerevisiae Strains: Implications for [PSI+] Prion-Mediated Phenotypes. PLoS ONE, 6 (12). e28684. ISSN 1932-6203

    Fitzpatrick, David A. and Walsh, Fiona (2016) Antibiotic resistance genes across a wide variety of metagenomes. FEMS Microbiology Ecology, 92 (2). fiv168. ISSN 1574-6941

    Flannery, Marie-Louise and Meade, Conor and Mullins, Ewen (2005) Employing a composite gene-flow index to numerically quantify a crop’s potential for gene flow: an Irish perspective. Environmental Biosafety Research, 4 (1). pp. 29-43. ISSN 1635-7922

    Flendring, Leonard M. and Chamuleau, Robert A.F.M. and Maas, Martinus A.W. and Daalhuisen, Joost and Hasset, Brian and Kilty, Cormac G. and Doyle, Sean and Ladiges, Nita C.J.J. and Jörning, George G.A. and la Soe, John W. and Sommeijer, Dirkje and te Velde, Anje A. (1999) Evaluation of a novel bioartificial liver in rats with complete liver ischemia: treatment efficacy and species-specific alpha-GST detection to monitor hepatocyte viability. Journal of Hepatology, 30 (2). pp. 311-321. ISSN 0168-8278

    Flynn, Marion A. and Casey, David G. and Todryk, Stephen M. and Mahon, Bernard P. (2004) Efficient delivery of small interfering RNA for inhibition of IL-12p40 expression in vivo. Journal of Inflammation, 1 (4). pp. 1-12.

    Flynn, Ciara (2014) Nocturnal Lepidoptera of Midland Raised Bogs. Masters thesis, National University of Ireland Maynooth.

    Fouhy, Fiona and Stanton, Catherine and Cotter, Paul D. and Hill, Colin and Walsh, Fiona (2015) Proteomics as the final step in the functional metagenomics study of antimicrobial resistance. Frontiers in Microbiology, 6 (172). pp. 1-6. ISSN 1664-302X

    Franquesa, Marcella and Hoogduijn, Martin J. and Reinders, Marlies E. and Eggenhofer, Elke and Engela, Anja U. and Mensah, Fane K. and Torras, Joan and Pileggi, Antonello and van Kooten, Cees and Mahon, Bernard P. and Detry, Oliver and Popp, Felix C. and Benseler, Volker and Casiraghi, Federica and Johnson, Christian and Ancans, Janis and Fillenberg, Barbara and delaRosa, Olga and Aran, Josep M. and Roemeling-van Rhijn, Marieke and Pinxteren, Jef and Perico, Norberto and Gotti, Eliana and Christ, Bruno and Reading, James and Introna, Martino and Deans, Robert and Shagidulin, Murat and Farré, Ramon and Rambaldi, Alessandro and Sanchez-Fueyo, Albert and Obermajer, Natasha and Pulin, Audrey and Dor, Frank J.M.F. and Portero-Sanchez, Isabel and Baan, Carla C. and Rabelink, Ton J. and Remuzzi, Giuseppe and Betjes, Michiel G.H. and Dahlke, Marc H. and Grinyó, Josep M. (2013) Mesenchymal Stem Cells in Solid Organ Transplantation (MiSOT) 4th meeting: Lessons learned from first clinical trials. Transplantation, 96 (3). pp. 234-238. ISSN 0041-1337

    Frawley, Dean and Karahoda, Betim and Bayram, Ozlem Sarikaya and Bayram, Ozgur (2018) The HamE scaffold positively regulates MpkB phosphorylation to promote development and secondary metabolism in Aspergillus nidulans. Scientific Reports, 8 (16588). ISSN 2045-2322

    Fullam, Anthony (2013) The role of the DEAD box Helicase DDX3X in Anti-­‐Viral Signalling Pathways Mediated by the Kinase IKKα. PhD thesis, National University of Ireland Maynooth.

    Fullam, Anthony and Schroeder, Martina (2013) DExD/H-box RNA helicases as mediators of anti-viral innate immunity and essential host factors for viral replication. Biochimica et Biophysica Acta - Proteins and Proteomics, 1829. pp. 854-865. ISSN 1570-9639

    G

    Gaffney, Mark and Carberry, Stephen and Doyle, Sean and Murphy, Richard (2009) Purification and characterisation of a xylanase from Thermomyces lanuginosus and its functional expression by Pichia pastoris. Enzyme and Microbial Technology, 45 (5). pp. 348-354. ISSN 0141-0229

    Gaffney, Mark and Doyle, Sean and Murphy, Richard (2009) Optimization of Xylanase Production by Thermomyces Ianuginosus in Solid State Fermentation. Bioscience, Biotechnology, and Biochemistry, 74 (12). pp. 2640-2644. ISSN 0916-8451

    Gallagher, Lorna (2010) Functional Genomic Analysis of Natural Product Biosynthesis and Secretion in Aspergillus fumigatus. PhD thesis, National University of Ireland Maynooth.

    Gallagher, Lorna and Owens, Rebecca A. and Dolan, Stephen K. and O'Keefe, Grainne and Schrettl, Markus and Kavanagh, Kevin and Jones, Gary W. and Doyle, Sean (2012) The Aspergillus fumigatus Protein GliK Protects against Oxidative Stress and Is Essential for Gliotoxin Biosynthesis. Eukaryotic Cell, 11 (10). pp. 1226-1238. ISSN 1535-9778

    Gannon, Jay and Ohlendieck, Kay (2012) Subproteomic analysis of basic proteins in aged skeletal muscle following offgel pre-fractionation. Molecular Medicine Reports, 5 (4). pp. 993-1000. ISSN 1791-2997

    Gannon, Joan and Doran, Philip and Kirwan, Anne and Ohlendieck, Kay (2009) Drastic increase of myosin light chain MLC-2 in senescent skeletal muscle indicates fast-to-slow fibre transition in sarcopenia of old age. European Journal of Cell Biology, 88 (11). pp. 685-700. ISSN 0171-9335

    Gannon, Joan and Staunton, Lisa and O'Connell, Kathleen and Doran, Philip and Ohlendieck, Kay (2008) Phosphoproteomic analysis of aged skeletal muscle. International Journal of Molecular Medicine, 22 (1). pp. 33-42. ISSN 1107-3756

    Gargan, Siobhan (2011) Probing the Mechanisms Underlying the Regulatory Effects of Cactin in Innate Immune Signalling Pathways. PhD thesis, National University of Ireland Maynooth.

    Garland, M.R. and Lavelle, E and Doherty, D and Golden-Mason, L. and Fitzpatrick, P and Hill, A and Walsh, N and O'Farrelly, C (2004) Cortisol does not mediate the suppressive effects of psychiatric morbidity on natural killer cell activity: a cross-sectional study of patients with early breast cancer. Psychological Medicine, 34 (3). pp. 481-490.

    Gekenidis, Maria-Theresia and Schöner, Ulrich and von Ah, Ueli and Schmelcher, Mathias and Walsh, Fiona and Drissner, D. (2018) Tracing back multidrug-resistant bacteria in fresh herb production: from chive to source through the irrigation water chain. FEMS Microbiology Ecology, 94 (11). fiy149. ISSN 1574-6941

    Geraghty, Patrick and Kavanagh, Kevin (2003) Erythromycin, an inhibitor of mitoribosomal protein biosynthesis, alters the amphotericin B susceptibility of Candida albicans. Journal of Pharmacy and Pharmacology, 55 (2). pp. 179-184.

    Geraghty, Patrick and Kavanagh, Kevin (2003) Disruption of mitochondrial function in Candida albicans leads to reduced cellular ergosterol levels and elevated growth in the presence of amphotericin B. Archives of Microbiology, 179 (4). pp. 295-300. ISSN 0302-8933

    Gerke, Jennifer and Bayram, Ozgur and Braus, Gerhard H. (2012) Fungal S-adenosylmethionine synthetase and the control of development and secondary metabolism in Aspergillus nidulans. Fungal Genetics and Biology, 49. pp. 443-454. ISSN 1087-1845

    Gerke, Jennifer and Bayram, Ozgur and Feussner, Kirstin and Landesfeind, Manuel and Shelest, Ekaterina and Feussner, Ivo and Braus, Gerhard H. (2012) Breaking the Silence: Protein Stabilization Uncovers Silenced Biosynthetic Gene Clusters in the Fungus Aspergillus nidulans. Applied and Environmental Microbiology, 78 (23). pp. 8234-8244. ISSN 0099-2240

    Gibbs, Richard A. and Kovar, Christie and Fowler, Gerald R. and Nazareth, Lynne V. and Atsushi, Nakabachi and Worley, Kim C. and Tagu, Denis and Richards, Stephen and Gabaldon, Toni and Rispe, Claude and Quesneville, Hadi and Douglas, Angela and Shigenobu, Shuji and Moran, Nancy and Barribeau, Seth M. and Gerardo, Nichole M. and Ghanim, Murad and Chang, Chun-che and Davis, Gregory K. and Rider Jr., Stanley Dean and Walsh, Thomas K. and Brisson, Jennifer A. and Miura, Toru and Srinivasan, Dayalan and Willson, Alex C.C. and Jaubert-Possamai, Stephanie and Robertson, Hugh M. and Field, Linda M. and Jander, Georg and Carolan, James C. and Edwards, Owain R. and Tamborindeguy, Cecilia and Martinez-Torres, David and Dale, Richard P. and Charles, Hubert (2010) Genome Sequence of the Pea Aphid Acyrthosiphon pisum. PLoS Biology, 8 (2). e1000313. ISSN 1545-7885

    Gilbert, Jennifer L. (2009) The Role of Bone Morphogenetic Protein (BMP) Signalling in Lung Cancer and Lung Regeneration. PhD thesis, National University of Ireland Maynooth.

    Gildea, Sarah and Fitzpatrick, David A. and Cullinane, Ann (2013) Epidemiological and virological investigations of equine influenza outbreaks in Ireland (2010–2012). Influenza and Other Respiratory Viruses, 7 (S.4). pp. 61-74. ISSN 1750-2659

    Girling, R.D. and Ennis, D. and Dillon, A.B. and Griffin, Christine (2010) The lethal and sub-lethal consequences of entomopathogenic nematode infestation and exposure for adult pine weevils, Hylobius abietis (Coleoptera: Curculionidae). Journal of Invertebrate Pathology, 104 (3). pp. 195-202. ISSN 0022-2011

    Glover, Louise and Heffron, James J.A. and Ohlendieck, Kay (2004) Increased sensitivity of the ryanodine receptor to halothane-induced oligomerization in malignant hyperthermia-susceptible human skeletal muscle. Journal of applied physiology, 96 (1). pp. 11-18. ISSN 8750-7587

    Glover, Louise and Ohlendieck, Kay (2004) Illustration of Skeletal Muscle Calsequestrin Complex Formation by Cell Overlay and Two-Dimensional Blot Overlay Methodology. Basic and Applied Myology, 14 (4). pp. 231-241. ISSN 1120-9992

    Glover, Louise and Quinn, Sandra and Ryan, Michelle and Pette, Dirk and Ohlendieck, Kay (2002) Supramolecular calsequestrin complex : Protein–protein interactions in chronic low-frequency stimulated muscle, postnatal development and ageing. European Journal of Biochemistry, 269 (18). pp. 4607-4616. ISSN 0014-2956

    Gonzalez-Rabade, Nuria and McGowan, Edward G. and Zhou, Fei and McCabe, Matthew and Bock, Ralph and Dix, Philip and Gray, John C. and Ma, Julian K-C. (2011) Immunogenicity of chloroplast-derived HIV-1 p24 and a p24-Nef fusion protein following subcutaneous and oral administration in mice. Plant Biotechnology Journal, 9 (6). pp. 629-638. ISSN 1467-7644

    Goslin, Kevin (2019) Characterization of the Ubiquitin N-end Rule Pathway in Arabidopsis. PhD thesis, National University of Ireland Maynooth.

    Goslin, Kevin and Zheng, Beibei and Serrano-Mislata, Antonio and Rae, Liina and Ryan, Patrick T. and Kwasniewska, Kamila and Thomson, Bennett and Ó'Maoiléidigh, Diarmuid S. and Madueno, Francisco and Wellmer, Frank and Graciet, Emmanuelle (2017) Transcription Factor Interplay between LEAFY and APETALA1/CAULIFLOWER during Floral Initiation. Plant Physiology, 174 (2). pp. 1097-1109. ISSN 1532-2548

    Goyal, K. and Browne, J.A. and Burnell, Ann and Tunnacliffe, A. (2005) Dehydration-induced tps gene transcripts from an anhydrobiotic nematode contain novel spliced leaders and encode atypical GT-20 family proteins. Biochimie, 87. pp. 565-574.

    Goyal, Kshamata and Tisi, Laurence and Basran, Amrik and Browne, John and Burnell, Ann and Zurdo, Jesus and Tunnacliffe, Alan (2003) Transition from Natively Unfolded to Folded State Induced by Desiccation in an Anhydrobiotic Nematode Protein. The Journal of Biological Chemistry, 278 (15). pp. 12977-12984.

    Graciet, Emmanuelle and Gans, Pierre and Wedel, Norbert and Lebreton, Sandrine and Camadro, Jean-Michel and Gontero, Brigitte (2003) The Small Protein CP12: A Protein Linker for Supramolecular Complex Assembly. Biochemistry, 42 (27). pp. 8163-8170. ISSN 0006-2960

    Graciet, Emmanuelle and Hu, Rong-Gui and Piatkov, Konstantin and Rhee, Joon Haeng and Schwarz, Erich M. and Varshavsky, Alexander (2006) Aminoacyl-transferases and the N-end rule pathway of prokaryotic/eukaryotic specificity in a human pathogen. Proceedings of the National Academy of Sciences, 103 (9). pp. 3078-3083. ISSN 1091-6490

    Graciet, Emmanuelle and Lebreton, Sandrine and Camadro, Jean-Michel and Gontero, Brigitte (2003) Characterization of native and recombinant A4 glyceraldehyde 3-phosphate dehydrogenase. Kinetic evidence for conformation changes upon association with the small protein CP12. European Journal of Biochemistry, 270 (1). pp. 129-136. ISSN 0014-2956

    Graciet, Emmanuelle and Lebreton, Sandrine and Camadro, Jean-Michel and Gontero, Brigitte (2002) Thermodynamic Analysis of the Emergence of New Regulatory Properties in a Phosphoribulokinase-Glyceraldehyde 3-Phosphate Dehydrogenase Complex. Journal of Biological Chemistry, 277 (15). pp. 12697-12702. ISSN 0021-9258

    Graciet, Emmanuelle and Lebreton, Sandrine and Gontero, Brigitte (2004) Emergence of new regulatory mechanisms in the Benson-Calvin pathway via protein-protein interactions: a glyceraldehyde-3-phosphate dehydrogenase/CP12/phosphoribulokinase complex. Journal of Experimental Botany, 55 (400). pp. 1245-1254. ISSN 0022-0957

    Graciet, Emmanuelle and Mesiti, Francesca and Wellmer, Frank (2010) Structure and evolutionary conservation of the plant N-end rule pathway. The Plant Journal, 61. pp. 741-751. ISSN 0960-7412

    Graciet, Emmanuelle and Mulliert, Guillermo and Lebreton, Sandrine and Gontero, Brigitte (2004) Involvement of two positively charged residues of Chlamydomonas reinhardtii glyceraldehyde-3-phosphate dehydrogenase in the assembly process of a bi-enzyme complex involved in CO2 assimilation. European Journal of Biochemistry, 271 (23-24). pp. 4737-4744. ISSN 0014-2956

    Graciet, Emmanuelle and Walter, Franziska and Ó’Maoiléidigh, Diarmuid S. and Pollmann, Stephan and Meyerowitz, Elliot M. and Varshavsky, Alexander and Wellmer, Frank (2009) The N-end rule pathway controls multiple functions during Arabidopsis shoot and leaf development. Proceedings of the National Academy of Sciences, 106 (32). pp. 13618-13623. ISSN 1091-6490

    Graciet, Emmanuelle and Wellmer, Frank (2010) The plant N-end rule pathway: structure and functions. Trends in Plant Science, 15 (8). pp. 447-453. ISSN 1878-4372

    Graciet, Emmanuelle and Ó'Maoiléidigh, Diarmuid S. and Wellmer, Frank (2014) Next-Generation Sequencing Applied to Flower Development (ChIP-Seq). In: Flower Development. Methods in Molecular Biology (Methods and Protocols) (1110). Humana Press, pp. 413-429. ISBN 9781461494089

    Grant, Olga M. and Brennan, Donal P. and Mellisho Salas, Carmen D. and Dix, Philip (2014) Impact of Enhanced Capacity to Scavenge Reactive Oxygen Species on Cold Tolerance of Tobacco. International Journal of Plant Sciences, 175 (5). pp. 544-554. ISSN 1058-5893

    Griffin, Bryan D. and Mellett, Mark and Campos-Torres, Antonio and Kinsella, Gemma K. and Wang, Bingwei and Moynagh, Paul N. (2011) A poxviral homolog of the Pellino protein inhibits Toll and Toll-like receptor signalling. European Journal of Immunology, 41 (3). pp. 798-812.

    Griffin, Christine and Boemare, N.E. and Lewis, E.E. (2005) Biology and Behaviour. In: Nematodes as biocontrol agents. CAB International, pp. 47-64. ISBN 0851990177

    Griffin, Christine (2012) Perspectives on the Behavior of Entomopathogenic Nematodes from Dispersal to Reproduction: Traits Contributing to Nematode Fitness and Biocontrol Efficacy. Journal of Nematology, 44 (2). pp. 177-184. ISSN 0022-300X

    Griffin, Christine and Dix, Ilona and Joyce, Susan A. and Burnell, Ann and Downes, Martin (1999) Isolation and characterisation of Heterorhabditis spp. (Nematoda: Heterorhabditidae) from Hungary, Estonia and Denmark. Nematology, 1 (3). pp. 321-332.

    Griffin, Christine and Joyce, Susan A. and Dix, Ilona and Burnell, Ann and Downes, Martin (1994) Characterisation of the entomopathogenic nematode Heterorhabditk (Nematoda : Heterorhabditidae) from Ireland and Britain by molecular and cross-breeding techniques,and the occurrence of the genus in these islands. Fundalmental Applied Nematology, 17 (3). pp. 245-253.

    Griffin, Matthew D. and Ritter, Thomas and Mahon, Bernard P. (2010) Immunological Aspects of Allogeneic Mesenchymal Stem Cell Therapies. Human Gene Theraphy, 21 (12). pp. 1641-1655.

    Griffin, Bryan D. and Moynagh, Paul N. (2006) In vivo binding of NF-κB to the IκBβ promoter is insufficient for transcriptional activation. Biochemical Journal, 400. pp. 115-125. ISSN 0264-6021

    Griffin, Bryan D. and Moynagh, Paul N. (2006) Persistent Interleukin-1β Signaling Causes Long Term Activation of NFκB in a Promoter-specific Manner in Human Glial Cells. Journal of Biological Chemistry, 281 (15). pp. 10316-10326. ISSN 0021-9258

    Griffin, Christine and Chaerani, R. and Fallon, D. and Reid, A.P. and Downes, Martin (2000) Occurrence and distribution of the entomopathogenic nematodes Steinernema spp. and Heterorhabditis indica in Indonesia. Journal of Helminthology, 74 (2). pp. 143-150. ISSN 0022-149X

    Griffin, Christine and O'Callaghan, K.M. and Dix, I. (2001) A self-fertile species of Steinernema from Indonesia: further evidence of convergent evolution amongst entomopathogenic nematodes? Parasitology, 122. pp. 181-186. ISSN 0031-1820

    Griffin, Christine (2015) Behaviour and Population Dynamics of Entomopathogenic Nematodes Following Application. In: Nematode Pathogenesis of Insects and Other Pests. Springer, pp. 57-95. ISBN 9783319182650

    Griffin, Matthew D. and Elliman, Stephen J and Cahill, Emer and English, Karen (2013) Concise Review: Adult Mesenchymal Stromal Cell Therapy for Inflammatory Diseases: How Well Are We Joining the Dots? Stem Cells, 31. pp. 2033-2041. ISSN 1549-4918

    Griffin, Steven (2015) Production and characterisation of yeast cell wall preparations with binding activity against Salmonella and Escherichia coli. PhD thesis, National University of Ireland Maynooth.

    Griffith, Darren M. and Duff, Brian and Suponitsky, Kyrill Y. and Kavanagh, Kevin and Morgan, Maria P. and Egan, Denise and Marmion, Celine J. (2011) Novel trans-platinum complexes of the histone deacetylase inhibitor valproic acid; synthesis, in vitro cytotoxicity and mutagenicity. Journal of Inorganic Biochemistry, 105 (6). pp. 793-799. ISSN 0162-0134

    Gu, Lili and Fullam, Anthony and Brennan, Ruth and Schroeder, Martina (2013) Human DEAD Box Helicase 3 Couples IκB Kinase ε to Interferon Regulatory Factor 3 Activation. Molecular and Cellular Biology, 33 (10). pp. 2004-2015. ISSN 0270-7306

    Gu, Lili and Fullam, Anthony and McCormack, Niamh and Höhn, Yvette and Schroeder, Martina (2017) DDX3 directly regulates TRAF3 ubiquitination and acts as a scaffold to coordinate assembly of signalling complexes downstream of MAVS. Biochemical Journal, 474 (4). pp. 571-587. ISSN 0264-6021

    Gupta, Saket and Maratha, Ashwini and Siednienko, Jakub and Natarajan, Anandan and Gajanayake, Thusitha and Hoashi, Shu and Miggin, Sinead (2017) Analysis of inflammatory cytokine and TLR expression levels in Type 2 Diabetes with complications. Scientific Reports, 7. p. 7633. ISSN 2045-2322

    Guy, Adam and Gaffney, Michael and Kapranas, Apostolos and Griffin, Christine (2017) Conditioning the entomopathogenic nematodes Steinernema carpocapsae and Heterorhabditis megidis by pre-application storage improves efficacy against black vine weevil, Otiorhynchus sulcatus (Coleoptera: Curculionidae) at low and moderate temperatures. Biological Control, 108. pp. 40-46. ISSN 1049-9644

    H

    Haggerty, Leanne S. (2012) Exploring the Non-vertical Component of Bacterial Evolution Using Network Structures. PhD thesis, National University of Ireland Maynooth.

    Haggerty, Leanne S. and Jachiet, Pierre-Alain and Hanage, William P. and Fitzpatrick, David A. and Lopez, Philippe and O'Connell, Mary J. and Pisani, Davide and Wilkinson, Mark and Bapteste, Eric and McInerney, James O. (2014) A Pluralistic Account of Homology: Adapting the Models to the Data. Molecular Biology and Evolution, 31 (3). pp. 501-506. ISSN 0737-4038

    Haggerty, Leanne S. and Martin, Fergal J. and Fitzpatrick, David A. and McInerney, James O. (2009) Gene and genome trees conflict at many levels. Philosophical Transactions of the Royal Society B, 364 (1527). pp. 2209-2219. ISSN 0080-4622

    Hamilton, Sinead C. (2012) Environmentally Influenced Duplication Patterns Followed by Functional Shifts Fueling the Evolution of Metazoan Sensory Systems. PhD thesis, National University of Ireland Maynooth.

    Hammel, Stephen (2013) Characterising the response to gliotoxin exposure in Aspergillus fumigatus ΔgliT and ΔgliZ. PhD thesis, National University of Ireland Maynooth.

    Hams, Emily and Saunders, Sean P. and Cummins, Eoin P. and O'Connor, Aisling and Tambuwala, Murtaza T. and Gallagher, William M. and Byrne, Annette and Compos-Torres, Antonio and Moynagh, Paul N. and Jobin, Christian and Taylor, Cormac T and Fallon, Padraic G. (2011) The hydroxylase inhibitor DMOG attenuates endotoxic shock via alternative activation of macrophages and IL-10 production by B-1 cells. Shock, 36 (3). pp. 295-302. ISSN 1073-2322

    Hanuszkiewicz, Anna and Pittock, Paula and Humphries, Fiachra and Moll, Hermann and Rosales, Amanda Roa and Molinaro, Antonio and Moynagh, Paul N. and Lajoie, Gilles A. and Valvona, Miguel A. (2014) Identification of the Flagellin Glycosylation System in Burkholderia cenocepacia and the Contribution of Glycosylated Flagellin to Evasion of Human Innate Immune Responses. Journal of Biological Chemistry, 289 (27). pp. 19231-19244. ISSN 0021-9258

    Harting, Rebekka and Bayram, Ozgur and Laubinger, Karen and Valerius, Oliver and Braus, Gerhard H. (2013) Interplay of the fungal sumoylationnet work for control of multicellular development. Molecular Microbiology, 90 (5). pp. 1125-1145. ISSN 1365-2958

    Harvey, Christopher D. (2010) Ecological impact of entomopathogenic nematodes used to control the large pine weevil, Hylobius abietis (Coleoptera: Curculionidae). PhD thesis, National University of Ireland Maynooth.

    Harvey, Deirdre and Smith, Roisin and English, Karen and Mahon, Bernard P. and Commins, Sean (2006) Interleukin-10 (IL-10) but not Lipopolysaccharide (LPS) produces increased motor activity and abnormal exploratory patterns while impairing spatial learning in Balb/c mice. Physiology & Behavior, 87. pp. 842-847. ISSN 0031-9384/

    Harvey, Christopher D. and Alameen, Khalil M. and Griffin, Christine (2012) The impact of entomopathogenic nematodes on a non-target, service-providing longhorn beetle is limited by targeted application when controlling forestry pest Hylobius abietis. Biological Control, 62 (3). pp. 173-182. ISSN 1049-9644

    Harvey, Christopher D. and Griffin, Christine (2015) Local host-dependent persistence of the entomopathogenic nematode Steinernema carpocapsae used to control the large pine weevil Hylobius abietis. Biocontrol, 61 (2). pp. 185-193. ISSN 1386-6141

    Harvey, Christopher D. and Griffin, Christine (2012) Host activity and wasp experience affect parasitoid wasp foraging behaviour and oviposition on nematode-infected larvae of the forestry pest Hylobius abietis. Ecological Entomology, 37. pp. 269-282. ISSN 0307-6946

    Hasin, Naushaba (2012) Functional significance of Hsp70 post-translational modification in prion propagation and cellular function. PhD thesis, National University of Ireland Maynooth.

    Hasin, Naushaba and Cusack, Sarah and Ali, Shahin S. and Fitzpatrick, David A. and Jones, Gary W. (2014) Global transcript and phenotypic analysis of yeast cells expressing Ssa1, Ssa2, Ssa3 or Ssa4 as sole source of cytosolic Hsp70-Ssa chaperone activity. BMC Genomics, 15 (194). pp. 1-12. ISSN 1471-2164

    Hass, Birgit and Downes, Martin and Griffin, Christine (2001) Correlation between survival in water and persistence of infectivity in soil of Heterorhabditis spp. isolates. Nematology, 3 (6). pp. 573-579. ISSN 1388-5545

    Hasset, B. and Downes, Martin and Griffin, Christine (2002) Persistence of Four Heterorhabditis spp. Isolates in Soil: Role of Lipid Reserves1. Journal of Nematology, 34 (2). pp. 151-158. ISSN 0022-300X

    Hassett, S. and Moynagh, Paul N. and Reen, D. (2006) TNF-α is a mediator of the anti-inflammatory response in a human neonatal model of the non-septic shock syndrome. Pediatric Surgery International, 22 (1). pp. 24-30. ISSN 0179-0358

    He, Chao and Fitzpatrick, David A. and O'Halloran, Damien M. (2013) A comparative study of the molecular evolution of signalling pathway members across olfactory, gustatory and photosensory modalities. Journal of Genetics, 92 (2). pp. 327-334. ISSN 0022-1333

    He, Jianwei and Wang, Yu and Chang, Alan K. and Xu, Linan and Wang, Na and Chong, Xiaoying and Li, Hui and Zhang, Bing and Jones, Gary W. and Song, Youtao (2014) Myricetin Prevents Fibrillogenesis of Hen Egg White Lysozyme. Journal of Agricultural and Food Chemistry, 62. pp. 9442-9449. ISSN 0021-8561

    Healy, Marc E. (2015) A Delineation of Mesenchymal Stromal Cell Therapeutic Action in New Models of Acute and Chronic Graft versus Host Disease. PhD thesis, National University of Ireland Maynooth.

    Healy, Marc E. and Bergin, Ronan and Mahon, Bernard P. and English, Karen (2015) Mesenchymal Stromal Cells Protect Against Caspase 3-Mediated Apoptosis of CD19+ Peripheral B Cells Through Contact-Dependent Upregulation of VEGF. Stem Cells and Development, 24. pp. 2391-2402. ISSN 1547-3287

    Heggie, Laura and Jansen, Marcel A.K. and Burbridge, Emma and Kavanagh, Tony A. and Thorneley, Roger N.F. and Dix, Philip (2005) Transgenic tobacco (Nicotiana tabacum L. cv. Samsun-NN) plants over-expressing a synthetic HRP-C gene are altered in growth, development and susceptibility to abiotic stress. Plant Physiology and Biochemistry, 43 (12). pp. 1067-1073. ISSN 0981-9428

    Helmstaedt, Kerstin and Laubinger, Karen and Vosskuhl, Katja and Bayram, Ozgur and Busch, Silke and Hoppert, Michael and Valerius, Oliver and Seiler, Stephan and Braus, Gerhard H. (2008) The Nuclear Migration Protein NUDF/LIS1 Forms a Complex with NUDC and BNFA at Spindle Pole Bodies. Eukaryotic Cell, 7 (6). pp. 1041-1052. ISSN 1535-9778

    Henley, Beverley and Cohen, Bruce N. and Kim, Charlene H. and Gold, Heather D. and Srinivasan, Rahul and McKinney, Sheri and Deshpande, Purnima and Lester, Henry A. (2017) Reliable Identification of Living Dopaminergic Neurons in Midbrain Cultures Using RNA Sequencing and TH-promoter-driven eGFP Expression. Journal of Visualized Experiments, 120 (e54981). ISSN 1940-087X

    Hennessy, Roseanne (2012) Effects of a dual application of entomopathogenic nematodes and entomopathogenic fungi against a forest pest, Hylobius abietis L. (Coleoptera: Curculionidae) and a horticultural pest, Otiorhynchus sulcatus F. (Coleoptera: Curculionidae). Masters thesis, National University of Ireland Maynooth.

    Hmmier, Abduladim and O'Brien, Michael Emmet and Lynch, Vincent and Clynes, Martin and Morgan, Ross and Dowling, Paul (2017) Proteomic analysis of bronchoalveolar lavage fluid (BALF) from lung cancer patients using label-free mass spectrometry. BBA Clinical, 7. pp. 97-104. ISSN 2214-6474

    Hoegl, Sandra and Ehrentraut, Heidi and Brodsky, Kelley S. and Victorino, Francisco and Golden‐Mason, Lucy and Eltzschig, Holger K. and McNamee, Eóin N. (2017) NK cells regulate CXCR2+ neutrophil recruitment during acute lung injury. Journal of Leukocyte Biology, 101. pp. 471-480. ISSN 0741-5400

    Hogan, Andrew E. (2010) Characterisation of the immunomodulatory properties of human natural killer T cells. PhD thesis, National University of Ireland Maynooth.

    Hogan, Andrew and O'Reilly, Vincent and Dunne, Margaret R. and Dere, Ravindra T. and Zeng, Shijuan G. and O'Brien, Cashel and Amu, Sylvie and Fallon, Padraic G. and Exley, Mark A. and O'Farrelly, Cliona and Zhu, Xiangming and Doherty, Derek G. (2011) Activation of human invariant natural killer T cells with a thioglycoside analogue of α-galactosylceramide. Clinical Immunology, 140 (2). pp. 196-207. ISSN 1521-6616

    Hogan, Andrew and Tobin, A.M. and Ahern, T. and Corrigan, M.A. and Gaoatswe, G. and Jackson, R. and O’Reilly, V. and Lynch, L. and Doherty, D.G. and Moynagh, Paul N. and Kirby, B. and O’Connell, J. and O'Shea, D. (2011) Glucagon-like peptide-1 (GLP-1) and the regulation of human invariant natural killer Tcells: lessons from obesity, diabetes and psoriasis. Diabetologia, 54 (11). pp. 2745-2754. ISSN 0012-186X

    Holland, Ashling (2015) Proteomic Profiling of Animal Models of Motor Neuron Disease and Muscular Dystrophy. PhD thesis, National University of Ireland Maynooth.

    Holland, Ashling and Dowling, Paul and Ohlendieck, Kay (2014) New pathobiochemical insights into dystrophinopathy from the proteomics of senescent mdx mouse muscle. Frontiers in Aging Neuroscience, 6 (109). pp. 1-5. ISSN 1663-4365

    Holland, Ashling and Dowling, Paul and Zweyer, Margit and Swandulla, Dieter and Henry, Michael and Clynes, Martin and Ohlendieck, Kay (2013) Proteomic profiling of cardiomyopathic tissue from the aged mdx model of Duchenne muscular dystrophy reveals a drastic decrease in laminin, nidogen and annexin. Proteomics, 13 (15). pp. 2312-2323. ISSN 1615-9853

    Holland, Ashling and Schmitt-John, Thomas and Dowling, Paul and Meleady, Paula and Henry, Michael and Clynes, Martin and Ohlendieck, Kay (2014) Intricate effects of primary motor neuronopathy on contractile proteins and metabolic muscle enzymes as revealed by label-free mass spectrometry. Bioscience Reports, 34 (4). pp. 331-343. ISSN 1573-4935

    Holton, Therese A. (2011) Phylogenomic supertrees: integration of maximal data and assessment of input tree shape. PhD thesis, National University of Ireland Maynooth.

    Horgan, Alan (2012) Functional Characterisation of a Novel Tir-Domain containing Protein in Immune Signalling. Masters thesis, National University of Ireland Maynooth.

    Howard-Williams, Emma (2013) A Phylogeographic Study of Arenaria ciliata and Arenaria norvegica in Ireland and Europe. PhD thesis, National University of Ireland Maynooth.

    Humphries, Fiachra (2012) Investigating the regulation and enzymatic function of human ecsit in innate immune signalling. PhD thesis, National University of Ireland Maynooth.

    Humphries, Fiachra and Bergin, Ronan and Jackson, Ruaidhri and Delagic, Nezira and Wang, Bingwei and Yang, Shuo and Dubois, Alice V. and Ingram, Rebecca J. and Moynagh, Paul N. (2018) The E3 ubiquitin ligase Pellino2 mediates priming of the NLRP3 inflammasome. Nature Communications, 9 (1560). ISSN 2041-1723

    Humphries, Fiachra and Moynagh, Paul N. (2015) Molecular and physiological roles of Pellino E3 ubiquitin ligases in immunity. Immunological Reviews, 266 (1). pp. 93-108. ISSN 1600-065X

    Humphries, Fiachra and Yang, Shuo and Wang, Bingwei and Moynagh, Paul N. (2015) RIP kinases: key decision makers in cell death and innate immunity. Cell Death and Differentiation, 22. pp. 225-236. ISSN 1476-5403

    J

    Jackson, Ruaidhri (2013) Defining the Physiological and Molecular Role of Pellino3 in TLR3 Signalling. PhD thesis, National University of Ireland Maynooth.

    James-Arroyo, Rafael and Lara-Rojas, Fernando and Bayram, Ozgur and Valerius, Oliver and Braus, Gerhard H. and Aguirrea, Jesus (2015) The SrkA Kinase Is Part of the SakA Mitogen-Activated Protein Kinase Interactome and Regulates Stress Responses and Development in Aspergillus nidulans. Eukaryotic Cell, 14 (5). pp. 295-510. ISSN 1535-9778

    Jansen, Marcel A.K. and Elfstrand, Malin and Heggie, Laura and Sitbon, Folke and Dix, Philip and Thorneley, Roger N.F. (2004) Over-expression of phenol-oxidising peroxidases alters the UV-susceptibility of transgenic Nicotiana tabacum. New Phytologist, 163 (3). pp. 585-594. ISSN 0028-646X

    Jarmuda, Stanislaw and O’Reilly, Niamh and Zaba, Ryszard and Jakubowicz, Oliwia and Szkaradkiewicz, Andrzej and Kavanagh, Kevin (2012) The potential role of Demodex folliculorum mites and bacteria in the induction of rosacea. Journal of Medical Microbiology, 61 (11 ). pp. 1504-1510. ISSN 0022-2615

    Jarmuda, Stanislaw and McMahon, Fred and Zaba, Ryszard and O'Reilly, Niamh and Jakubowicz, Oliwia and Holland, Ashling and Szkaradkiewicz, Andrzej and Kavanagh, Kevin (2014) Correlation between serum reactivity to Demodex-associated Bacillus oleronius proteins, and altered sebum levels and Demodex populations in erythematotelangiectatic rosacea patients. Journal of Medical Microbiology, 63. pp. 258-262. ISSN 0022-2615

    Jockusch, Harald and Holland, Ashling and Staunton, Lisa and Schmitt-John, Thomas and Heimann, Peter and Dowling, Paul and Ohlendieck, Kay (2014) Pathoproteomics of testicular tissue deficient in the GARP component VPS54: The wobbler mouse model of globozoospermia. Proteomics, 14 (7-8). pp. 839-852. ISSN 1615-9853

    Johnk, Bastian and Bayram, Ozgur and Abelman, Anja and Heinekamp, Thorsten and Mattern, Derek J. and Brakhage, Axel A. and Jacobsen, Ilse D. and Valerius, Oliver and Braus, Gerhard H. (2016) SCF Ubiquitin Ligase F-box Protein Fbx15 Controls Nuclear Co-repressor Localization, Stress Response and Virulence of the Human Pathogen Aspergillus fumigatus. PLoS Pathogens, 12 (9). ISSN 1553-7374

    Johnson, Gemma and Ferrini, Arianna and Dolan, Stephen K. and Nolan, Tania and Agrawal, Samir and Doyle, Sean and Bustin, Stephen A. (2014) Biomarkers for invasive aspergillosis: the challenges continue. Biomarkers in Medicine, 8 (3). pp. 429-451. ISSN 1752-0363

    Johnstone, Catriona R. and O'Dushlaine, Colm and Fitzpatrick, David A. and Edwards, Richard J. and Shields, Denis C. (2007) Evaluation of Whether Accelerated Protein Evolution in Chordates Has Occurred before, after, or Simultaneously with Gene Duplication. Molecular Biology and Evolution, 24 (1). pp. 315-323. ISSN 0737-4038

    Jones, Gary and Song, Youtao and Chung, Seyung and Masison, Daniel C. (2004) Propagation of Saccharomyces cerevisiae [PSI] Prion Is Impaired by Factors That Regulate Hsp70 Substrate Binding. Molecular and Cellular Biology, 24 (9). pp. 3928-3937.

    Jones, Gary W. and Doyle, Sean and Fitzpatrick, David A. (2014) The evolutionary history of the genes involved in the biosynthesis of the antioxidant ergothioneine. Gene, 549 (1). pp. 161-170. ISSN 0378-1119

    Jones, Gary W. and Tuite, M.F. (2005) Chaperoning prions: the cellular machinery for propagating an infectious protein? BioEssays, 27. pp. 823-832.

    Jones, Jennifer C. and Brindley, Constance D. and Elder, Nicholas H. and Myers, Martin G. and Rajala, Michael W. and Dekaney, Christopher M. and McNamee, Eóin and Frey, Mark R. and Shroyer, Noah F. and Dempsey, Peter J. (2018) Cellular Plasticity of Defa4Cre-Expressing Paneth Cells in Response to Notch Activation and Intestinal Injury. Cellular and Molecular Gastroenterology and Hepatology, 7 (3). ISSN 2352-345X

    Joyce, Susan A. and Burnell, Ann and Powers, Thomas O. (1994) Characterization of Heferorhabdifis Isolates by PCR Amplification of Segments of mtDNA and rDNA Genes'. Journal of Nematology, 26 (3). pp. 260-270.

    K

    Kapranas, A. and Maher, Abigail M.D. and Griffin, Christine (2015) Higher relatedness mitigates mortality in a nematode with lethal male fighting. Journal of Evolutionary Biiology, 29 (2). pp. 344-351. ISSN 1010-061X

    Kapranas, Apostolos and Maher, Abigail M.D. and Griffin, Christine (2017) The influence of organic matter content and media compaction on the dispersal of entomopathogenic nematodes with different foraging strategies. Parasitology, 144 (14). pp. 1956-1963. ISSN 0031-1820

    Kapranas, Apostolos and Malone, Ben and Quinn, Sarajane and Mc Namara, Louise and Williams, Christopher D. and O'Tuama, Padraig and Peters, Arne and Griffin, Christine (2017) Efficacy of entomopathogenic nematodes for control of large pine weevil, Hylobius abietis: effects of soil type, pest density and spatial distribution. Journal of Pest Science, 90 (2). pp. 495-505. ISSN 1612-4758

    Kapranas, Apostolos and Malone, Ben and Quinn, Sarajane and O'Tuama, Padraig and Peters, Arne and Griffin, Christine (2017) Optimizing the application method of entomopathogenic nematode suspension for biological control of large pine weevil Hylobius abietis. Biocontrol, 62 (5). pp. 659-667. ISSN 1386-6141

    Karkman, Antti and Do, Thi Thuy and Walsh, Fiona and Virta, Marko P.J. (2018) Antibiotic-Resistance Genes in Waste Water. Trends in Microbiology, 26 (3). pp. 220-228. ISSN 0966-842X

    Katrak, K. and Mahon, Bernard P. and Minor, P.D. and Mills, K.H.G. (1991) Cellular and humoral immune responses to poliovirus in mice: a role for helper T cells in heterotypic immunity to poliovirus. Journal of General Virology, 72. pp. 1093-1098. ISSN 0022-1317

    Katrak, Kersi and Mahon, Bernard P. and Jones, Wendy C. and Briutigam, Sandra (1992) Preparative separation of foreign antigens for highly efficient presentation to T cells in vitro. Journal of Immunological Methods,, 156. pp. 247-254. ISSN 0022-1759

    Kavanagh, Heather (2010) Stem Cell and Biological Interventions to treat Allergic Airway Disease. PhD thesis, National University of Ireland Maynooth.

    Kavanagh, Kevin and Dowd, Susan (2004) Histatins: antimicrobial peptides with therapeutic potential. Journal of Pharmacy and Pharmacology, 56.

    Kavanagh, Kevin and Reeves, Emer P. (2004) Exploiting the potential of Insects for in vivo pathogenicity testing of Microbial pathogen. FEMS Microbiology Reviews, 28. pp. 101-112.

    Kavanagh, E.L. and Lindsay, S. and Halasz, M. and Gubbins, L.C. and Weiner-Gorzel, K. and Guang, M.H.Z. and McGoldrick, A. and Collins, E. and Henry, M. and Blanco-Fernández, A. and O'Gorman, Peter and Fitzpatrick, P. and Higgins, M.J. and Dowling, Paul and McCann, A. (2017) Protein and chemotherapy profiling of extracellular vesicles harvested from therapeutic induced senescent triple negative breast cancer cells. Oncogenesis, 6. e388. ISSN 2157-9024

    Kavanagh, H. and Mahon, Bernard P. (2010) Allogeneic mesenchymal stem cells prevent allergic airway inflammation by inducing murine regulatory T cells. Allergy, 66 (4). pp. 523-531. ISSN 1398-9995

    Kavanagh, H. and Noone, C. and Cahill, E. and English, Karen and Locht, C. and Mahon, Bernard P. (2010) Attenuated Bordetella pertussis vaccine strain BPZE1 modulates allergen-induced immunity and prevents allergic pulmonary pathology in a murine model. Clinical & Experimental Allergy, 40 (6). pp. 933-941. ISSN 1365-2222

    Kavanagh, Kevin and Fallon, John P. (2010) Galleria mellonella larvae as models for studying fungal virulence. Fungal Biology Reviews, 24 (1-2). pp. 79-83. ISSN 1749-4613

    Kavanagh, Kevin and Reeves, Emer P. (2007) Insect and Mammalian Innate Immune Responses Are Much Alike. Microbe, 2 (12). pp. 596-599. ISSN 1558-7460

    Kavanagh, Kevin and Walsh, M. and Whittaker, Peter A. (1991) Enhanced intraspecific protoplast fusion in yeast. FEMS Microbiology Letters, 81 (3). pp. 283-286. ISSN 0378-1097

    Kavanagh, Kevin and Whittaker, Peter A. (1996) Application of protoplast fusion to the nonconventional yeast. Enzyme and Microbial Technology, 18 (1). pp. 45-51. ISSN 0141-0229

    Kavanagh, Kevin and Whittaker, Peter A. (1994) Application of the Melle-Boinot process to the fermentation of xylose by Pachysolen tannophilus. Applied Microbiology and Biotechnology, 42 (1). pp. 28-31. ISSN 1432-0614

    Kavanagh, Kevin and Whittaker, Peter A. (1991) Funcelase — An efficient preparation for the isolation of reversion competent protoplasts from yeasts. Biotechnology Techniques, 5 (4). pp. 313-316. ISSN 0951-208X

    Kavanagh, Tony A. and Nguyen, Duc Thanh and Lao, Nga Thi and McGrath, Noreen and Peter, Stefan O. and Horvath, Eva and Dix, Philip and Medgyesy, Peter (1999) Homeologous Plastid DNA Transformation in Tobacco Is Mediated by Multiple Recombination Events. Genetics, 152. pp. 1111-1122. ISSN 0016-6731

    Keady, Sarah (2011) Examination of the expression of genes and proteins controlling M. longissimus thoracis et lumborum growth in steers. PhD thesis, National University of Ireland Maynooth.

    Keady, S.M. and Kenny, D.A. and Ohlendieck, Kay and Doyle, Sean and Keane, M.G. and Waters, S.M. (2013) Proteomic profiling of bovine M. longissimus lumborum from Crossbred Aberdeen Angus and Belgian Blue sired steers varying in genetic merit for carcass weight. Journal of Animal Science, 91 (2). pp. 654-665. ISSN 0021-8812

    Keane, T.M. and Naughton, Thomas J. and Travers, S.A.A. and McInerney, J.O. and McCormack, G.P. (2005) DPRml: distributed phylogeny reconstruction by maximum likelihood. Bioinformatics, 21 (7). pp. 969-974.

    Keane, Thomas and Creevey, Christopher and Pentony, Melissa and Naughton, Thomas J. and McInerney, James (2006) Assessment of methods for amino acid matrix selection and their use on empirical data shows that ad hoc assumptions for choice of matrix are not justified. BMC Evolutionary Biology, 6. pp. 29-46.

    Keane, Thomas and Page, Andrew and Naughton, Thomas J. and Travers, Simon and McInerney, James (2006) Building Large Phylogenetic Trees on Coarse-Grained Parallel Machines. Algorithmica, 45 (3). pp. 285-300.

    Keane, Thomas M. and Naughton, Thomas J. and McInerney, James O. (2007) MultiPhyl: a high-throughput phylogenomics webserver using distributed computing. Nucleic Acids Research, 35 (Web Server Issue). W33-W37. ISSN 0305-1048

    Keane, Orla M. and Toft, Christina and Carretero-Paulet, Lorenzo and Jones, Gary W. and Fares, Mario A. (2014) Preservation of Genetic and Regulatory Robustness in Ancient Gene Duplicates of Saccharomyces cerevisiae. Genome Research, 14. pp. 1-29. ISSN 1088-9051

    Keenan, Joanne and Joyce, Helena and Aherne, Sinead and O'Dea, Shirley and Doolan, Padraig and Lynch, Vincent and Clynes, Martin (2012) Olfactomedin III expression contributes to anoikis-resistance in clonal variants of a human lung squamous carcinoma cell line. Experimental Cell Research, 318 (5). pp. 593-602. ISSN 0014-4827

    Keith, Aidan M. and Boots, Bas and Hazard, Christina and Niechoj, Robin and Arroyo, Julio and Bending, Gary D. and Bolger, Tom and Breen, John and Clipson, Nicholas and Doohan, Fiona M. and Griffin, Christine and Schmidt, Olaf (2012) Cross-taxa congruence, indicators and environmental gradients in soils under agricultural and extensive land management. European Journal of Soil Biology, 49. pp. 55-62. ISSN 1164-5563

    Kellet, Andrew and O'Connor, Mark and McCann, Malachy and Howe, Orla and Casey, Alan and McCarron, Pauraic and Kavanagh, Kevin and McNamara, Mary and Kennedy, Sean and May, Donald D. and Skell, Philip S. and O'Shea, Denis and Devereux, Michael (2011) Water-soluble bis(1,10-phenanthroline) octanedioate Cu2+ and Mn2+ complexes with unprecedented nano and picomolar in vitro cytotoxicity: promising leads for chemotherapeutic drug development. MedChemComm, 2 (7). pp. 579-584. ISSN 2040-2503

    Kelly, Anna M. and Golden-Mason, Lucy and McEntee, Gerry and Traynor, Oscar and Doherty, Derek G. and Hegarty, John E. and O'Farrelly, Cliona (2004) Interleukin 12 (IL-12) is increased in tumour bearing human liver and expands CD8C and CD56C T cells in vitro but not in vivo. Cytokine, 25. pp. 273-282.

    Kelly, Judy and Kavanagh, Kevin (2011) Caspofungin primes the immune response of the larvae of Galleria mellonella and induces a non-specific antimicrobial response. Journal of Medical Microbiology, 60 (2). pp. 189-196. ISSN 0022-2615

    Kelly, Judy and Kavanagh, Kevin (2010) Proteomic analysis of proteins released from growth-arrested Candida albicans following exposure to caspofungin. Medical Mycology, 48 (4). pp. 598-605. ISSN 1460-2709

    Kelly-Rogers, Jane and Madrigal-Estebas, Laura and O'Connor, Tony and Doherty, Derek G. (2006) Activation-Induced Expression of CD56 by T Cells Is Associated With a Reprogramming of Cytolytic Activity and Cytokine Secretion Profile In Vitro. Human Immunology, 67. pp. 863-873.

    Kenis, M. and Wegensteiner, R. and Griffin, Christine (2004) Parasitoids, predators, nematodes and pathogens associated with bark weevil pests in Europe. In: UNSPECIFIED Kluwer Academic Publishers, pp. 395-414.

    Kenna, Tony and Golden-Mason, Lucy and Norris, Suzanne and Hegarty, John E. and O'Farrelly, Cliona and Doherty, Derek G. (2004) Distinct subpopulations of gy T cells are present in normal and tumor-bearing human liv. Clinical Immunology, 113 (1). pp. 56-63.

    Kenna, Tony and O'Brien, Margaret and Hogan, Andrew and Exley, Mark A. and Porcelli, Steven A. and Hegarty, John E. and O'Farrelly, Cliona and Doherty, Derek G. (2007) CD1 expression and CD1-restricted T cell activity in normal and tumour-bearing human liver. Cancer Immunology, Immunotherapy, 56 (4). pp. 563-572. ISSN 1432-0851

    Kennelly, Helen (2015) Investigation of efficacy and mechanisms of action in mesenchymal stromal cell therapy for chronic lung diseases. PhD thesis, National University of Ireland Maynooth.

    Kennelly, Helen and Mahon, Bernard P. and English, Karen (2016) Human mesenchymal stromal cells exert HGF dependent cytoprotective effects in a human relevant pre-clinical model of COPD. Scientific Reports, 6 (38207). ISSN 2045-2322

    Kerr, S. and O'Keeffe, Grainne and Kilty, C. and Doyle, Sean (1999) Undenatured parvovirus B19 antigens are essential for the accurate detection of parvovirus B19 IgG. Journal of Medical Virology, 57 (2). pp. 179-185. ISSN 0146-6615

    Khan, Faheem and Mat, Arimin and Hogan, Andrew E. and Kent, Brian D. and Eigenheer, Sonia and Corrigan, Michelle and O'Sheal, Donal and Butler, Marcus W. (2017) Preliminary asthma-related outcomes following glucagon-like peptide 1 agonist therapy. QJM: An International Journal of Medicine, 110 (12). pp. 853-854. ISSN 1460-2725

    Kilty, Cormac and Doyle, Sean and Hassett, Brian and Manning, Fiona (1998) Glutathione S-transferases as biomarkers of organ damage: applications of rodent and canine GST enzyme immunoassays. Chemico-Biological Interactions, 111. pp. 123-135. ISSN 0009-2797

    Kinsella, Rhoda J. and Fitzpatrick, David A. and Creevey, Christopher J. and McInerney, James O. (2003) Fatty acid biosynthesis in Mycobacterium tuberculosis: Lateral gene transfer, adaptive evolution, and gene duplication. Proceedings of the National Academy of Sciences, 100 (18). pp. 10320-10325. ISSN 1091-6490

    Kis, Mihaly and Burbridge, Emma and Brock, Ian M. and Heggie, Laura and Dix, Philip and Kavanagh, Tony A. (2004) An N-terminal Peptide Extension Results in Efficient Expression, but not Secretion, of a Synthetic Horseradish Peroxidase Gene in Transgenic Tobacco. Annals of Botany, 93 (3). pp. 303-310. ISSN 0305-7364

    Krappman, Sven and Bayram, Ozgur and Braus, Gerhard H. (2005) Deletion and Allelic Exchange of the Aspergillus fumigatus veA Locus via a Novel Recyclable Marker Module. Eukaryotic Cell, 4 (7). pp. 1298-1307. ISSN 1535-9778

    Krippendorff, Ben-Fillippo and Kuester, Katharina and Kloft, Charlotte and Huisinga, Wilhelm (2009) Nonlinear pharmacokinetics of therapeutic proteins resulting from receptor mediated endocytosis. Journal of Pharmacokinetics and Pharmacodynamics , 36 (3). pp. 239-260. ISSN 1567-567X

    Krippendorff, Ben-Fillippo and Neuhaus, Roland and Lienau, Philip and Reichel, Andreas and Huisinga, Wilhelm (2009) Mechanism-based Inhibition: Deriving KI and kinact directly from Time-Dependent IC50 Values. Journal of Biomedical Screening, 14 (8). pp. 913-923. ISSN 1087-0571

    Kuczera, Tanja and Bayram, Ozgur and Sari, Fatih and Braus, Gerhard H. and Irniger, Stefan (2010) Dissection of mitotic functions of the yeast cyclin Clb2. Cell Cycle, 9 (13). pp. 2611-2619. ISSN 1538-4101

    Kullyev, Audrey and Dempsey, Catherine M. and Miller, Sarah and Kuan, Chih-Jen and Hapiak, Vera M. and Komuniecki, Richard W. and Griffin, Christine and Sze, Ji Ying (2010) A Genetic Survey of Fluoxetine Action on Synaptic Transmission in Caenorhabditis elegans. Genetics, 186 (3). pp. 929-941. ISSN 0016-6731

    Kumar, Niraj and Maurya, Priyanka and Gammell, Patrick and Dowling, Paul and Clynes, Martin and Meleady, Paula (2008) Proteomic Profiling of Secreted Proteins from CHO Cells Using Surface-Enhanced Laser Desorption Ionization Time-of-Flight Mass Spectrometry. Biotechnology Progress, 24 (1). pp. 273-278. ISSN 8756-7938

    L

    Labaude, Sophie and Griffin, Christine (2018) Transmission Success of Entomopathogenic Nematodes Used in Pest Control. Insects, 9 (72). ISSN 2075-4450

    Lacey, N. and Delaney, S. and Kavanagh, Kevin and Powell, F.C. (2007) Mite-related bacterial antigens stimulate inflammatory cells in rosacea. British Journal of Dermatology, 157. pp. 474-481.

    Lacey, N. and Delaney, S. and Kavanagh, Kevin and Powell, F.C. (2007) Mite-related bacterial antigens stimulate inflammatory cells in rosacea. British Journal of Dermatology.

    Lacey, N. and Kavanagh, Kevin and Tseng, Scheffer C.G. (2009) Under the lash: Demodex mites in human diseases. Biochemist, 31 (4). pp. 2-6. ISSN 0954-982X

    Larkin, Dearbhlaith Ellen (2018) A proteomic and cytological characterisation of the buff-tailed bumblebee (Bombus terrestris) fat body and haemolymph -An immune perspective. PhD thesis, National University of Ireland Maynooth.

    Law, Carolyn and Kavanagh, Kevin and Whittaker, Peter A. (1994) Analysis of hybrids of Candida albicans formed by protoplast fusion. FEMS Microbiology Letters, 115 (1). pp. 77-82. ISSN 0378-1097

    Le Martret, Benedicte and Poage, Miranda and Shiel, Karen and Nugent, Gregory D. and Dix, Philip (2011) Tobacco chloroplast transformants expressing genes encoding dehydroascorbate reductase, glutathione reductase, and glutathione-S-transferase, exhibit altered anti-oxidant metabolism and improved abiotic stress tolerance. Plant Biotechnology Journal, 9 (6). pp. 661-673. ISSN 1467-7644

    Lebreton, Sandrine and Andreescu, Simona and Graciet, Emmanuelle and Gontero, Brigitte (2006) Mapping of the interaction site of CP12 with glyceraldehyde-3-phosphate dehydrogenase from Chlamydomonas reinhardtii. FEBS Journal, 273 (14). pp. 3358-3369. ISSN 1742-464X

    Lebreton, Sandrine and Graciet, Emmanuelle and Gontero, Brigitte (2003) Modulation, via Protein-Protein Interactions, of Glyceraldehyde-3-phosphate Dehydrogenase Activity through Redox Phosphoribulokinase Regulation. Journal of Biological Chemistry, 278 (14). pp. 12078-12084. ISSN 0021-9258

    Lelivelt, Cilia L.C. and McCabe, Matthew S. and Newell, Christine A. and de Snoo, C. Bastiaan and van Dun, Kees M.P. and Birch-Machin, Ian and Gray, John C. and Mills, Kingston H.G. and Nugent, Jacqueline M. (2005) Stable plastid transformation in lettuce (Lactuca sativa L.). Plant Molecular Biology, 58 (6). pp. 763-774. ISSN 0167-4412

    Leonard, Siobhan (2015) Therapeutic Approaches to Insulin Resistance and Type 2 Diabetes. PhD thesis, National University of Ireland Maynooth.

    Lewis, Caroline (2010) Identification and characterisation of novel marker proteins involved in X-linked muscular dystrophy. PhD thesis, National University of Ireland Maynooth.

    Lewis, Caroline and Jockusch, Harald and Ohlendieck, Kay (2010) Proteomic Profiling of the Dystrophin-Deficient MDX Heart Reveals Drastically Altered Levels of KeyMetabolic and Contractile Proteins. Journal of Biomedicine and Biotechnology, 2010 (648501). pp. 1-20. ISSN 1110-7243

    Lewis, Edwin E. and Campbell, James and Griffin, Christine and Kaya, Harry and Peters, Arne (2006) Behavioral ecology of entomopathogenic nematodes. Biological Control, 38. pp. 66-79.

    Lewis, Caroline and Ohlendieck, Kay (2011) Mass spectrometric identification of dystrophin isoform Dp427 by on-membrane digestion of sarcolemma from skeletal muscle. Analytical Biochemistry, 404 (2). pp. 197-203. ISSN 0003-2697

    Lewis, Caroline and Ohlendieck, Kay (2010) Proteomic profiling of naturally protected extraocular muscles from the dystrophin-deficient mdx mouse. Biochemical and Biophysical Research Communications, 396 (4). pp. 1024-1029. ISSN 0006-291X

    Li, Jianjing and O'Reilly, Niamh and Sheha, Hosam and Katz, Raananah and Raju, Vadrevu K. and Kavanagh, Kevin and Scheffer, C. G. Tseng (2010) Correlation between Ocular Demodex Infestation and Serum Immunoreactivity to Bacillus Proteins in Patients with Facial Rosacea. Ophthalmology, 117 (5). pp. 870-877. ISSN 0161-6420

    Li, Ou and English, Karen (2013) Human iPSC-derived mesoangioblasts, like their tissue-derived counterparts, suppress T cell proliferation through IDO- and PGE-2-dependent pathways. F1000 Research, 2 (24).

    Lian, Hui-Yong and Jiang, Yi and Zhang, Hong and Jones, Gary and Perrett, Sarah (2006) The yeast prion protein Ure2: Structure, function and folding. Biochimica et Biophysica Acta - Proteins and Proteomics, 1764 (3). pp. 535-545.

    Lohan, James and Culligan, Kevin and Ohlendieck, Kay (2005) Deficiency in Cardiac Dystrophin Affects the Abundance of the α-/β-Dystroglycan Complex. Journal of Biomedicine and Biotechnology, 2005 (1). pp. 28-36. ISSN 1110-7243

    Lohan, James and Ohlendieck, Kay (2004) Drastic reduction in the luminal Ca2+-binding proteins calsequestrin and sarcalumenin in dystrophin-deficient cardiac muscle. Biochimica et Biophysica Acta, 1689 (3). pp. 252-258. ISSN 0925-4439

    Lola-Luz, Theodora and Downes, Martin and Dunne, Richard (2005) Control of Black Vine Weevil larvae Otiorhynchus sulcatus (Fabricius) (Coleoptera:Curculionidae) in grow bags outdoors with nematodes. Agricultural and Forest Entomology, 7. pp. 121-126.

    Lowther, Jonathan and Robinson, Mark W. and Donnelly, Sheila M. and Xu, Weibo and Stack, Colin M. and Matthews, Jacqueline M. and Dalton, John P. (2009) The Importance of pH in Regulating the Function of the Fasciola hepatica Cathepsin L1 Cysteine Protease. PLoS Neglected Tropical Diseases, 3 (1). pp. 1-11. ISSN 1935-2727

    Lynch, Eilish M. and Earley, Bernadette and McGee, Mark and Doyle, Sean (2010) Characterisation of physiological and immunological responses in beef cows to abrupt weaning and subsequent housing. BMC Veterinary Research, 6 (37). pp. 1-8. ISSN 1746-6148

    Lynch, Eilish M. and McGee, Mark and Doyle, Sean and Earley, Bernadette (2012) Effect of pre-weaning concentrate supplementation on peripheral distribution of leukocytes, functional activity of neutrophils, acute phase protein and behavioural responses of abruptly weaned and housed beef calves. BMC Veterinary Research, 8 (1). ISSN 1746-6148

    Lynch, Eilish Mairéad (2010) Characterisation of physiological and immune-related biomarkers of weaning stress in beef cattle. PhD thesis, National University of Ireland Maynooth.

    Lynch, E.M. and Earley, B. and McGee, M. and Doyle, Sean (2010) Effect of abrupt weaning at housing on leukocyte distribution, functional activity of neutrophils, and acute phase protein response of beef calves. BMC Veterinary Research, 6 (39). pp. 1-9. ISSN 1746-6148

    Lynch, E.M. and McGee, M. and Doyle, Sean and Earley, B. (2011) Effect of post-weaning management practices on physiological and immunological responses of weaned beef calves. Irish Journal of Agricultural and Food Research, 50 (2). pp. 161-174. ISSN 07916833

    Lynn, David J. and Higgs, Rowan and Gaines, Susan and Tierney, Joanna and James, Tharappel and Lloyd, Andrew T. and Fares, Mario A. and Mulcahy, Grace and O'Farrelly, Cliona (2004) Bioinformatic discovery and initial characterisation of nine novel antimicrobial peptide genes in the chicken. Immunogenetics, 56 (3). pp. 170-176.

    Lynn, David J. and Lloyd, Andrew T. and Fares, Mario A. and O'Farrelly, Cliona (2004) Evidence of Positively Selected Sites in Mammalian a-Defensins. Molecular Biology and Evolution, 21 (5). pp. 819-827.

    Lynn, Thérése Marion (2015) The Role of Bone Morphogenetic Protein Signalling in Adult Lung Health and Disease. PhD thesis, National University of Ireland Maynooth.

    M

    Ma, Julian K-C. and Barros, Eugenia and Bock, Ralph and Christou, Paul and Dal, Philip J. and Dix, Philip and Fischer, Rainer and Irwin, Judith and Mahoney, Richard and Pezzotti, Mario and Schillberg, Stefan and Sparrow, Penny and Stoger, Eva and Twyman, Richard M. (2005) Molecular farming for new drugs and vaccines. Current perspectives on the production of pharmaceuticals in transgenic plants. EMBO Reports, 6 (7). pp. 593-599. ISSN 1469-221X

    Madigan, Gillian (2012) Evaluation of Different Methods for the Detection of Mycobacterium bovis in Lymph Node Tissue. Masters thesis, National University of Ireland Maynooth.

    Madsen, Declan and Cantwell, Emma R. and O'Brien, Timothy and Johnson, Patricia A. and Mahon, Bernard P. (2009) Adeno-associated virus serotype 2 induces cell-mediated immune responses directed against multiple epitopes of the capsid protein VP1. Journal of General Virology, 90 (11). pp. 2622-2633. ISSN 1465-2099

    Madsen, Declan Paul (2009) The Immunology of Adeno-Associated Virus Serotype 2. PhD thesis, National University of Ireland Maynooth.

    Maffioletti, Sara Martina and Noviello, Maddalena and English, Karen and Tedesco, Francesco Saverio (2014) Stem Cell Transplantation for Muscular Dystrophy: The Challenge of Immune Response. Boomed Research International (964010). ISSN 2314-6141

    Magruire, Oral and Duggan, Ronan (2016) Evaluation of Galleria mellonella larvae as an in vivo model for assessing the relative toxicity of food preservative agents. Cell Biology and Toxicology, 43 (3). pp. 209-216. ISSN 1573-6822

    Maguire, Patricia and Ohlendieck, Kay (1996) Oligomerization of sarcoplasmic reticulum Ca2+‐ATPase from rabbit skeletal muscle. FEBS Letters, 396. pp. 115-118. ISSN 0014-5793

    Maguire, Ronan Cathal (2017) The development of Galleria mellonella as a model to test the toxicity of food additives. PhD thesis, National University of Ireland Maynooth.

    Maguire, Ronan Cathal and Kunc, Martin and Hyrsl, Pavel and Kavanagh, Kevin (2017) Analysis of the acute response of Galleria mellonella larvae to potassium nitrate. Comparative Biochemistry and Physiology Part c, 195. pp. 44-51. ISSN 1532-0456

    Maguire, Ronan Cathal and Kunc, Martin and Hyrsl, Pavel and Kavanagh, Kevin (2017) Caffeine administration alters the behaviour and development of Galleria mellonella larvae. Neurotoxicology and Teratology, 64. pp. 37-44. ISSN 0892-0362

    Maher, Abigail M.D. (2014) Co-existence and niche separation of two subspecies of Photorhabdus temperata associated with Heterorhabditis downesi in a dune grassland. PhD thesis, National University of Ireland Maynooth.

    Maher, Abigail M.D. and Asaiyah, Mohamed A. M. and Brophy, Caroline and Griffin, Christine (2017) An Entomopathogenic Nematode Extends Its Niche by Associating with Different Symbionts. Microbial Ecology, 73 (1). pp. 211-223. ISSN 0095-3628

    Maher, Amie (2017) Analysis of the Role of Bacillus oleronius Proteins in the Induction of Rosacea and Evaluation of Novel Therapeutics for the Treatment of Dermal and Ocular Rosacea. PhD thesis, National University of Ireland Maynooth.

    Mahon, Bernard P. (2000) The Irish Society for Immunology. Immunology Letters, 73.

    Mahon, Bernard P. and Brady, Miriam and Mills, Kingston H. (2000) Protection against Bordetella pertussis in mice in the absence of detectable circulating antibody: implications for long-term immunity in children. The Journal of Infectious Diseases, 181. pp. 2087-2091.

    Mahon, Bernard P. and Corcoran, Amanda and McParland, Peter and Davoren, Anne and Doyle, Sean (2003) Ex Vivo Cytokine responses against Parvovirus B19 Antigens in previously infected pregnant women. Journal of Medial Virology, 70 (3). pp. 475-480. ISSN 0146-6615

    Mahon, Bernard P. and Doyle, Sean and Kavanagh, Kevin and Corcoran, Amanda and Ennis, O. (2001) Baculovirus expression of parvovirus B19 (B19V) NS1: utility in confirming recent infection. Journal of Clinical Virology, 22 (1). pp. 55-60. ISSN 1386-6532

    Mahon, Bernard P. and Ennis, D.P. and Cassidy, J.P. (2004) Prior Bordetella pertussis infection modulates allergen priming and the severity of airway pathology in a murine model of allergic asthma. Journal of Clinical and Experimental Allergy.

    Mahon, Bernard P. and Ennis, Darren P. and Cassidy, Joseph P. (2004) Whole-cell pertussis vaccine protects against Bordetella pertussis exacerbation of allergic asthma. Immunology Letters, xxx. pp. 1-10.

    Mahon, Bernard P. and Flynn, Marion A. (2003) Cell Mediated and Humoral Immune responses to Mumps Virus: Recent Developments. Recent Research Developments in Virology, 5. pp. 97-115.

    Mahon, Bernard P. and Flynn, Marion A. and Casey, David G. and Todryk, Stephen M. (2004) Efficient delivery of small interfering RNA for inhibition of IL-12p40 expression in vivo. Journal of Inflammation, 1 (4). pp. 1-12.

    Mahon, Bernard P. and Katrak, Kersi and Mills, Kingston H.G. (1992) Antigenic Sequences of Poliovirus Recognized by T Cells: Serotype-Specific Epitopes on VP1 and VP3 and Cross-Reactive Epitopes on VP4 Defined by Using CD4+ T-Cell Clones. Journal of Virology, 66 (12). pp. 7012-7020. ISSN 0022-538X

    Mahon, Bernard P. and Katrak, Kersi and Nomoto, Akio and Macadam, Andrew J. and Minor, Philip D. and Mills, Kingston H.G. (1995) Poliovirus-spectfic CD4 + Thl Clones with Both Cytotoxic and Helper Activity Mediate Protective Humoral Immunity against a Lethal Poliovirus Infection in Transgenic Mice Expressing the Human Poliovirus Receptor. Journal of Experimental Medicine, 181. pp. 1285-1292. ISSN 0022-1007

    Mahon, Bernard P. and Mills, Kingston H. (1999) Interferon-g mediated immune effector mechanisms against Bordetella pertussis. Immunology Letters, 68. pp. 213-217.

    Mahon, Bernard P. and Ryan, Mark S. and Griffin, Fiona and Mills, Kingston H.G. (1996) Interleukin-12 Is Produced by Macrophages in Response to Live or Killed Bordetella pertussis and Enhances the Efficacy of an Acellular Pertussis Vaccine by Promoting Induction of Th1 Cells. Infection and Immunity, 64 (12). pp. 5295-5301. ISSN 0019-9567

    Mahon, Bernard P. and Sheahan, Brian J. and Griffin, Fiona and Murphy, Geraldine (1997) Atypical Disease after Bordetella pertussis Respiratory Infection of Mice with Targeted Disruptions of Interferon-y Receptor or Immunoglobulin µ Chain Genes. Journal of Experimental Medicine, 186 (11). pp. 1843-1851. ISSN 0022-1007

    Mahony, Shaun and McInerney, James O. and Smith, Terry J. and Golden, Aaron (2004) Gene prediction using the Self-Organizing Map: automatic generation of multiple gene models. BMC Bioinformatics, 5 (1). p. 23.

    Majer, Petra and Czegeny, Gyula and Sandor, Gyorgyi and Dix, Philip and Hideg, Eva (2014) Antioxidant defence in UV-irradiated tobacco leaves is centred on hydrogen-peroxide neutralization. Plant Physiology and Biochemistry, 82. pp. 239-243. ISSN 0981-9428

    Maliga, P. and Zsuzsa, R. and Dix, Philip and Lazar, Gabriella (1979) A Streptomycin-Resistant Line of Nicotiana sylvestris Unable to Flower. Molecular and General Genetics, 172 (1). pp. 13-15.

    Maliga, Pal and Xuan, Le Thi and Dix, Philip and Cseplo, Agnes (1980) Antibiotic resistance in Nicotiana. In: Plant Cell Cultures: Results and Perspectives. Developments in Plant Biology, 5 . Elsevier, Holland, pp. 161-166. ISBN 0-444-80204-5

    Malone, R. and Horvfith, G.V. and Cseplo, A. and Bfizfis, B. and Dix, Philip and Medgyesy, P. (1992) Impact of the stringency of cell selection on plastid segregation in protoplast fusion-derived Nicotiana regenerates. Theoretical and Applied Genetics, 84. pp. 866-873.

    Malone, R.P. and Dix, Philip (1990) Mutagenesis and Triazine Herbicide Effects in Strawberry Shoot Cultures. Journal of Expermental Botany, 41 (225). pp. 463-469.

    Malpas, Simon C. and Leonard, Bridget L. and Guild, Sarah-Jane and Ringwood, John and Navakatikyan, Michael and Austin, Paul C. and Head, Geoffrey A. and Burgess, Don E. (2001) The sympathetic nervous system's role in regulating blood pressure variability. IEEE Engineering in Medicine and Biology Magazine, 20 (2). pp. 17-24. ISSN 0739-5175

    Malynn, Sandra and Campos-Torres, Antonio and Moynagh, Paul N. and Haas, Jana (2013) The Pro-inflammatory Cytokine TNF-a Regulates the Activity and Expression of the Serotonin Transporter (SERT) in Astrocytes. Neurochemical Research, 38 (4). pp. 694-704. ISSN 0364-3190

    Manfiolli, Adriana Oliveira and Alves de Castro, Patricia and Fernanda dos Reis, Thaila and Dolan, Stephen K. and Doyle, John and Jones, Gary W. and Riano-Pachon, Diego Mauricio and Ulas, Mevlut and Noble, Luke M. and Mattern, Derek J. and Brakhage, Axel A. and Valiante, Vito and Silva-Rocha, Rafael and Bayram, Ozgur and Goldman, Gustavo H. (2017) Aspergillus fumigatus protein phosphatase PpzA is involved in iron assimilation, secondary metabolite production, and virulence. Cellular Microbiology, 19 (e12770). ISSN 1462-5822

    Manfiolli, Adriana Oliveira and Mattos, Eliciane Cevolani and de Assis, Leandro José and Silva, Lilian Pereira and Ulas, Mevlut and Brown, Neil Andrew and Bayram, Ozgur and Goldman, Gustavo H. (2019) Aspergillus fumigatus High Osmolarity Glycerol Mitogen Activated Protein Kinases SakA and MpkC Physically Interact During Osmotic and Cell Wall Stresses. Frontiers in Microbiology, 10 (918). ISSN 1664-302X

    Manzanares Miralles, Lara (2015) Investigating and exploiting fungal natural products in Aspergillus spp. PhD thesis, National University of Ireland Maynooth.

    Manzanares-Miralles, Lara and Bayram, Ozgur and Sarikaya-Bayram, Ozlem and Smith, Elizabeth B. and Dolan, Stephen K. and Jones, Gary W. and Doyle, Sean (2016) Quantitative proteomics reveals the mechanism and consequence of gliotoxin-mediated dysregulation of the methionine cycle in Aspergillus niger. Journal of Proteomics, 131. pp. 149-162. ISSN 1874-3919

    Margalit, Anatte and Kavanagh, Kevin (2015) The innate immune response to Aspergillus fumigatus at the alveolar surface. FEMS Microbiology Reviews, 39 (5). pp. 670-687. ISSN 0168-6445

    Margalit, Anatte and Kowalczyk, Michał J. and Zaba, Ryszard and Kavanagh, Kevin (2016) The role of altered cutaneous immune responses in the induction and persistence of rosacea. Journal of Dermatological Science, 82 (1). pp. 3-8. ISSN 0923-1811

    Mark, Jacob and Fernando, Shahan D. and Masterson, Joanne C. and Pan, Zhaoxing and Capocelli, K.E. and Furuta, G.T. and de Zoeten, Edwin F. (2018) Clinical Implications of Pediatric Colonic Eosinophilia. Journal of Pediatric Gastroenterology and Nutrition, 66 (5). pp. 760-766. ISSN 1536-4801

    Marquesa, Marco P.C. and Walshe, Kieran and Doyle, Sean and Fernandesa, Pedro and de Carvalhoa, Carla C.C.R. (2012) Anchoring high-throughput screening methods to scale-up bioproduction of siderophores. Process Biochemistry, 47 (3). pp. 416-421. ISSN 1359-5113

    Martin, Fergal (2009) Exploring the boundaries of shallow phylogeny in the YESS group and the dynamics of gene cluster and operon formation in bacterial genomes. PhD thesis, National University of Ireland Maynooth.

    Martin, Fergal J. and McInerney, James O. (2009) Recurring cluster and operon assembly for Phenylacetate degradation genes. BMC Evolutionary Biology, 9. p. 36. ISSN 1471-2148)

    Marusic, Carla and Vitale, Allessandro and Pedrazzini, Emanuela and Donini, Marcello and Frigerio, Lorenzo and Bock, Ralph and Dix, Philip and McCabe, Matthew S. and Bellucci, Michele and Benvenuto, Eugenio (2009) Plant-based strategies aimed at expressing HIV antigens and neutralizing antibodies at high levels. Nef as a case study. Transgenic Research, 18 (4). pp. 499-512. ISSN 0962-8819

    Mason, Oliver and Verwoerd, Mark (2007) Graph Theory and Networks in Biology. IET Systems Biology, 1 (2). pp. 89-119. ISSN 1751-8857

    Masterson, Joanne C. and O'Dea, Shirley (2007) Posttranslational Truncation of E-Cadherin and Significance for Tumour Progression. Cells Tissues Organs, 185. pp. 175-179. ISSN 1422-6405

    Matijssen, C. and Kinsella, G.K. and Watson, G.W. and Rozas, I. (2012) Computational study of the proton affinity and basicity of structurally diverse a1-adrenoceptor ligands. Journal of Physical Organic Chemistry, 25. pp. 351-360. ISSN 0894-3230

    Maurer, Elisabeth and Browne, Niall and Surlis, Carla and Jukic, Emina and Moser, Patrizia and Kavanagh, Kevin and Lass-Flörl, Cornelia and Binder, Ulrike (2015) Galleria mellonella as a host model to study Aspergillus terreus virulence and amphotericin B resistance. Virulence, 6 (6). pp. 591-598. ISSN 2150-5608

    McBride, Shirley and Rannie, D. and Harrison, D.J. (2000) Gene transfer to adult human lung tissue ex vivo. Gene Therapy, 7 (8). pp. 675-678. ISSN 0969-7128

    McBride, Shirley and Tatrai, Erzsebet and Blundell, Renald and Kovacikova, Zuzana and Cardozo, Lorraine and Adamis, Zoltan and Smith, Tim and Harrison, David J. (2000) Characterisation of lectin binding patterns of mouse bronchiolar and rat alveolar epithelial cells in culture. Histochemical Journal, 32 (1). pp. 33-40. ISSN 0018-2214

    McCabe, Matthew and Klaas, Manfred and Gonzalez-Rabade, Nuria and Poage, Miranda and Badillo-Corona, Jesus A. and Zhou, Fei and Karcher, Daniel and Bock, Ralph and Gray, John C. and Dix, Philip (2008) Plastid transformation of high-biomass tobacco variety Maryland Mammoth for production of human immunodeficiency virus type 1 (HIV-1) p24 antigen. Plant Biotechnology Journal, 6 (9). pp. 914-929. ISSN 1467-7644

    McCabe, P.F. and Timmons, A.M. and Dix, Philip (1989) A simple procedure for the isolation of streptomycin resistant plants in Solanaceae. Molecular and General Genetics, 216 (1). pp. 132-137.

    McCann, Malachy and Curran, Robert and Ben-Shoshan, Marcia and McKie, Vicky and Ali Tahir, Asif and Devereux, Michael and Kavanagh, Kevin and Creaven, Bernadette S. and Kellet, Andrew (2012) Silver(I) complexes of 9-anthracenecarboxylic acid and imidazoles: synthesis, structure and antimicrobial activity. Dalton Transactions, 41 (21). 6516-6527 . ISSN 1477-9226

    McCann, Malachy and Santos, Andre L. S. and Da Silva, Bianca A. and Romanos, Maria Teresa V. and Pyrrho, Alexandre S. and Devereux, Michael and Kavanagh, Kevin and Fichtnerg, Iduna and Kellett, Andrew (2012) In vitro and in vivo studies into the biological activities of 1,10-phenanthroline, 1,10-phenanthroline-5,6-dione and its copper(II) and silver(I) complexes. Toxicology Research, 1 (1). pp. 47-54. ISSN 2045-452X

    McCann, Angela and Cotton, James A. and McInerney, James O. (2008) The tree of genomes: An empirical comparison of genome-phylogeny reconstruction methods. BMC Evolutionary Biology, 8 (312). pp. 1-3. ISSN 1471-2148

    McCann, Malachy and Coyle, Barry and McKay, Sinead and McCormack, Paul and Kavanagh, Kevin and Devereux, Michael and McKee, Vickie and Kinsella, Paula and O'Connor, Robert and Clynes, Martin (2004) Synthesis and X-ray crystal structure of [Ag(phendio)2]ClO4 (phendio = 1,10-phenanthroline-5,6-dione) and its effects on fungal and mammalian cells. Biometals, 17 (6). pp. 635-645. ISSN 0966-0844

    McCann, Malachy and Curran, Robert and Ben-Shoshan, Marcia and McKee, Vickie and Devereux, Michael and Kavanagh, Kevin and Kellett, Andrew (2013) Synthesis, structure and biological activity of silver(I) complexes of substituted imidazoles. Polyhedron, 56. pp. 180-188. ISSN 0277-5387

    McCann, Malachy and McGinley, John and Ni, Kaijie and O'Connor, Mark and Kavanagh, Kevin and McKee, Vickie and Colleran, John and Devereux, Michael and Gathergood, Nicholas and Barron, Niall and Prisecarue, Andree and Kellett, Andrew (2013) A new phenanthroline–oxazine ligand: synthesis, coordination chemistry and atypical DNA binding interaction. Chemical Communications, 49 (23). pp. 2341-2343. ISSN 1359-7345

    McCarron, Pauraic and McCann, Malachy and Devereux, Michael and Kavanagh, Kevin and Skerry, Ciaran M. and Karakousis, Petros C. and Aor, Ana C. and Mello, Thaís P. and Santos, Andre L. S. and Campos, Débora L. and Pavan, Fernando R. (2018) Unprecedented in Vitro Antitubercular Activity of Manganese(II) Complexes Containing 1,10-Phenanthroline and Dicarboxylate Ligands: Increased Activity, Superior Selectivity, and Lower Toxicity in Comparison to Their Copper(II) Analogs. Frontiers in Microbiology, 9 (01432). ISSN 1664-302X

    McCarthy, Charley G.P. and Fitzpatrick, David A. (2017) Multiple Approaches to Phylogenomic Reconstruction of the Fungal Kingdom. Advances in genetics, 100. pp. 211-266. ISSN 0065-2660

    McCarthy, Charley G.P. and Fitzpatrick, David A. (2017) Phylogenomic Reconstruction of the Oomycete Phylogeny Derived from 37 Genomes. Msphere, 2 (2). ISSN 2379-5042

    McCarthy, Charley G.P. and Fitzpatrick, David A. (2016) Systematic Search for Evidence of Interdomain Horizontal Gene Transfer from Prokaryotes to Oomycete Lineages. Msphere, 1 (5). ISSN 2379-5042

    McCarthy, Elaine and Stack, Colin and Donnelly, Sheila M. and Doyle, Sean and Mann, Victoria H. and Brindley, Paul J. and Stewart, Michael and Day, Tim A. and Maule, Aaron G. and Dalton, John P. (2004) Leucine aminopeptidase of the human blood flukes, Schistosoma mansoni and Schistosoma japonicum. International Journal of Parasitology, 34 (6). pp. 703-714. ISSN 0020-7519

    McClean, Siobhan and Healy, Mark E. and Collins, Cassandra and Carberry, Stephen and O'Shaughnessy, Like and Dennehy, Ruth and Adams, Aine and Kennelly, Helen and Corbett, Jennifer and Carty, Fiona and Cahill, Laura A. and Callaghan, Maire and English, Karen and Mahon, Bernard P. and Doyle, Sean and Shinoy, Minu (2016) Linocin and OmpW Are Involved in Attachment of the Cystic Fibrosis-Associated Pathogen Burkholderia cepacia Complex to Lung Epithelial Cells and Protect Mice against Infection. Infection and Immunity, 84 (5). pp. 1424-1437. ISSN 0019-9567

    McCormack, Christine C. and Hobson, Audrey H. and Doyle, Sean and Jackson, John and Kilty, Cormac and Whitehead, Alexander S. (1996) Generation of soluble recombinant human acute phase serum amyloid A2 protein and its use in the development of an A-SAA specific ELISA. Journal of Immunological Methods, 198 (1). pp. 101-110. ISSN 0022-1759

    McCormack, Natasha and Molloy, Emer L. and O'Dea, Shirley (2013) Bone morphogenetic proteins enhance an epithelial-mesenchymal transition in normal airway epithelial cells during restitution of a disrupted epithelium. Respiratory Research, 14 (36). ISSN 1465-9921

    McCormack, Natasha and O'Dea, Shirley (2013) Regulation of epithelial to mesenchymal transition by bone morphogenetic proteins. Cellular Signalling, 25 (12). pp. 2856-2862. ISSN 0898-6568

    McCrea, Zita (2015) Development of Jetting Techniques for the Delivery of Mesenchymal Stromal Cells for Therapeutic Applications. PhD thesis, National University of Ireland Maynooth.

    McDermott, Martina S.J. and Browne, Brigid C. and Conlon, Neil T. and O'Brien, Neil A. and Slamon, Dennis J. and Henry, Michael and Meleady, Paula and Clynes, Martin and Dowling, Paul and Crown, John and O'Donovan, Norma (2014) PP2A inhibition overcomes acquired resistance to HER2 targeted therapy. Molecular Cancer, 13 (157). pp. 1-12. ISSN 1476-4598

    McGauran, Anne-Marie T. and Moore, J. Bernadette and Madsen, Declan and Barry, Daniel and O'Dea, Shirley and Mahon, Bernard P. and Commins, Sean (2008) A Possible Role for Protein Synthesis, Extracellular Signal-Regulated Kinase, and Brain-Derived Neurotrophic Factor in Long-Term Spatial Memory Retention in the Water Maze. Behavioral Neuroscience, 122 (4). pp. 805-815. ISSN 0735-7044

    McGill, Lorraine M. (2011) A Molecular and Phylogenetic Analysis of Cryobiosis in Nematodes of the Genus Panagrolaimus. PhD thesis, National University of Ireland Maynooth.

    McGill, Lorraine M. and Fitzpatrick, David A. and Pisani, Davide and Burnell, Ann (2017) Estimation of phylogenetic divergence times in Panagrolaimidae and other nematodes using relaxed molecular clocks calibrated with insect and crustacean fossils. Nematology, 19 (8). pp. 899-913. ISSN 1568-5411

    McGinley, John and McCann, Malachy and Ni, Kaijie and Tallon, Theresa M. and Kavanagh, Kevin and Devereux, Michael and Ma, Xiaomei and McKee, Vickie (2013) Imidazole Schiff base ligands: Synthesis, coordination complexes and biological activities. Polyhedron, 55. pp. 169-178. ISSN 0277-5387

    McInerney, James (2006) On the desirability of models for inferring genome phylogenies. Trends in Microbiology, 14 (1). pp. 1-2.

    McInerney, James O. (2006) The causes of protein evolutionary rate variation. Trends in Ecology and Evolution, 21 (5). pp. 230-232.

    McInerney, James O. and Wilkinson, Mark (2005) New methods ring changes for the tree of life. Trends in Ecology and Evolution, 20 (3). pp. 105-107.

    McInerney, James O. and Wilkinson, Mark and Patching, John W. and Embley, T. Martin and Powell, Richard (1995) Recovery and Phylogenetic Analysis of Novel Archaeal rRNA Sequences from a Deep-Sea Deposit Feeder. Applied and Environmental Microbiology (AEM), 61 (4). pp. 1646-1648. ISSN 1098-5336

    McMahon, Fred and Banville, Nessa and Bergin, David and Smedman, Christian and Paulie, Staffan and Reeves, Emer P. and Kavanagh, Kevin (2016) Activation of Neutrophils via IP3 Pathway Following Exposure to Demodex-Associated Bacterial Proteins. Inflammation, 39 (1). pp. 425-433. ISSN 1573-2576

    McMahon, Frederick W. (2015) An Analysis of the Role of Bacillus oleronius Proteins in the Pathogenesis of Ocular Rosacea. PhD thesis, National University of Ireland Maynooth.

    McMahon, Frederick W. and Gallagher, Clair and O'Reilly, Niamh and Clynes, Martin and O'Sullivan, Finbarr and Kavanagh, Kevin (2014) Exposure of a Corneal Epithelial Cell Line (hTCEpi) to Demodex-Associated Bacillus Proteins Results in an Inflammatory Response. Investigative Ophthalmology & Visual Science, 55 (10). pp. 7019-7028. ISSN 0146-0404

    McNamara, Louise (2016) Interactions of entomopathogenic fungi and other control agents: mechanism and field potential against Hylobius abietis larvae. PhD thesis, National University of Ireland Maynooth.

    McNamara, Louise and Carolan, James C. and Griffin, Christine and Fitzpatrick, David A. and Kavanagh, Kevin (2017) The effect of entomopathogenic fungal culture filtrate on the immune response of the greater wax moth, Galleria mellonella. Journal of Insect Physiology, 100. pp. 82-92. ISSN 0022-1910

    McNamara, Louise and Griffin, Christine and Fitzpatrick, David A. and Kavanagh, Kevin and Carolan, James C. (2018) The effect of entomopathogenic fungal culture filtrate on the immune response and haemolymph proteome of the large pine weevil, Hylobius abietis. Insect Biochemistry and Molecular Biology, 101. pp. 1-13. ISSN 0965-1748

    McNamee, E.N. and Biette, K.A. and Hammer, J.A. and Harris, R. and Miyazawa, H. and Lee, J.J. and Furuta, G.T. and Masterson, Joanne C. (2017) Targeting granulocyte‐macrophage colony‐stimulating factor in epithelial and vascular remodeling in experimental eosinophilic esophagitis. Allergy, 72. pp. 1232-1242. ISSN 1398-9995

    McNamee, Eóin (2019) Neutrophil-derived microRNAs put the (DNA) breaks on intestinal mucosal healing. Journal of Clinical Investigation, 129 (2). pp. 499-502. ISSN 1558-8238

    McNamee, Eóin N. and Rivera-Nieves, Jesus (2017) Defective Lymphatics in Crohn’s Disease: Tertiary Lymphoid Follicles Plug the Gap. Gastroenterology, 152 (4). pp. 908-910. ISSN 0016-5085

    McQuaid, Kate (2013) The Interactions for the RBP Receptor, Stimulated by Retinoic Acid Gene 6. PhD thesis, National University of Ireland Maynooth.

    McWeeney, Hilton Donal (2011) Phenotypic variation in Photorhabdus temperata K122. PhD thesis, National University of Ireland Maynooth.

    Meade, Conor (2005) A new species of Uvaria (Annonaceae) from Southeast Asia. Adansonia, 27 (1). pp. 17-20. ISSN 1639-4798

    Meade, Conor and Mullins, Ewen (2005) GM Crop Cultivation in Ireland: Ecological and Economic Considerations. Biology and Environment: Proceedings of the Royal Irish Academy, 105B (1). pp. 33-52. ISSN 0791-7945

    Meade, Conor and Parnell, J.A.N. (2003) Multivariate analysis of leaf shape patterns in Asian species of the Uvaria group (Annonaceae). Botanical Journal of the Linnean Society, 143 (3). pp. 231-242. ISSN 1095-8339

    Meade, Conor and Parnell, J.A.N. (2002) Neotypification of Uvaria hirsuta Jack (Annonaceae). Taxon, 51 (4). pp. 767-768. ISSN 0040-0262

    Meager, Anthony and Parti, Sharan and Leung, Helen and Peil, Elizabeth and Mahon, Bernard P. (1987) Preparation and Characterization of Monoclonal Antibodies Directed Against Antigenic Determinants of Recombinant Human Tumour Necrosis Factor (rTNF). Hybridoma, 6 (3). pp. 305-311. ISSN 1554-0014

    Medema, M.H. and Kottmann, R. and Yilmaz, P. and Cummings, M. and Biggins, J.B. and Blin, K. and de Bruijn, I. and Chooi, Y.H. and Claesen, J. and Coates, R.C. and Cruz-Morales, P. and Duddela, S. and Düsterhus, S. and Edwards, D.J. and Fewer, D.P. and Garg, N. and Geiger, C. and Gomez-Escribano, J.P. and Greule, A. and Hadjithomas, M. and Haines, A.S. and Helfrich, E.J. and Hillwig, M.L. and Ishida, K. and Jones, A.C. and Jones, C.S. and Jungmann, K. and Kegler, C. and Kim, H.U. and Kötter, P. and Krug, D. and Masschelein, J. and Melnik, A.V. and Mantovani, S.M. and Monroe, E.A. and Moore, M. and Moss, N. and Nützmann, H.W. and Pan, G. and Pati, A. and Petras, D. and Reen, F.J. and Rosconi, F. and Rui, Z. and Tian, Z. and Tobias, N.J. and Tsunematsu, Y. and Wiemann, P. and Wyckoff, E. and Yan, X. and Yim, G. and Yu, F. and Xie, Y. and Aigle, B. and Apel, A.K. and Balibar, C.J. and Balskus, E.P. and Barona-Gómez, F. and Bechthold, A. and Bode, H.B. and Borriss, R. and Brady, S.F. and Brakhage, A.A. and Caffrey, P. and Cheng, Yo and Clardy, J. and Cox, R.J. and De Mot, R. and Donadio, S. and Donia, M.S. and van der Donk, W.A. and Dorrestein, P.C. and Doyle, Sean and Driessen, A.J. and Ehling-Schulz, M. and Entian, K.D. and Fischbach, M.A. and Gerwick, L. and Gerwick, W.H. and Gross, H. and Gust, B. and Hertweck, C. and Höfte, M. and Jensen, S.E. and Ju, J. and Katz, L. and Kaysser, L. and Klassen, J.L. and Keller, N.P. and Kormanec, J. and Kuipers, O.P. and Kuzuyama, T. and Kyrpides, N.C. and Kwon, H.J. and Lautru, S. and Lavigne, R. and Lee, C.Y. and Linquan, B. and Liu, X. and Liu, W. and Luzhetskyy, A. and Mahmud, T. and Mast, Y. and Méndez, C. and Metsä-Ketelä, M. and Micklefield, J. and Mitchell, D.A. and Moore, B.S. and Moreira, L.M. and Muller, R. and Neilan, B.A. and Nett, M. and Nielsen, J. and O'Gara, F. and Oikawa, H. and Osbourn, A. and Osburne, M.S. and Ostash, B. and Payne, S.M. and Pernodet, J.L. and Petricek, M. and Piel, J. and Ploux, O. and Raaijmakers, J.M. and Salas, J.A. and Schmitt, E.K. and Scott, B. and Seipke, R.F. and Shen, B. and Sherman, D.H. and Sivonen, K. and Smanski, M.J. and Sosio, M. and Stegmann, E. and Süssmuth, R.D. and Tahlan, K. and Thomas, C.M. and Tang, Y. and Truman, A.W. and Viaud, M. and Walton, J.D. and Walsh, C.T. and Weber, T. and van Wezel, G.P. and Wilkinson, B. and Willey, J.M. and Wohlleben, W. and Wright, G.D. and Ziemert, N. and Zhang, C. and Zotchev, S.B. and Breitling, R. and Takano, E. and Glöckner, F.O. (2015) Minimum Information about a Biosynthetic Gene cluster. Nature Chemical Biology, 11 (9). pp. 625-631. ISSN 1552-4469

    Medina, Edgar M. and Jones, Gary W. and Fitzpatrick, David A. (2011) Reconstructing the Fungal Tree of Life Using Phylogenomics and a Preliminary Investigation of the Distribution of Yeast Prion-Like Proteins in the Fungal Kingdom. Journal of Molecular Evolution, 73 (3-4). pp. 116-133. ISSN 0022-2844

    Mellett, Mark and Atzei, Paola and Jackson, Ruaidhri and O’Neill, Luke A. and Moynagh, Paul N. (2011) Mal Mediates TLR-Induced Activation of CREB and Expression of IL-10. Journal of Immunology, 186 (8). pp. 4925-4935. ISSN 0022-1767

    Mellett, Mark and Atzei, Paola and Bergin, Ronan and Horgan, Alan and Floss, Thomas and Wurst, Wolfgang and Callanan, John J. and Moynagh, Paul N. (2015) Orphan receptor IL-17RD regulates Toll-like receptor signalling via SEFIR/TIR interactions. Nature Communications, 6 (6669). ISSN 2041-1723

    Mellett, Mark and Atzei, Paola and Horgan, Alan and Hams, Emily and Floss, Thomas and Wurst, Wolfgang and Fallon, Padraic G. and Moynagh, Paul N. (2012) Orphan receptor IL-17RD tunes IL-17A signalling and is required for neutrophilia. Nature Communications, 3 (1119). ISSN 2041-1723

    Miggin, Sinead and Palsson-McDermott, Eva M. and Dunne, Aisling and Jefferies, Caroline and Pinteaux, Emmanuel and Banahan, Kathy and Murphy, Caroline and Moynagh, Paul N. and Yamamoto, Masahiro and Akira, Shizuo and Rothwell, Nancy and Golenbock, Douglas and Fitzgerald, Katherine A. and O'Neill, Luke A.J. (2007) NF-kB activation by the Toll-IL-1 receptor domain protein MyD88 adapter-like is regulated by caspase-1. Proceedings of the National Academy of Sciences, 104 (9). pp. 3372-3377. ISSN 1091-6490

    Miller, Catherine M. D. and Smith, Nicholas C. and Ikin, Rowan J. and Boulter, Nicola R. and Dalton, John P. and Donnelly, Sheila (2009) Immunological Interactions between 2 Common Pathogens, Th1-Inducing Protozoan Toxoplasma gondii and the Th2-Inducing Helminth Fasciola hepatica. PLoS ONE, 4 (5 e5692). pp. 1-10. ISSN 1932-6203

    Mills, Kingston and Ryan, Mark and McGuirk, Peter and Griffin, Fiona and Murphy, Geraldine and Mahon, Bernard P. (1999) The Immunology of Bordetella pertussis Infection. Biologicals, 27. p. 77.

    Mills, Kingston H.G. and Kitchin, Peter A. and Mahon, Bernard P. and Barnard, Amanda L. and Adams, Sally E. and Kingsman, Susan M. and Kingsman, Alan J. (1990) HIV p24-Specific Helper T Cell Clones From Immunised Primates Recognize Highly Conserved Regions of HIV-l. Journal of Immunology, 144 (5). pp. 1677-1683. ISSN 0022-1767

    Mills, Kingston H.G. and Ryan, Mark and Ryan, Elizabeth and Mahon, Bernard P. (1998) A murine model in which protection correlates with pertussis vaccine efficacy in children reveals complementary roles for humoral and cell-mediated immunity in protection against Bordetella pertussis. Infection and Immunity, 66 (2). pp. 594-602. ISSN 0019-9567

    Miraula, Manfredi (2016) Metallo-β-lactamase-like enzymes from non-pathogenic organisms: an illustration of functional promiscuity. PhD thesis, National University of Ireland Maynooth.

    Miricescu, Alexandra (2019) Identification and generation of new germplasms in barley with increased tolerance to waterlogging. PhD thesis, National University of Ireland Maynooth.

    Molloy, Emer Louise (2008) Bone Morphogenetic Protein Signalling in Adult Lung Epithelial Cells. PhD thesis, National University of Ireland Maynooth.

    Moloney, Nicola M. and Owens, Rebecca A. and Meleady, Paula and Henry, Michael and Dolan, Stephen K. and Mulvihill, Eoin and Clynes, Martin and Doyle, Sean (2016) The iron-responsive microsomal proteome of Aspergillus fumigatus. Journal of Proteomics, 136. pp. 99-111. ISSN 1874-3919

    Moran, Ciara (2010) Mutational analysis of Hsp110 suggests an integral role for the chaperone in yeast prion propagation. PhD thesis, National University of Ireland Maynooth.

    Moran, Ciara and Kinsella, Gemma K. and Zhang, Zai-Rong and Perrett, Sarah and Jones, Gary W. (2013) Mutational Analysis of Sse1 (Hsp110) Suggests an Integral Role for this Chaperone in Yeast Prion Propagation In Vivo. G3. ISSN 2160-1836

    Morris, Karen S. and Horgan, Finbarr G. and Downes, Martin and Griffin, Christine (2011) The effect of temperature on hatch and activity of second-stage juveniles of the root-knot nematode, Meloidogyne minor, an emerging pest in north-west Europe. Nematology, 13 (8). pp. 985-993. ISSN 1388-5545

    Morris, K. and Horgan, F.G. and Griffin, Christine (2013) Spatial and temporal dynamics of Meloidogyne minor on creeping bentgrass in golf greens. Plant Pathology, 62. pp. 1166-1172. ISSN 0032-0862

    Mowlds, Peter and Kavanagh, Kevin (2008) Effect of pre-incubation temperature on susceptibility of Galleria mellonella larvae to infection by Candida albicans. Mycopathologia, 165. pp. 5-12.

    Mowlds, Peter and Barron, Aoife and Kavanagh, Kevin (2008) Physical stress primes the immune response of Galleria mellonella larvae to infection by Candida albicans. Microbes and Infection, 10 (6). pp. 628-634. ISSN 1286-4579

    Mowlds, Peter and Coates, Christopher and Renwick, Julie and Kavanagh, Kevin (2010) Dose-dependent cellular and humoral responses in Galleria mellonella larvae following β-glucan inoculation. Microbes and Infection, 12 (2). pp. 146-153. ISSN 1286-4579

    Moynagh, Paul N. (2003) Toll-like receptor signalling pathways as key targets for mediating the anti-inflammatory and immunosuppressive effects of glucocorticoids. Journal of Endocrinology, 179 (2). pp. 139-144. ISSN 0022–0795

    Moynagh, Paul N. (2005) The interleukin-1 signalling pathway in astrocytes: a key contributor to inflammation in the brain. Journal of Anatomy, 207 (3). pp. 265-269. ISSN 0021-8782

    Moynagh, Paul N. (2005) The NF-κB pathway. Journal of Cell Science, 118. pp. 4589-4592. ISSN 0021-9533

    Moynagh, Paul N. (2011) Peli1 (rel)ieves autoimmunity. Nature Immunology, 12 (10). pp. 927-929. ISSN 1529-2908

    Moynagh, Paul N. (2009) The Pellino family: IRAK E3 ligases with emerging roles in innate immune signalling. Trends in Immunology, 30 (1). pp. 33-42. ISSN 1471-4906

    Moynagh, Paul N. (2005) TLR signalling and activation of IRFs: revisiting old friends from the NF-κB pathway. Trends in Immunology, 26 (9). pp. 469-476. ISSN 1471-4906

    Mujahid, Muhammad and Trendafilova, Natasha and Foltyn Arfa-Kia, Agnieszka and Rosair, Georgina and Kavanagh, Kevin and Devereux, Michael and Walsh, Maureen and McClean, Siobhan and Creaven, Bernadette S. and Georgieva, Ivelina (2016) Novel silver(I) complexes of coumarin oxyacetate ligands and their phenanthroline adducts: Biological activity, structural and spectroscopic characterisation. Journal of Inorganic Biochemistry, 163. pp. 53-67. ISSN 0162-0134

    Mullen, Edel (2011) Proteomic profiling of skeletal muscle tissue from the Goto-Kakizaki rat model of type 2 diabetes. PhD thesis, National University of Ireland Maynooth.

    Mullen, Edel and O'Reilly, Elaine and Ohlendieck, Kay (2011) Skeletal muscle tissue from the Goto-Kakizaki rat model of type-2 diabetes exhibits increased levels of the small heat shock protein Hsp27. Molecular Medicine Reports, 4. pp. 229-236. ISSN 1791-2997

    Mullen, Edel and Ohlendieck, Kay (2011) Proteomic analysis of the mitochondria-enriched fraction from diabetic rat skeletal muscle. Journal of Integrated Omics, 1 (1). pp. 108-114. ISSN 2182-0287

    Mullen, Edel and Ohlendieck, Kay (2010) Proteomic profiling of non-obese type 2 diabetic skeletal muscle. International Journal of Molecular Medicine, 25 (3). pp. 445-458. ISSN 1107-3756

    Mulvey, Claire and Harno, Erika and Keenan, Alan and Ohlendieck, Kay (2005) Expression of the skeletal muscle dystrophin–dystroglycan complex and syntrophin-nitric oxide synthase complex is severely affected in the type 2 diabetic Goto–Kakizaki rat. European Journal of Cell Biology, 84 (11). pp. 867-883. ISSN 0171-9335

    Mulvey, Claire and Ohlendieck, Kay (2003) Use of continuous-elution gel electrophoresis as a preparative tool for blot overlay analysis. Analytical Biochemistry, 319 (1). pp. 122-130. ISSN 0003-2697

    Mulvihill, Eoin (2014) Transcriptomic and proteomic analysis of anhydrobiosis in Panagrolaimus superbus and Caenorhabditis elegans dauer larvae. PhD thesis, National University of Ireland Maynooth.

    Mulvihill, Eoin and Moloney, Nicola M. and Owens, Rebecca A. and Dolan, Stephen K. and Russell, Lauren and Doyle, Sean (2017) Functional Investigation of Iron-Responsive Microsomal Proteins, including MirC, in Aspergillus fumigatus. Frontiers in Microbiology, 8 (418). ISSN 1664-302X

    Muniyappa, M.K. and Dowling, Paul and Henry, M. and Meleady, Paula and Doolan, P. and Gammell, P. and Clynes, Martin and Barron, N. (2009) MiRNA-29a regulates the expression of numerous proteins and reduces the invasiveness and proliferation of human carcinoma cell lines. European Journal of Cancer, 45 (17). pp. 3104-3118. ISSN 0959-8049

    Murphy, A.R. and Kavanagh, Kevin (2001) Adherence of clinical isolates of Saccharomyces cerevisiae to buccal epithelial cells. Medical Mycology, 39 (1). pp. 123-127. ISSN 1232-986X

    Murphy, Alan and Kavanagh, Kevin (1999) Emergence of Saccharomyces cerevisiae as a human pathogen Implications for biotechnology. Enzyme and Microbial Technology, 25 (7). pp. 551-557. ISSN 0141-0229

    Murphy, Sandra (2018) Proteomic Characterisation of the mdx-4cv mouse model of Duchenne Muscular Dystrophy. PhD thesis, National University of Ireland Maynooth.

    Murphy, Sandra and Brinkmeier, Heinrich and Krautwald, Mirjam and Henry, Michael and Meleady, Paula and Ohlendieck, Kay (2017) Proteomic profiling of the dystrophin complex and membrane fraction from dystrophic mdx muscle reveals decreases in the cytolinker desmoglein and increases in the extracellular matrix stabilizers biglycan and fibronectin. Journal of Muscle Research and Cell Motility, 38 (2). pp. 251-368. ISSN 0142-4319

    Murphy, Sandra and Dowling, Paul and Zweyer, Margit and Henry, Michael and Meleady, Paula and Mundegar, Rustam R. and Swandulla, Dieter and Ohlendieck, Kay (2017) Proteomic profiling of mdx-4cv serum reveals highly elevated levels of the inflammation-induced plasma marker haptoglobin in muscular dystrophy. International Journal of Molecular Medicine, 39 (6). pp. 1357-1370. ISSN 1791-244X

    Murphy, Sandra and Ohlendieck, Kay (2017) Mass spectrometric identification of dystrophin, the protein product of the Duchenne muscular dystrophy gene, in distinct muscle surface membranes. International Journal of Molecular Medicine, 40 (4). pp. 1078-1088. ISSN 1107-3756

    N

    Nahlik, Krystyna and Dumkow, Marc and Bayram, Ozgur and Helmstaedt, Kerstin and Busch, Silke and Valerius, Oliver and Gerke, Jennifer and Hoppert, Michael and Schwier, Elke U. and Opitz, Lennart and Westermann, Mieke and Grond, Stephanie and Feussner, Kirstin and Goebel, Cornelia and Kaever, Alexander and Meinicke, Peter and Feussner, Ivo and Braus, Gerhard H. (2010) The COP9 signalosome mediates transcriptional and metabolic response to hormones, oxidative stress protection and cell wall rearrangement during fungal development. Molecular Microbiology, 78 (4). pp. 964-979. ISSN 0950-382X

    Neudecker, Viola and Haneklaus, Moritz and Jensen, Owen and Khailova, Ludmila and Masterson, Joanne C. and Tye, Hazel and Biette, Kathryn and Jedlicka, Paul and Brodsky, Kelley S. and Gerich, Mark E. and Mack, Matthias and Robertson, Avril A.B and Cooper, Matthew A. and Furuta, Glenn T. and Dinarello, Charles A. and O’Neill, Luke A. and Eltzschig, Holger K. and Masters, Seth L. and McNamee, Eóin N. (2017) Myeloid-derived miR-223 regulates intestinal inflammation via repression of the NLRP3 inflammasome. Journal of Experimental Medicine, 214 (6). p. 1737. ISSN 0022-1007

    Neville, Claire and Murphy, Alan and Kavanagh, Kevin and Doyle, Sean (2005) A 4'-Phosphopantetheinyl Transferase Mediates Non-Ribosomal Peptide Synthetase Activation in Aspergillus fumigatus. ChemBioChem, 6 (4). pp. 679-685.

    Nguyen, Kim-Hong and Jordi, Wilco and Van Dun, Kees and Schepers, Frank (2008) Delayed Senescence in Cauliflower Transformed with an Autoregulated Isopentenyl Transferase Gene. International Journal of Plant Sciences, 169 (3). pp. 339-347. ISSN 1058-5893

    Nguyen, N. and Fernando, S.T. and Biette, K.A. and Hammer, J.A. and Capocelli, K.E. and Kitzenberg, D.A. and Glover, L.E. and Colgan, S.P. and Furuta, G.T. and Masterson, Joanne C. (2017) TGF-β1 alters esophageal epithelial barrier function by attenuation of claudin-7 in eosinophilic esophagitis. Mucosal immunology, 11. pp. 415-426. ISSN 1935-3456

    Nguyen, T.T. and Dix, Philip and Nugent, Gregory D. (2010) Transformation of potato via Agrobacterium coated microparticle bombardment. Biologia Plantarum, 54 (1). pp. 141-144. ISSN 006-3134

    Nguyen, Thanh Thi and Nugent, Gregory and Cardi, Teodoro and Dix, Philip (2005) Generation of homoplasmic plastid transformants of a commercial cultivar of potato (Solanum tuberosum L.). Plant Science, 168. pp. 1495-1450. ISSN 0168-9452

    Nic An Ultaigh, Sinéad and Carolan, James C. and Britton, Collette and Murray, Linda and Ryan, Michael F. (2009) A cathepsin L-like protease from Strongylus vulgaris: An orthologue of Caenorhabditis elegans CPL-1. Experimental Parasitology, 121 (4). pp. 293-299. ISSN 0014-4894

    Nikdel, Mostafa and Niknam, Gholamreza and Griffin, Christine and Kary, Naser Eivazian (2010) Diversity of entomopathogenic nematodes (Nematoda: Steinernematidae, Heterorhabditidae) from Arasbaran forests and rangelands in north-west Iran. Nematologica, 12 (5). pp. 767-773. ISSN 0028-2596

    Nogueira da Costa, Andre and Kenn, Jeffrey N. and Wild, Christopher P. and Findlay, John B. C. (2011) An analysis of the phosphoproteome of immune cell lines exposed to the immunomodulatory mycotoxin deoxynivalenol. Biochimica et Biophysica Acta - Proteins and Proteomics, 1814 (7). pp. 850-857. ISSN 1570-9639

    Noone, Cariosa M. and Lewis, Ellen A. and Frawely, Anne B. and Newman, Robert W. and Mahon, Bernard P. and Mills, Kingston H. and Johnson, Patricia A. (2005) Novel mechanism of immunosuppression by influenza virus haemagglutinin: selective suppression of interleukin 12 p35 transcription in murine bone marrow-derived dendritic cells. Journal of General Virology, 86. pp. 1885-1890.

    Noone, Cariosa M. and Kihm, Anthony and English, Karen and O'Dea, Shirley (2013) IFN-γ Stimulated Human Umbilical-Tissue-Derived Cells Potently Suppress NK Activation and Resist NK-Mediated Cytotoxicity In Vitro. Stem Cells and Development, 22. pp. 3003-3014. ISSN 1557-8534

    Noone, Cariosa M. and Lewis, Ellen A. and Frawely, Anne B. and Newman, Robert W. and Mahon, Bernard P. and Mills, Kingston H. and Johnson, Patricia A. (2005) Novel mechanism of immunosuppression by influenza virus haemagglutinin: selective suppression of interleukin 12 p35 transcription in murine bone marrow-derived dendritic cells. Journal of General Virology, 86. pp. 1885-1890.

    Nugent, Miriam J. and O'Leary, Sean A. and Burnell, Ann (1996) Optimised procedures for the cryopreservation of different species of Heterorhabditis. Fundalmental Applied Nematology, 19 (1). pp. 1-6.

    Nugent, Gregory D. and Coyne, Seamus and Nguyen, Thi T. and Kavanagh, Tony A. and Dix, Philip (2006) Nuclear and plastid transformation of Brassica oleracea var. botrytis (cauliflower) using PEG-mediated uptake of DNA into protoplasts. Plant Science, 170 (1). pp. 135-142. ISSN 0168-9452

    Nugent, Gregory D. and ten Have, M. and van der Gulik, A. and Dix, Philip and Mordhorst, A.P. and Uijtewaal, B.A. (2005) Plastid transformants in tomato selected using mutations affecting ribosome structure. Plant Cell Reports, 24 (6). pp. 341-349. ISSN 0721-7714

    O

    O'Brien, Jennifer (2012) Using Saccharomyces cerevisiae to characterise the in vivo effects of exposure to the prion-curing drug Tacrine and the fungal metabolite gliotoxin. PhD thesis, National University of Ireland Maynooth.

    O'Brien, Martin and Spillane, Charles and Meade, Conor and Mullins, Ewen (2008) An Insight into the Impact of Arable Farming on Irish Biodiversity: A Scarcity of Studies Hinders a Rigorous Assessment. Biology and Environment: Proceedings of the Royal Irish Academy, 108B (2). pp. 97-108. ISSN 0791-7945

    O'Brien, Caoimhe E. and McCarthy, Charley G.P. and Walshe, Annie E. and Shaw, Dennis R. and Sumski, Deirdre A. and Krassowski, Tadeusz and Fitzpatrick, David A. and Butler, Geraldine (2018) Genome analysis of the yeast Diutina catenulata, a member of the Debaryomycetaceae/Metschnikowiaceae (CTG-Ser) clade. PLoS ONE, 13 (6). e0198957. ISSN 1932-6203

    O'Brien, Matt and Grogan, Helen and Kavanagh, Kevin (2014) Proteomic response of Trichoderma aggressivum f. europaeum to Agaricus bisporus tissue and mushroom compost. Fungal Biology, 118 (9-10). pp. 785-791. ISSN 1878-6146

    O'Brien, Matthew (2012) Molecular and Epidemiological Studies of Trichoderma aggressivum f. europaeum. PhD thesis, National University of Ireland Maynooth.

    O'Brien, Matthew and Kavanagh, Kevin and Grogan, Helen (2017) Detection of Trichoderma aggressivum in bulk phase III substrate and the effect of T. aggressivum inoculum, supplementation and substrate-mixing on Agaricus bisporus yields. European Journal of Plant Pathology, 147 (1). pp. 199-209. ISSN 1573-8469

    O'Callaghan, Kathryn M. and Zenner, Annemie N.R.L. and Hartley, Cathryn J. and Griffin, Christine (2014) Interference competition in entomopathogenic nematodes: male Steinernema kill members of their own and other species. International Journal for Parasitology, 44 (13). pp. 1009-1017. ISSN 0020-7519

    O'Connell, Mary J. and McInerney, James O. (2005) Adaptive evolution of the human fatty acid synthase gene: Support for the cancer selection and fat utilization hypotheses? Gene, 360 (2). pp. 151-159.

    O'Connell, Kathleen and Doran, Philip and Gannon, Joan and Ohlendieck, Kay (2008) Lectin-based proteomic profiling of aged skeletal muscle: Decreased pyruvate kinase isozyme M1 exhibits drastically increased levels of N-glycosylation. European Journal of Cell Biology, 87 (10). pp. 793-805. ISSN 0171-9335

    O'Connell, Kathleen and Gannon, Joan and Doran, Philip and Ohlendieck, Kay (2007) Proteomic profiling reveals a severely perturbed protein expression pattern in aged skeletal muscle. International Journal of Molecular Medicine, 20 (2). pp. 145-153. ISSN 1107-3756

    O'Connell, Kathleen and Gannon, Joan and Doran, Philip and Ohlendieck, Kay (2008) Reduced expression of sarcalumenin and related Ca2+-regulatory proteins in aged rat skeletal muscle. Experimental Gerontology, 43 (10). pp. 958-961. ISSN 0531-5565

    O'Connell, Kathleen and Ohlendieck, Kay (2009) Proteomic DIGE analysis of the mitochondria-enriched fraction from aged rat skeletal muscle. Proteomics, 9 (24). pp. 5509-5524. ISSN 1615-9853

    O'Connell, Kathleen and Prencipe, Maria and O'Neill, Amanda and Corcoran, Claire and Rani, Sweta and Henry, Michael and Dowling, Paul and Meleady, Paula and O'Driscoll, Lorraine and Watson, William and O'Connor, Robert (2012) The use of LC-MS to identify differentially expressed proteins in docetaxel-resistant prostate cancer cell lines. Proteomics, 12 (13). pp. 2115-2126. ISSN 1615-9853

    O'Dea, Shirley and Annibaldi, Valeria and Gallagher, Louise and Mulholland, Joanne and Molloy, Emer L. and Breen, Conor and Gilbert, Jennifer L. and Martin, Darren S. and Maguire, Michael and Curry, Fitz-Roy (2017) Vector-free intracellular delivery by reversible permeabilization. PLoS ONE, 12 (3). e0174779. ISSN 1932-6203

    O'Gorman, Mary T. and Jatoi, Noor A. and Lane, Stephen J. and Mahon, Bernard P. (2005) IL-1b and TNF-a induce increased expression of CCL28 by airway epithelial cells via an NFjB-dependent pathway. Cellular Immunology, 238. pp. 87-96.

    O'Halloran, Damien M. and Fitzpatrick, David A. and McCormack, Grace P. and McInerney, James O. and Burnell, Ann (2006) The molecular phylogeny of a nematode-specific clade of heterotrimeric G-protein alpha-subunit genes. Journal of Molecular Evolution, 63 (1). pp. 87-94. ISSN 0022-2844

    O'Hanlon, Karen (2010) A functional genomics approach: Characterisation of two Non-ribosomal peptide synthetase genes, and investigation of an adaptive response towards alkylating DNA damage in Aspergillus fumigatus. PhD thesis, National University of Ireland Maynooth.

    O'Hanlon, Karen and Cairns, Timothy and Stack, Deirdre and Schrettl, Markus and Bignell, Elaine and Kavanagh, Kevin and Miggin, Sinead and O'Keeffe, Grainne and Larsen, Thomas and Doyle, Sean (2011) Targeted Disruption of Nonribosomal Peptide Synthetase pes3 Augments the Virulence of Aspergillus fumigatus. Infection and Immunity, 79 (10). pp. 3978-3992. ISSN 0019-9567

    O'Hanlon, Karen and Gallagher, Lorna and Schrettl, Markus and Jöchl, Christoph and Kavanagh, Kevin and Larsen, Thomas O. and Doyle, Sean (2012) Nonribosomal Peptide Synthetase Genes pesL and pes1 Are Essential for Fumigaclavine C Production in Aspergillus fumigatus. Applied and Environmental Microbiology , 78 (10). pp. 3166-3176. ISSN 0099-2240

    O'Hanlon, Karen and Margison, Geoffrey P. and Hatch, Amy and Fitzpatrick, David A. and Owens, Rebecca A. and Doyle, Sean and Jones, Gary W. (2012) Molecular characterization of an adaptive response to alkylating agents in the opportunistic pathogen Aspergillus fumigatus. Nucleic Acids Research, 40 (16). pp. 7806-7820. ISSN 0305-1048

    O'Keefe, S.M. and Beynon, A.L. and Davies, J.S. and Moynagh, Paul N. and Coogan, Andrew (2017) NF‐κB signalling is involved in immune‐modulation, but not basal functioning, of the mouse suprachiasmatic circadian clock. European Journal of Neuroscience, 45 (8). pp. 1111-1123. ISSN 1460-9568

    O'Keeffe, Joan and Doherty, Derek G. and Kenna, Tony and Sheahan, Kieran and O'Donoghue, Diarmuid and Hyland, John M. and O'Farrelly, Cliona (2004) Diverse populations of T cells with NK cell receptors accumulate in the human intestine in health and in colorectal cancer. European Journal of Immunology, 34. pp. 2110-2119.

    O'Keeffe, Joseph and Doyle, Sean and Kavanagh, Kevin (2003) Exposure of the yeast Candida albicans to the anti-neoplastic agent adriamycin increases the tolerance to amphotericin B. Journal of Pharmacy and Pharmacology, 55 (12). pp. 1629-1633.

    O'Keeffe, Grainne (2011) Functional Characterisation of the Eukaryotic Translation Elongation Factor 1Bγ in Aspergillus fumigatus; A Proteomic Systems Approach. PhD thesis, National University of Ireland Maynooth.

    O'Keeffe, Grainne and Jöchl, Christoph and Kavanagh, Kevin and Doyle, Sean (2013) Extensive proteomic remodeling is induced by eukaryotic translation elongation factor 1Bc deletion in Aspergillus fumigatus. Protein Science, 22 (11). pp. 1612-1622. ISSN 0961-8368

    O'Leary, Sean A. and Stack, Colin M. and Chubb, Michelle A. and Burnell, Ann (1998) The effect of day of emergence from the insect cadaver on the behaviour and environmental tolerances of infective juveniles of the entomopathogenic nematode Heterorhabditis Megidis (Strain UK211). Journal of Parasitology, 84 (4). pp. 665-672.

    O'Loughlin, Aran (2011) Examination of the effect of weaning stress on the physiological and molecular regulation of immune function in circulating bovine leukocytes. PhD thesis, National University of Ireland Maynooth.

    O'Loughlin, Aran and McGee, Mark and Waters, Sinead M. and Doyle, Sean and Earley, Bernadette (2011) Examination of the bovine leukocyte environment using immunogenetic biomarkers to assess immunocompetence following exposure to weaning stress. BMC Veterinary Research, 7 (45). ISSN 1746-6148

    O'Loughlin, Aran and McGee, Mark and Doyle, Sean and Earley, Bernadette (2014) Biomarker responses to weaning stress in beef calves. Research in Veterinary Science, 97 (2). pp. 457-463. ISSN 0034-5288

    O'Mahony Zamora, Georgina (2013) De novo sequencing, assembly and analysis of the genome and transcriptome of the nematode Panagrolaimus superbus. PhD thesis, National University of Ireland Maynooth.

    O'Neill, Carmel and Horvath, Gabor V. and Horvath, Eva and Dix, Philip and Medgyesy, Peter (1993) Chloroplast transformation in plants: polyethylene glycol (PEG) treatment of protoplasts is an alternative to biolistic delivery systems. The Plant Journal, 3 (5). pp. 729-738. ISSN 0960-7412

    O'Reilly, Niamh (2012) An Investigation of the Role of Bacillus oleronius in the Pathogenesis of Rosacea. PhD thesis, National University of Ireland Maynooth.

    O'Reilly, Niamh and Gallagher, Clair and Reddy Katikireddy, Kishore and Clynes, Martin and O'Sullivan, Finbarr and Kavanagh, Kevin (2012) Demodex-Associated Bacillus Proteins Induce an Aberrant Wound Healing Response in a Corneal Epithelial Cell Line: Possible Implications for Corneal Ulcer Formation in Ocular Rosacea. Investigative Ophthalmology & Visual Science, 53. pp. 3250-3259. ISSN 0146-0404

    O'Reilly, Clare and Pette, Dirk and Ohlendieck, Kay (2003) Increased expression of the nicotinic acetylcholine receptor in stimulated muscle. Biochemical and Biophysical Research Communications, 300 (2). pp. 585-591. ISSN 0006-291X

    O'Reilly, N. and Bergin, D. and Reeves, E.P. and McElvaney, N.G. and Kavanagh, Kevin (2012) Demodex-associated bacterial proteins induce neutrophil activation. British Journal of Dermatology, 166 (4). pp. 753-760. ISSN 0007-0963

    O'Reilly, N. and Menezes, N. and Kavanagh, Kevin (2012) Positive correlation between serum immunoreactivity to Demodex-associated Bacillus proteins and erythematotelangiectatic rosacea. British Journal of Dermatology, 167 (5). pp. 1032-1036. ISSN 0007-0963

    O'Reilly, Susan M. and Moynagh, Paul N. (2003) Regulation of Toll-like receptor 4 signalling by A20 zinc finger protein. Biochemical and Biophysical Research Communications, 303 (2). pp. 586-593. ISSN 0006-291X

    O'Shaughnessy, Luke and Carr, Michael and Crowley, Brendan and Carberry, Stephen and Doyle, Sean (2011) Recombinant expression and immunological characterisation of proteins derived from human metapneumovirus. Journal of Clinical Virology, 52 (3). pp. 236-243. ISSN 1386-6532

    O'Shea, D. and Corrigan, M. and Dunne, M.R. and Jackson, R. and Woods, C. and Gaoatswe, G. and Moynagh, Paul N. and O'Connell, J. and Hogan, Andrew (2013) Changes in human dendritic cell number and function in severe obesity may contribute to increased susceptibility to viral infection. International Journal of Obesity, 37 (11). pp. 1510-1513. ISSN 0307-0565

    O'Sullivan, Dermot and Dowling, Paul and Joyce, Helena and McAuley, Edel and McCann, Andrew and Henry, Michael and McGovern, Brianan and Barham, Paul and Kelleher, Fergal C. and Murphy, Jean and Kennedy, Susan and Swan, Niall and Moriarty, Michael and Clynes, Martin and Larkin, Annemarie (2017) A novel inhibitory anti-invasive MAb isolated using phenotypic screening highlights AnxA6 as a functionally relevant target protein in pancreatic cancer. British Journal of Cancer, 117 (9). pp. 1326-1335. ISSN 1532-1827

    O'Sullivan, Dermot and Henry, Michael and Joyce, Helena and Walsh, Naomi and Mc Auley, Edel and Dowling, Paul and Swan, Niall and Moriarty, Michael and Barnham, Paul and Clynes, Martin and Larkin, Annemarie (2014) 7B7: a novel antibody directed against the Ku70/Ku80 heterodimer blocks invasion in pancreatic and lung cancer cells. Tumor Biology, 35 (7). pp. 6983-6997. ISSN 1010-4283

    O'Sullivan, Niamh C. and McGettigan, Paul A. and Sheridan, Graham K. and Pickering, Mark and Conboy, Lisa and O'Connor, John J. and Moynagh, Paul N. and Higgins, Desmond G. and Regan, Ciaran M. and Murphy, Keith J. (2007) Temporal change in gene expression in the rat dentate gyrus following passive avoidance learning. Journal of Neurochemistry, 101 (4). pp. 1085-1098. ISSN 0022-3042

    Ohlendieck, Kay (2011) Skeletal muscle proteomics: current approaches, technical challenges and emerging techniques. Skeletal Muscle, 1 (6). pp. 1-15.

    Ohlendieck, Kay and Harmon, Shona and Koll, Michael and Paice, Alistair G. and Preedy, Victor R. (2003) Ca2+-Regulatory Muscle Proteins in the Alcohol-Fed Rat. Metabolism, 52 (9). pp. 1102-1112. ISSN 0026-0495

    Ohlendieck, Kay and Swandulla, Dieter (2017) Molekulare Pathogenese der Fibrose bei Muskeldystrophie vom Typ Duchenne - Molecular pathogenesis of Duchenne muscular dystrophy-related fibrosis. Der Pathologe, 38 (1). pp. 21-29. ISSN 0172-8113

    Owens, Rebecca A. (2012) A Global and Targeted Proteomic Investigation of Aspergillus fumigatus. PhD thesis, National University of Ireland Maynooth.

    Owens, Rebecca A. and Hammel, Stephen and Sheridan, Kevin J. and Jones, Gary W. and Doyle, Sean (2014) A Proteomic Approach to Investigating Gene Cluster Expression and Secondary Metabolite Functionality in Aspergillus fumigatus. PLoS ONE, 9 (9). e106942. ISSN 1932-6203

    Owens, Rebecca A. and O'Keeffe, Grainne and Smith, Elizabeth B. and Dolan, Stephen K. and Hammel, Stephen and Sheridan, Kevin J. and Fitzpatrick, David A. and Keane, Thomas M. and Doyle, Sean (2015) Interplay between Gliotoxin Resistance, Secretion, and the Methyl/ Methionine Cycle in Aspergillus fumigatus. Eukaryotic Cell, 14 (9). pp. 941-957. ISSN 1535-9786

    O’Loughlin, Aran and Lynn, David J. and McGee, Mark and Doyle, Sean and McCabe, Matthew and Earley, Bernadette (2012) Transcriptomic analysis of the stress response to weaning at housing in bovine leukocytes using RNA-seq technology. BMC Genomics, 13 (250). pp. 1-18. ISSN 1471-2164

    O’Keeffe, Grainne and Hammel, Stephen and Owens, Rebecca A. and Keane, Thomas M. and Fitzpatrick, David A. and Jones, Gary W. and Doyle, Sean (2014) RNA-seq reveals the pan-transcriptomic impact of attenuating the gliotoxin self-protection mechanism in Aspergillus fumigatus. BMC Genomics, 15 (894). pp. 1-26. ISSN 1471-2164

    P

    Pamjav, Horolma and Triga, Dimitra and Busaz, Zsuzsanna and Vellai, Tibor and Lucskai, Attila and Adams, Byron and Reid, Alexander P. and Burnell, Ann and Griffin, Christine and Glazer, Itamar and Klein, Michael G. and Fodor, Andras (1999) Novel application of PhastSystem polyacrylamide gel electrophoresis using restriction fragment length polymorphism--internal transcribed spacer patterns of individuals for molecular identification of entomopathogenic nematodes. Electrophoresis, 20 (6). pp. 1266-1273. ISSN 0173-0835

    Pan, Zihua and Nie, Wenjing and Miggin, Sinead and Qiu, Fuman and Cao, Yi and Chen, Jinbin and Yang, Binyao and Zhou, Yifeng and Lu, Jiachun and Yang, Lei (2018) Long non‐coding RNA AGER‐1 functionally upregulates the innate immunity gene AGER and approximates its anti‐tumor effect in lung cancer. Molecular Carcinogenesis, 57 (3). pp. 305-318. ISSN 0899-1987

    Park, Hee-Soo and Bayram, Ozgur and Braus, Gerhard H. and Kim, Sun Chang and Yu, Jae-Hyuk (2012) Characterization of the velvet regulators in Aspergillus fumigatus. Molecular Microbiology, 86 (4). pp. 937-953. ISSN 0950-382X

    Parker, Rell L. and O'Neill, Heidi and Henley, Beverley and Wageman, Charles R. and Drenan, Ryan M. and Marks, Michael J. and Miwa, Julie M. and Grady, Sharon R. and Lester, Henry A. (2017) Deletion of lynx1 reduces the function of α6* nicotinic receptors. PLoS ONE, 12 (12). e0188715. ISSN 1932-6203

    Parkinson, M. and Cotter, T. and Dix, Philip (1989) Growth and peroxidase production in cultures of horseradish (Armoraciu mticunu). Biochemical Society Transactions, 17. pp. 606-607. ISSN 0300-5127

    Parkinson, M. and Cotter, T. and Dix, Philip (1990) Peroxidase production by cell suspension and hairy root cultures of horseradish (Armoracia rusticana). Plant Science, 66 (2). pp. 271-277. ISSN 0168-9452

    Parnell, J.A.N. and Pilla, Francesca and Simpson, D.A. and van Welzen, P.C. and Chayamarit, K. and Chantaranothai, P. and Boyce, P.C. and Bygrave, P. and Byrne, C. and Chen, S. and Couch, C. and Curtis, T. and Dransfield, S. and Duyfjes, B.E.E. and Eianthong, W. and Esser, H.J. and Grote, P.J. and Hua, Z. and Jebb, M.H.P. and Kirkup, D.W. and Ke Loc, P. and Larsen, S.S. and Macklin, J. and Madern, A. and Meade, Conor and Merklinger, F. and Middleton, D.J. and Moat, J. and Muasya, A.M. and Nakmuenwai, P. and Pederson, H. and Pendry, C.A. and Prajaksood, A. and Pooma, R. and Preusapan, K. and Puglisi, C. and Sathapattayanon, A. and Sukkharak, P. and Staples, G. and Strijk, J. and Suddee, S. and Sungkaew, S. and Tangjitman, K. and Teerwatananon, A. and Tovaranonte, J. and Ung, T. and Trias Blasi, A. and de Wilde, W.J.J.O. and Wilkin, P. and Yahara, T. (2015) A re-examination of the life and work of A.F.G. Kerr and of his colleagues and friends. Thai Forest Bulletin (Botany), 43. pp. 111-131. ISSN 0495-3843

    Parnell, J.A.N. and Simpson, D.A. and Moat, J. and Kirkup, D.W. and Chantaranothai, P. and Boyce, P.C. and Bygrave, P. and Dransfield, S. and Jebb, M.H.P. and Macklin, J. and Meade, Conor and Middleton, D.J. and Muasya, A.M. and Prajaksood, A. and Pendry, C.A. and Pooma, R. and Suddee, S. and Wilkin, P. (2003) Plant collecting spread and densities: their potential impact on biogeographical studies in Thailand. Journal of Biogeography, 30 (2). pp. 193-209. ISSN 0305-0270

    Pearlmutter, Barak A. and Conor J. Houghton, Conor J. (2009) A New Hypothesis for Sleep: Tuning for Criticality. Neural Computation, 21 (6). pp. 1622-1641. ISSN 1530-888X

    Pellegrineschi, A. and Kist, M. and Dix, Ilona and Kavanagh, T.A. and Dix, Philip (1995) Expression of horseradish peroxidase in transgenic tobacco. Biochemical Society Transactions, 23 (2). pp. 247-250. ISSN 0300-5127

    Petti, Carloalberto and Meade, Conor and Downes, Martin and Mullins, Ewen (2007) Facilitating co-existence by tracking gene dispersal in conventional potato systems with microsatellite markers. Environmental Biosafety Research, 6 (4). pp. 223-235. ISSN 1635-7922

    Petti, Carloalberto and Wendt, Toni and Meade, Conor and Mullins, Ewen (2009) Evidence of genotype dependency within Agrobacterium tumefaciens in relation to the integration of vector backbone sequence in transgenic Phytophthora infestans-tolerant potato. Journal of Bioscience and Bioengineering, 107 (3). pp. 301-306. ISSN 1389-1723

    Phelan, S. and Fitzgerald, T. and Grant, J. and Byrne, S. and Meade, Conor and Mullins, Ewen (2015) Propensity for seed-mediated gene flow from potato crops and potential consequences for the coexistence of GM and non-GM potato systems. European Journal of Agronomy, 67. pp. 52-60. ISSN 1161-0301

    Philip, Gayle K. and Creevey, Christopher J. and McInerney, James O. (2005) The Opisthokonta and the Ecdysozoa May Not Be Clades: Stronger Support for the Grouping of Plant and Animal than for Animal and Fungi and Stronger Support for the Coelomata than Ecdysozoa. Molecular Biology and Evolution, 22. pp. 1175-1184.

    Piasecka, Justyna (2010) Molecular and Microbiological Methods for the Detection and Measurement of Dry Bubble Disease caused by Lecanicillium (Verticillium) fungicola on Mushroom Farms. PhD thesis, National University of Ireland Maynooth.

    Piatkov, Konstantin and Graciet, Emmanuelle and Varshavsky, Alexander (2013) Ubiquitin Reference Technique and Its Use in Ubiquitin-Lacking Prokaryotes. PLoS ONE, 8 (6). e67952. ISSN 1932-6203

    Pisani, Davide and Mohun, Samantha and Harris, Simon and McInerney, James and Wilkinson, Mark (2006) Molecular evidence for dim-light vision in the last common ancestor of the vertebrates. Current Biology, 16 (9). pp. 318-319.

    Poage, Miranda and Le Martret, Benedicte and Jansen, Marcel A.K. and Nugent, Gregory and Dix, Philip (2011) Modification of reactive oxygen species scavenging capacity of chloroplasts through plastid transformation. Plant Molecular Biology, 76 (3). pp. 371-384. ISSN 0167-4412

    Poage, Miranda and Le Martret, Benedicte and Jansen, Marcel A.K. and Nugent, Gregory D. and Dix, Philip (2011) Modification of reactive oxygen species scavenging capacity of chloroplasts through plastid transformation. Plant Molecular Biology, 76. pp. 371-384.

    Popowska, Magdalena and Rzeczycka, Marzenna and Miernik, Antoni and Krawczyk-Balska, Agata and Walsh, Fiona and Duffy, Brion (2012) Influence of Soil Use on Prevalence of Tetracycline, Streptomycin, and Erythromycin Resistance and Associated Resistance Genes. Antimicrobial Agents and Chemotherapy, 56 (3). pp. 1434-1443. ISSN 0066-4804

    Purcell, James (2011) Strategies to Target the Bone Morphogenetic Protein Signalling Pathway in Lung Disease. PhD thesis, National University of Ireland Maynooth.

    Purnhauser, L.i. and Medgyesy, Peter and Czakó, M. and Dix, Philip and Márton, L. (1987) Stimulation of shoot regeneration in Triticum aestivum and Nicotiana plumbaginifolia Viv. tissue cultures using the ethylene inhibitor AgNO3. Plant Cell Reports, 6. pp. 1-4. ISSN 0721-7714

    Pärnänen, Katariina M. M. and Narciso-da-Rocha, Carlos and Kneis, David and Berendonk, Thomas U. and Cacace, Damlano and Do, Thi Thuy and Elpers, Christian and Fatta-Kassinos, Despo and Henriques, Isabel and Jaeger, Thomas and Karkman, Antti and Martinez, Jose Luis and Michael, Stella G. and Michael-Kordatou, Irene and O’Sullivan, Kristin and Rodriguez-Mozaz, Sara and Schwartz, Thomas and Sheng, Hongjie and Sørum, Henning and Stedtfeld, Robert D. and Tiedje, James M. and Varela Della Giustina, Saulo and Walsh, Fiona and Vaz-Moreira, Ivone and Virta, Marko and Manaia, Célia M. (2019) Antibiotic resistance in European wastewater treatment plants mirrors the pattern of clinical antibiotic resistance prevalence. Science Advances, 5 (3). ISSN 2375-2548

    Q

    Quinn, Ciaran (2013) Integrating Project Orientated Problem Based Learning (POPBL) and Information Literacy Instruction. In: NUI Maynooth Teaching and Learning Showcase 2012/13, 8th May, 2013, NUI Maynooth. (Unpublished)

    R

    Raab, Ulla and Beckenlehner, Karin and Lowin, Tosten and Niller, Hans-Helmut and Doyle, Sean and Modrow, Susanne (2002) NS1 Protein of Parvovirus B19 Interacts Directly with DNA Sequences of the p6 Promoter and with the Cellular Transcription Factors Sp1/Sp3. Virology, 293 (1). pp. 86-93. ISSN 0042-6822

    Rahman, Farzana and Hassan, Mehedi and Hanano, Abdulsamie and Fitzpatrick, David A. and McCarthy, Charley G.P. and Murphy, Denis (2018) Evolutionary, structural and functional analysis of the caleosin/peroxygenase gene family in the Fungi. BMC Genomics, 19 (976). ISSN 1471-2164

    Rajpal, Rajesh and Dowling, Paul and Meiller, Justine and Clarke, Colin and Murphy, William G. and O'Connor, Robert and Kell, Malcolm and Mitsiades, Constantine and Richardson, Paul and Anderson, Kenneth C. and Clynes, Martin and O'Gorman, Peter (2011) A novel panel of protein biomarkers for predicting response to thalidomide-based therapy in newly diagnosed multiple myeloma patients. Proteomics, 11 (8). pp. 1391-1402. ISSN 1615-9853

    Rao, Sohail A.K. and Carolan, James C. and Wilkinson, Thomas L. (2013) Proteomic Profiling of Cereal Aphid Saliva Reveals Both Ubiquitous and Adaptive Secreted Proteins. PLoS ONE, 8 (2). e57413. ISSN 1932-6203

    Rao, Sohail Ahmad Khan and Carolan, James C. and Wilkinson, Thomas L. (2016) Proteomic Insights into the Hidden World of Phloem Sap Feeding. In: Management of Insect Pests to Agriculture. Springer International Publishing, pp. 49-61. ISBN 978-3-319-24047-3

    Raverdeau, Mathilde and Breen, Conor and Misiak, Alicja and Mills, Kingston H.G. (2016) Retinoic acid suppresses IL-17 production and pathogenic activity of γδ T cells in CNS autoimmunity. Immunology and Cell Biology, 94 (8). pp. 763-773. ISSN 1440-1711

    Reading, James and Vaes, Bart and Hull, Caroline and Sabbah, Shereen and Hayday, Thomas and Wang, Nancy S. and DiPiero, Anthony and Lehman, Nocolas A. and Taggart, Jen M. and Carty, Fiona and English, Karen and Pinxteren, Jef and Deans, Robert and Ting, Anthony E. and Tree, Timothy (2015) Suppression of IL-7-dependent Effector T-cell Expansion by Multipotent Adult Progenitor Cells and PGE2. Molecular Therapy, 23 (11). pp. 1783-1793. ISSN 1525-0016

    Reardon, Wesley and Chakrabortee, Sohini and Pereira, Tiago Campos and Tyson, Trevor and Banton, Matthew C. and Dolan, Katharine M. and Culleton, Bridget A. and Wise, Michael J. and Burnell, Ann and Tunnacliffe, Alan (2010) Expression profiling and cross-species RNA interference (RNAi) of desiccation-induced transcripts in the anhydrobiotic nematode Aphelenchus avenae. BMC Molecular Biology, 11 (6). ISSN 1471-2199

    Reardon, Wesley and Fitzpatrick, David A. and Fares, Mario A. and Nugent, Jacqueline M. (2009) Evolution of flower shape in Plantago lanceolata. Plant Molecular Biology, 71 (3). pp. 241-250. ISSN 0167-4412

    Reardon, Wesley and Gallagher, Pauline and Nolan, Katie M. and Wright, Hayley and Carde-nosa-Rubio, Maria Cruz and Bragalini, Claudia and Lee, Chui-Sang and Fitzpatrick, David A. and Corcoran, Killian and Wolff, Kirsten and Nugent, Jacqueline M. (2014) Different outcomes for the MYB floral symmetry genes DIVARICATA and RADIALIS during the evolution of derived actinomorphy in Plantago. New Phytologist, 202 (2). pp. 716-725. ISSN 0028-646X

    Reddy, Andrew and Sangenito, Leandro Stefano and Guedes, Arthur de Azevedo and Branguinha, Marta Helena and Kavanagh, Kevin and McGinley, John and Souza dos Santos, André Luis and Velasco-Torrijos, Trinidad (2017) Glycosylated metal chelators as anti-parasitic agents with tunable selectivity. Dalton Transactions, 46 (16). p. 5297. ISSN 1477-9226

    Reece, Emma and Doyle, Sean and Greally, Peter and Renwick, Julie and McClean, Siobhan (2018) Aspergillus fumigatus Inhibits Pseudomonas aeruginosa in Co-culture: Implications of a Mutually Antagonistic Relationship on Virulence and Inflammation in the CF Airway. Frontiers in Microbiology, 9 (1205). ISSN 1664-302X

    Rees, Gareth W. and Trull, Andrew K. and Doyle, Sean (1995) Evaluation of an Enzyme-Immunometric Assay for Serum α-Glutathione S-Transferase. Annals of Clinical Biochemistry: International Journal of Laboratory Medicine, 32 (6). pp. 575-583. ISSN 1758-1001

    Reeves, Emer and Nagl, Markus and O'Keeffe, Joseph and Kelly, Judy and Kavanagh, Kevin (2006) Effect of N-chorotaurine on Aspergillus, with particular reference to destruction of secreted gliotoxin. Journal of Medical Microbiology, 55. pp. 913-918.

    Reeves, Emer P. and Murphy, Thomas and Daly, Paul and Kavanagh, Kevin (2004) Amphotericin B enhances the synthesis and release of the immunosuppressive agent gliotoxin from the pulmonary pathogen Aspergillus fumigatus. Journal of Medical Microbiology, 53. pp. 1-7.

    Reeves, Emer P. and Reiber, Kathrin and Neville, Claire and Scheibner, Olaf and Kavanagh, Kevin and Doyle, Sean (2006) A nonribosomal peptide synthetase (Pes1) confers protection against oxidative stress in Aspergillus fumigatus. The FEBS Journal, 273 (13). pp. 3038-3053. ISSN 1742-464X

    Reeves, Emer P. and Kavanagh, Kevin and Whittaker, Peter A. (1992) Multiple transformation of Saccharomyces cerevisiae by protoplast fusion. FEMS Microbiology Letters, 99 (2-3). pp. 193-197. ISSN 0378-1097

    Reeves, Emer P. and Messina, C.G.M. and Doyle, Sean and Kavanagh, Kevin (2004) Correlation between gliotoxin production and virulence of Aspergillus fumigatus in Galleria mellonella. Mycopathologia, 158 (1). pp. 73-79. ISSN 0301-486X

    Regeai, S.O. and Dolan, K.M. and Fitzpatrick, David A. and Browne, J.A. and Jones, J.T. and Burnell, Ann (2009) Novel primers for the amplification of nuclear DNA introns in the entomopathogenic nematode Heterorhabditis bacteriophora and their cross-amplification in seven other Heterorhabditis species. Molecular Ecology Resources, 9 (1). pp. 421-424. ISSN 1755-098X

    Reiber, Kathrin and Reeves, Emer P. and Neville, Claire M. and Winkler, Robert and Gebhardt, Peter and Kavanagh, Kevin and Doyle, Sean (2005) The expression of selected non-ribosomal peptide synthetases in Aspergillus fumigatus is controlled by the availability of free iron. FEMS Microbiology Letters, 248 (1). pp. 83-91. ISSN 0378-1097

    Renwick, Julie and Daly, Paul and Reeves, Emer and Kavanagh, Kevin (2006) Susceptibility of Larvae of Galleria mellonella to Infection by Asperillus fumigatus is Dependent upon Stage of Conidial Germination. Mycopathologia, 161. pp. 377-384.

    Renwick, Julie and Reeves, Emer P. and Wientjes, Frans B. and Kavanagh, Kevin (2006) Translocation of proteins homologous to human neutrophil p47phox and p67phox to the cell membrane in activated hemocytes of Galleria mellonella. Developmental and Comparative Immunology.

    Ribeiro, Liliane F.C. and Chelius, Cynthia and Boppidi, Karthik R. and Naik, Nisha S. and Hossain, Simin and Ramsay, Jessica J.J. and Kumar, Jyothi and Ribeiro, Lucas F. and Ostermeier, Marc and Tran, Bao and Goo, Young Ah and de Assis, Leandro José and Ulas, Mevlut and Bayram, Ozgur and Goldman, Gustavo H. and Lincoln, Stephen and Srivastava, Ranjan and Harris, Steven D. and Marten, Mark R. (2019) Comprehensive Analysis of Aspergillus nidulans PKA Phosphorylome Identifies a Novel Mode of CreA Regulation. mBio, 10 (2). e02825-18. ISSN 2150-7511

    Ries, Laure Nocolas Annick and de Assis, Leandro José and Rodrigues, Fernando José Santos and Caldana, Camila and Rocha, Maria Campos and Malavazi, Iran and Bayram, Ozgur and Goldman, Gustavo H. (2018) The Aspergillus nidulans pyruvate dehydrogenase kinases are essential to integrate carbon source metabolism. G3, 8 (7). pp. 2445-2463. ISSN 2160-1836

    Roche, C. and Boo, T.W. and Walsh, Fiona and Crowley, B. (2008) Detection and molecular characterisation of plasmidic AmpC b-lactamases in Klebsiella pneumoniae isolates from a tertiary-care hospital in Dublin, Ireland. Clinical Microbiology and Infection, 14 (6). pp. 616-618. ISSN 1198-743X

    Rolston, A.N. and Griffin, Christine and Downes, Martin (2006) Emergence and Dispersal Patterns of Two Isolates of the Entomopathogenic Nematode Steinernema feltiae. Journal of Nematology, 32 (2). pp. 221-228. ISSN 0022-300X

    Rolston, Alec and Meade, Conor and Boyle, Stephen and Kakouli-Duarte, Thomae and Downes, Martin (2009) Intraspecific variation among isolates of the entomopathogenic nematode Steinernema feltiae from Bull Island, Ireland. Nematology, 11 (3). pp. 439-451. ISSN 1388-5545

    Rolston, Alec N. and Griffin, Christine and Downes, Martin (2005) Distribution of entomopathogenic nematodes in an Irish sand dune system. Nematology, 7 (2). pp. 259-266.

    Rowan, Raymond and McCann, Malachy and Kavanagh, Kevin (2010) Analysis of the response of Candida albicans cells to Silver(I). Medical Mycology, 48 (3). pp. 498-505. ISSN 1460-2709

    Rowan, Raymond and Moran, Ciara and McCann, Malachy and Kavanagh, Kevin (2009) Use of Galleria mellonella larvae to evaluate the in vivo anti-fungal activity of [Ag2(mal)(phen)3]. Biometals, 22 (3). pp. 461-467. ISSN 0966-0844

    Rowan, Raymond and Tallon, Theresa M. and Sheahan, Anita and Curran, Robert and McCann, Malachy and Kavanagh, Kevin and Devereux, Michael and McKee, Vickie (2006) 'Silver bullets' in antimicrobial chemotherapy: Synthesis, characterisation and biological screening of some new Ag(I)-containing imidazole complexes. Polyhedron, 25. pp. 1771-1778. ISSN 0277-5387

    Ryan, J.M. and Barry, F. and Murphy, J.M. and Mahon, Bernard P. (2007) Interferon-y does not break, but promotes the immunosuppressive capacity of adult human mesenchymal stem cells. Clinical and Experimental Immunology, 149. pp. 353-363.

    Ryan, Jennifer M. and Barry, Frank P. and Murphy, J. Mary and Mahon, Bernard P. (2005) Mesenchymal stem cells avoid allogeneic rejection. Journal of Inflammation, 2 (1).

    Ryan, Eimear M. and Mullins, Ewen and Burke, James and Downes, Martin and Meade, Conor (2006) Tracing field hybridization in Ryegrass species using microsatellite and morphological markers. Environmental Biosafety Research, 5 (2). pp. 111-117. ISSN 1635-7922

    Ryan, Mark and McCarthy, Leone and Rappuoli, Rino and Mahon, Bernard P. and Mills, Kingston H.G. (1998) Pertussis toxin potentiates Th1 and Th2 responses to co-injected antigen: adjuvant action is associated with enhanced regulatory cytokine production and expression of the co-stimulatory molecules B7-1, B7-2 and CD28. International Immunology, 10 (4). pp. 651-662. ISSN 0953-8178

    Ryan, Patrick T. and Ó'Maoiléidigh, Diarmuid S. and Drost, Hajk-Georg and Kwasniewska, Kamila and Gabel, Alexander and Grosse, Ivo and Graciet, Emmanuelle and Quint, Marcel and Wellmer, Frank (2015) Patterns of gene expression during Arabidopsis flower development from the time of initiation to maturation. BMC Genomics, 16 (488). ISSN 1471-2164

    Ryder, J.J. and Griffin, Christine (2002) Density-dependent fecundity and infective juvenile production in the entomopathogenic nematode, Heterorhabditis megidis. Parasitology, 125. pp. 83-92. ISSN 0031-1820

    Ryder, J.J. and Griffin, Christine (2003) Phased infectivity in Heterorhabditis megidis: the effects of infection density in the parental host and filial generation. International Journal for Parasitology, 33. pp. 1013-1018. ISSN 0020-7519

    Rüdiger, S. and Shuai, J.W. and Huisinga, W. and Nagaiah, Ch. and Warnecke, G. and Parker, I. and Falcke, M. (2007) Hybrid stochastic and deterministic simulations of calcium blips. Biophysical Journal, 93 (6). pp. 1847-1857. ISSN 0006-3495

    S

    Sadd, Ben M. and Barribeau, Seth M. and Bloch, Guy and de Graaf, Dirk C. and Dearden, Peter and Elsik, Christine G. and Gadau, Jürgen and Grimmelikhuijzen, Cornelis J.P. and Hasselmann, Martin and Lozier, Jeffrey D. and Robertson, Hugh M. and Smagghe, Guy and Stolle, Eckart and Van Vaerenbergh, Matthias and Waterhouse, Robert M. and Bornberg-Bauer, Erich and Klasberg, Steffen and Bennett, Anna K. and Câmara, Francisco and Guigó, Roderic and Hoff, Katharina and Mariotti, Marco and Munoz-Torres, Monica and Murphy, Terence and Santesmasses, Didac and Amdam, Gro V. and Beckers, Matthew and Beye, Martin and Biewer, Matthias and Bitondi, Márcia M.G. and Blaxter, Mark L. and Bourke, Andrew F.G. and Brown, Mark J.F. and Buechel, Severine D. and Cameron, Rossanah and Cappelle, Kaat and Carolan, James C. and Christiaens, Olivier and Ciborowski, Kate L. and Clarke, David F. and Colgan, Thomas J. and Collins, David H. and Cridge, Andrew G. and Dalmay, Tamas and Dreier, Stephanie and du Plessis, Louis and Duncan, Elizabeth and Erler, Silvio and Evans, Jay and Falcon, Tiago and Flores, Kevin and Freites, Flávia C.P. and Fuchikawa, Taro and Gempe, Tanja and Hartfelder, Klaus and Hauser, Frank and Helbing, Sophie and Humann, Fernanda C. and Irvine, Frano and Jermiin, Lars S. and Johnson, Claire E. and Johnson, Reed M. and Jones, Andrew K. and Kadowaki, Tatsuhiko and Kidner, Jonathan H. and Koch, Vasco and Köhler, Arian and Kraus, F. Bernhard and Lattorff, H. Michael and Leask, Megan and Lockett, Gabrielle A. and Mallon, Eamonn B. and Marco Antonio, David S. and Marxer, Monica and Meeus, Ivan and Moritz, Robin F.A. and Nair, Ajay and Näpflin, Kathrin and Nissen, Inga and Niu, Jinzhi and Nunes, Francis M.F. and Oakeshott, John G. and Osborne, Amy and Otte, Marianne and Pinheiro, Daniel and Rossié, Nina and Rueppell, Olav and Santos, Carolina G. and Schmid-Hempel, Regula and Schmitt, Björn D. and Scheulte, Christina and Simões, Zilá L.P. and Soares, Michelle P.M. and Swevers, Luc and Winnebeck, Eva C. and Wolschin, Florian and Yu, Na and Zdobnov, Evgeny M. and Aqrawi, Peshtewani K. and Blankenburg, Kerstin P. and Coyle, Marcus and Francisco, Liezl and Hernandez, Alvaro G. and Holder, Michael and Hudson, Matthew E. and Jackson, LaRonda and Jayaseelan, Joy and Joshi, Vandita and Kovar, Christie and Lee, Sandra L. and Mata, Robert and Mathew, Tittu and Newsham, Irene F. and Ngo, Robert and Okwuonu, Geoffrey and Pham, Christopher and Pu, Ling-Ling and Saada, Nehad and Santibanez, Jireh and Simmons, DeNard and Thornton, Rebecca and Venkat, Aarti and Walden, Kimberley K.O. and Wu, Yuan-Qing and Debyser, Griet and Devreese, Bart and Asher, Claire and Blommaert, Julie and Chipman, Ariel D. and Chittka, Lars and Fouks, Bertrand and Liu, Jisheng and O'Neill, Meaghan P. and Sumner, Seirian and Puiu, Daniela and Qu, Jiaxin and Salzberg, Steven L. and Scherer, Steven E. and Muzny, Donna M. and Richards, Stephen and Robinson, Gene E. and Gibbs, Richard A. and Schmid-Hempel, Paul and Worley, Kim C. (2015) The genomes of two key bumblebee species with primitive eusocial organization. Genome Biology, 16 (76). pp. 1-31. ISSN 1465-6906

    Saldanha, J. and Lelie, N. and Yu, M.W. and Heath, A. and Albrecht, J. and Buhr, S. and Roth, W. and Chaput, C. and Chudy, M. and Schmidt, I. and Cohen, B. and Defer, C. and Lefebvre, C. and Doyle, S. and Daly, P. and Echevarria, J. and Erdman, D. and Anderson, B. and Fang, R. and Johnstone, D. and Gierman, T. and Gross, P. and Held, I. and Jarvis, L. and Cleland, A. and Lazo, A. and Gibaja, V. and Murozuka, T. and Okada, Y. and Pedada, L. and Lou, A. and Pisani, G. and Gentili, A. and Stoltz, M. and Thomas, I. and Mathy, E. and Weimar, T. and Yu, M.-Y. and Shen, L.M. and Mason, B. and York, D. and Zhang, H. (2002) Establishment of the first World Health Organization International Standard for human parvovirus B19 DNA nucleic acid amplification techniques. Vox Sanguinis, 82 (1). pp. 24-31. ISSN 0042-9007

    Saleh, Aliabbas A. and Jones, Gary W. and Tinley, Frances C. and Delaney, Stephen F. and Alabaddi, Sahar H. and Fenlon, Keith and Doyle, Sean and Owens, Rebecca A. (2018) Systems impact of zinc chelation by the epipolythiodioxopiperazine dithiol gliotoxin in Aspergillus fumigatus: a new direction in natural product functionality. Metallomics, 10. pp. 854-866. ISSN 1756-591X

    Santos, Tania (2011) Optimisation of phytase production by Aspergillus niger using solid state fermentation. Masters thesis, National University of Ireland Maynooth.

    Sarikaya-Bayram, Ozlem and Bayram, Ozgur and Feussner, Kirstin and Kim, Jong-Hwa and Kim, Hee-Soo and Kaever, Alexander and Feussner, Ivo and Chae, Keon-Sang and Han, Dong-Min and Han, Kap-Hoon and Braus, Gerhard H. (2014) Membrane-Bound Methyltransferase Complex VapA-VipC-VapB Guides Epigenetic Control of Fungal Development. Developmental Cell, 29 (4). pp. 406-420. ISSN 1534-5807

    Sarikaya-Bayram, Ozlem and Palmer, Jonathan M. and Keller, Nancy and Braus, Gerhard H. and Bayram, Ozgur (2015) One Juliet and four Romeos: VeA and its methyltransferases. Frontiers in Microbiology, 6 (1). pp. 1-7. ISSN 1664-302X

    Schrettl, Markus and Carberry, Stephen and Kavanagh, Kevin and Haas, Hubertus and Jones, Gary W. and O'Brien, Jennifer and Nolan, Aine and Stephens, John C. and Fenelon, Orla and Doyle, Sean (2010) Self-Protection against Gliotoxin—A Component of the Gliotoxin Biosynthetic Cluster, GliT, Completely Protects Aspergillus fumigatus Against Exogenous Gliotoxin. PLOS Pathogens, 6 (6). ISSN 1553-7366

    Schroeder, Martina (2010) Human DEAD-box protein 3 has multiple functions in gene regulation and cell cycle control and is a prime target for viral manipulation. Biochemical Pharmacology, 79 (3). pp. 297-306. ISSN 0006-2952,

    Scriven, Jessica J. and Woodall, Lucy C. and Tinsley, Matthew C. and Knight, Mairi E. and Williams, Paul H. and Carolan, James C. and Brown, Mark J.F. and Goulson, Dave (2015) Revealing the hidden niches of cryptic bumblebees in Great Britain: Implications for conservation. Biological Conservation, 182. pp. 126-133. ISSN 0006-3207

    Serrano-Mislata, Antonio and Goslin, Kevin and Zheng, Beibei and Raeb, Liina and Wellmer, Frank and Graciet, Emmanuelle and Madueno, Francisco (2017) Regulatory interplay between LEAFY, APETALA1/CAULIFLOWER and TERMINAL FLOWER1: New insights into an old relationship. Plant Signaling and Behavior, 12 (10). e1370164. ISSN 1559-2324

    Shannon, Adam J. and Browne, John A. and Boyd, Jacqueline and Fitzpatrick, David A. and Burnell, Ann (2005) The anhydrobiotic potential and molecular phylogenetics of species and strains of Panagrolaimus (Nematoda, Panagrolaimidae). Journal of Experimental Biology, 208. pp. 2433-2445.

    Sharma, Visha and He, Chao and Sacca-Schaeffer, Julian and Brzozowski, Eric and Martin-Herranz, Daniel E. and Mendelowitz, Zelda and Fitzpatrick, David A. and O'Halloran, Damien M. (2013) Insight into the Family of Na+/Ca2+ Exchangers of Caenorhabditis elegans. Genetics, 195. pp. 611-619. ISSN 0016-6731

    Sheehan, Gerard and Clarke, Gráinne and Kavanagh, Kevin (2018) Characterisation of the cellular and proteomic response of Galleria mellonella larvae to the development of invasive aspergillosis. BMC Microbiology, 18 (63). ISSN 1471-2180

    Sheehan, Gerard and Garvey, Amy and Croke, Michael and Kavanagh, Kevin (2018) Innate humoral immune defences in mammals and insects: The same, with differences ? Virulence, 9 (1). pp. 1625-1639. ISSN 2150-5608

    Sheehan, Gerard and Kavanagh, Kevin (2018) Analysis of the early cellular and humoral responses of Galleria mellonella larvae to infection by Candida albicans. Virulence, 9 (1). pp. 163-172. ISSN 2150-5608

    Shen, M. and Guan, J. and Xu, L. and He, J. and Jones, G.W. and Song, Y. (2012) Steered molecular dynamics simulations on the binding of the appendant structure and helix-β2 in domain-swapped human cystatin C dimer. Journal of Biomolecular Structure and Dynamics. ISSN 0739-1102

    Sheridan, Graham K. and Pickering, Mark and Twomey, Clare and Moynagh, Paul N. and O'Connor, John J. and Murphy, Keith J. (2007) NF-κB activity in distinct neural subtypes of the rat hippocampus: Influence of time and GABA antagonism in acute slice preparations. Learning & Memory, 14 (8). pp. 525-532. ISSN 1072-0502

    Sheridan, Kevin J. and Dolan, Stephen K. and Doyle, Sean (2015) Endogenous cross-talk of fungal metabolites. Frontiers in Microbiololgy, 5 (732). pp. 1-11. ISSN 1664-302X

    Sheridan, Kevin J. and Lechner, Beatrix Elizabeth and O'Keeffe, Grainne and Keller, Markus A. and Werner, Ernst R. and Lindner, Herbert and Jones, Gary W. and Haas, Hubertus and Doyle, Sean (2016) Ergothioneine Biosynthesis and Functionality in the Opportunistic Fungal Pathogen, Aspergillus fumigatus. Scientific Reports, 6 (35306). ISSN 2045-2322

    Shevlin, Karen D. and Hennessy, Roseanne and Dillon, Aoife B. and O'Dea, Philip and Griffin, Christine and Williams, Christopher D. (2017) Stump-harvesting for bioenergy probably has transient impacts on abundance, richness and community structure of beetle assemblages. Agricultural and Forest Entomology, 19. pp. 388-399. ISSN 1461-9555

    Shinoy, Minu and Dennehy, Ruth and Coleman, Elaine and Carberry, Stephen and Schaffer, Kirsten and Callaghan, Maire and Doyle, Sean and McClean, Siobhan (2013) Immunoproteomic Analysis of Proteins Expressed by Two Related Pathogens, Burkholderia multivorans and Burkholderia cenocepacia, during Human Infection. PLoS ONE, 8 (11). ISSN 1932-6203

    Shun-ichiro, Oda and Schroeder, Martina and Khan, Amir R. (2009) Structural Basis for Targeting of Human RNA Helicase DDX3 by Poxvirus Protein K7. Structure, 11 (17). pp. 1528-1537. ISSN 0969-2126

    Siednienko, Jakub and Jackson, Ruaidhri and Mellett, Mark and Delagic, Nezira and Yang, Shuo and Wang, Bingwei and Tang, Lisa S. and Callanan, John J. and Mahon, Bernard P. and Moynagh, Paul N. (2012) Pellino3 targets the IRF7 pathway and facilitates autoregulation of TLR3- and viral-induced expression of type I interferons. Nature Immunology, 13. pp. 1055-1062. ISSN 1529-2908

    Siednienko, Jakub and Maratha, Ashwini and Yang, Shuo and Mitkiewicz, Malgorzata and Miggin, Sinead and Moynagh, Paul N. (2011) Nuclear Factor κB Subunits RelB and cRel Negatively Regulate Toll-like Receptor 3-mediated β-Interferon Production via Induction of Transcriptional Repressor Protein YY1. Journal of Biological Chemistry, 286 (52). pp. 44750-44763. ISSN 0021-9258

    Siednienko, Jakub and Nowak, Joanna and Moynagh, Paul N. and Gorczyca, Wojciech A. (2011) Nitric oxide affects IL-6 expression in human peripheral blood mononuclear cells involving cGMP-dependent modulation of NF-jB activity. Cytokine, 54. pp. 282-288. ISSN 1043-4666

    Sipos, György and Prasanna, Arun N. and Walter, Mathias C. and Krizsán, Krisztina and Brigitta Kiss, Brigitta and Jaqueline Hess, Jaqueline and Varga, Torda and Slot, Jason and Riley, Robert and Bóka, Bettina and Rigling, Daniel and Barry, Kerrie and Lee, Juna and Mihaltcheva, Sirma and LaButti, Kurt and Lipzen, Anna and Waldron, Rose and Moloney, Nicola M. and Sperisen, Christoph and Kredics, László and Vágvölgyi, Csaba and Patrignani, Andrea and Fitzpatrick, David A. and Nagy, István and Doyle, Sean and Anderson, James B. and Grigoriev, Igor V. and Münsterkötter, Martin and Nagy, László (2017) Genome expansion and lineage-specific genetic innovations in the forest pathogenic fungi Armillaria. Nature Ecology & Evolution, 1. pp. 1931-1941. ISSN 2397-334X

    Siu Ting Salvatierra, Karen (2014) Novel approaches for large-scale phylogenetics and applications in the context of the amphibian tree of life. PhD thesis, National University of Ireland Maynooth.

    Skerry, Ciaran M. and Mahon, Bernard P. (2011) A Live, Attenuated Bordetella pertussis Vaccine Provides Long-Term Protection against Virulent Challenge in a Murine Model. Clinical and Vaccine Immunology, 18 (2). pp. 187-193. ISSN 1556-6811

    Skerry, Ciaran M. and Cassidy, Joseph P. and English, Karen (2009) A Live Attenuated Bordetella pertussis Candidate Vaccine Does Not Cause Disseminating Infection in Gamma Interferon Receptor Knockout Mice. Clinical and Vaccine immunology, 16 (9). pp. 1344-1351. ISSN 1556-679X

    Smith, Alanna (2012) Synthesis and Characterisation of Silver(I)-Bioglues and Assessment of Biological Activity of AgNO3 Against Staphylococcus aureus. PhD thesis, National University of Ireland Maynooth.

    Smith, Alanna and McCann, Malachy and Kavanagh, Kevin (2013) Proteomic analysis of the proteins released from Staphylococcus aureus following exposure to Ag(I). Toxicology in Vitro, 27. pp. 1644-1648. ISSN 0887-2333

    Smith, Alanna and Rowan, Raymond and McCann, Malachy and Kavanagh, Kevin (2012) Exposure of Staphylococcus aureus to silver(I) induces a short term protective response. Biometals, 25 (3). pp. 611-616. ISSN 0966-0844

    Smith, Elizabeth B. and Dolan, Stephen K. and Fitzpatrick, David A. and Doyle, Sean and Jones, Gary W. (2016) Towards understanding the gliotoxin detoxification mechanism: in vivo thiomethylation protects yeast from gliotoxin cytotoxicity. Microbial Cell, 3 (3). pp. 120-125. ISSN 2311-2638

    Smith, Helen A. (2014) Production of antimicrobials and antioxidants from filamentous fungi. PhD thesis, National University of Ireland Maynooth.

    Smith, Helen A. and Doyle, Sean and Murphy, Richard (2015) Filamentous fungi as a source of natural antioxidants. Food Chemistry, 185. pp. 389-397. ISSN 0308-8146

    Smith, Sinéad M. and Freeley, Michael and Moynagh, Paul N. and Kelleher, Dermot P. (2017) Differential modulation of Helicobacter pylori lipopolysaccharide‐mediated TLR2 signaling by individual Pellino proteins. Helicobacter, 22 (1). e12325.

    Sperling, Erik A. and Peterson, Devin J. and Pisani, Davide (2009) Phylogenetic-Signal Dissection of Nuclear Housekeeping Genes Supports the Paraphyly of Sponges and the Monophyly of Eumetazoa. Molecular Biology and Evolution, 26 (10). pp. 2261-2274. ISSN 0737-4038

    Stack, Colin M. and Easwaramoorthy, Subbana G. and Metha, Usha K. and Downes, Martin and Griffin, Christine and Burnell, Ann (2000) Molecular characterisation of Heterorhabditis indica isolates from India, Kenya, Indonesia and Cuba. Nematology, 2 (5). pp. 477-487.

    Stack, Deirdre and Neville, Claire and Doyle, Sean (2007) Nonribosomal peptide synthesis in Aspergillus fumigatus and other fungi. Microbiology, 153 (5). pp. 1297-1306. ISSN 1465-2080

    Stack, Deirdre and Frizzell, Aisling and Tomkins, Karen and Doyle, Sean (2009) Solid Phase 4′-Phosphopantetheinylation: Fungal Thiolation Domains are Targets for Chemoenzymatic Modification. Bioconjugate Chemistry, 20 (8). pp. 1514-1522. ISSN 1043-1802

    Staunton, Lisa (2011) Proteomic Profiling of Animal Models of Myotonia and Motor Neuron Disease. PhD thesis, National University of Ireland Maynooth.

    Staunton, Lisa and O’Connell, Kathleen and Ohlendieck, Kay (2011) Proteomic Profiling of Mitochondrial Enzymes during Skeletal Muscle Aging. Journal of Aging Research (908035). pp. 1-9. ISSN 2090-2204

    Staunton, Lisa and Jockusch, Harald and Ohlendieck, Kay (2011) Proteomic analysis of muscle affected by motor neuron degeneration: The wobbler mouse model of amyotrophic lateral sclerosis. Biochemical and Biophysical Research Communications, 406 (4). pp. 595-600. ISSN 0006-291X

    Staunton, Lisa and Jockusch, Harald and Wiegand, Christiane and Albrecht, Timo and Ohlendieck, Kay (2011) Identification of secondary effects of hyperexcitability by proteomic profiling of myotonic mouse muscle. Molecular BioSystems, 8. pp. 2480-2489. ISSN 1742-206X

    Staunton, Lisa and Zweyer, Margit and Swandulla, Dieter and Ohlendieck, Kay (2012) Mass spectrometry-based proteomic analysis of middle-aged vs. aged vastus lateralis reveals increased levels of carbonic anhydrase isoform 3 in senescent human skeletal muscle. International Journal of Molecular Medicine, 30 (4). pp. 723-733. ISSN 1107-3756

    Stock, Patricia and Griffin, Christine and Burnell, Ann (2002) Morphological characterisation of three isolates of Heterorhabditis Poinar, 1976 from the "Irish group" (Nematoda: Rhabditida: Heterorhabditidae)and additional evidence supporting their recognition as a distinct species, H. downesi n. sp. Systematic Parasitology, 51. pp. 95-106.

    Stock, S. Patricia and Griffin, Christine and Chaerani, Rani (2004) Morphological and molecular characterisation of Steinernema hermaphroditum n. sp. (Nematoda: Steinernematidae), an entomopathogenic nematode from Indonesia, and its phylogenetic relationships with other members of the genus. Nematology, 6. pp. 401-412.

    Streif, Stefan and Findeisen, Rolf and Bullinger, Eric (2006) Relating cross Gramians and sensitivity analysis in systems biology. In: Proceedings of the 17th International Symposium on Mathematical Theory of Networks and Systems (MTNS 2006), July 24-28, 2006, Kyoto International Conference Hall, Kyoto, Japan.

    Subramanian, Vijay G. and Duffy, Ken R. and Turner, Marian L. and Hodgkin, Philip D. (2008) Determining the expected variability of immune responses using the Cyton Model. Journal of Mathematical Biology, 56 (6). pp. 861-892. ISSN 1432-1416

    Sulaiman, Gomaa and Cooke, Aoife and Ffrench, Brendan and Gasch, Claudia and Abdullai, Olayemi Azeez and O'Connor, Kevin and Elbaruni, Salah and Blackshields, Gordon and Spillane, Cathy and Keegan, Helen and McEneaney, Victoria and Knittel, Ronan and Rogers, Annamarie and Jeffrey, Ian B. and Doyle, Brendan and Bates, Mark and d'Adhemar, Charles and Lee, Mathia Y.C. and Campbell, Eric L. and Moynagh, Paul N. and Higgins, Desmond G. and O'Toole, Sharon and O'Neill, Luke and O'Leary, John J. and Gallagher, Michael F. (2017) MyD88 is an essential component of retinoic acid-induced differentiation in human pluripotent embryonal carcinoma cells. Cell Death and Differentiation, 24. pp. 1975-1986. ISSN 1476-5403

    Sullivan, C.F. and Dix, Philip and Burke, J.I. (1993) Production of artificial seeds of Daucus Carota. Irish Journal of Agricultural and Food Research, 32. pp. 118-119. ISSN 07916833

    Sullivan, C.F. and Finch, I. and Dix, Philip and Burke, J.I. (1993) Studies of in vitro Propagation Systems for Sugar Beet. Irish Journal of Agricultural and Food Research, 32 (1). pp. 27-35.

    Sullivan, Maeve and Folytn-Arfa Kia, Agnieszka and Long, Mark and Walsh, Maureen and Kavanagh, Kevin and McClean, Siobhan and Creaven, Bernadette S. (2014) Isolation and characterisation of silver(I) complexes of substituted coumarin-4-carboxylates which are effective against Pseudomonas aeruginosa biofilms. Polyhedron, 67 (8). pp. 549-559. ISSN 0277-5387

    Surlis, Carla (2015) Mitocidal resistance in the ectoparasitic mite,Varroa destructor, and the relationship with its host Apis mellifera. PhD thesis, National University of Ireland Maynooth.

    Surlis, Carla and Carolan, James C. and Coffey, Mary F. and Kavanagh, Kevin (2016) Proteomic analysis of Bayvarol® resistance mechanisms in the honey bee parasite Varroa destructor. Journal of Apicultural Research, 55 (1). pp. 49-64. ISSN 2078-6913

    Suzuki, Satoshi and Bayram, Ozgur and Braus, Gerhard H. (2013) conF and conJ contribute to conidia germination and stress response in the filamentous fungus Aspergillus nidulans. Fungal Genetics and Biology, 56. pp. 42-53. ISSN 1096-0937

    T

    Telgmann, Regina and von Kleist, Max and Huisinga, Wilhelm (2006) Software supported modelling in pharmacokinetics. In: Computational Life Sciences II: Second International Symposium, CompLife 2006, Cambridge, UK, September 27-29, 2006. Proceedings. Lecture Notes in Computer Science (LNCS), 4216/2006 . Springer Berlin / Heidelberg, pp. 216-225. ISBN 978-3-540-45767-1

    Thanner, Sophie and Drissner, D. and Walsh, Fiona (2016) Antimicrobial Resistance in Agriculture. mBio, 7 (2). e02227-15. ISSN 2150-7511

    Thati, Bhumika and Noble, Andy and Rowan, Raymond and Creaven, Bernadette S. and Walsh, Maureen and McCann, Malachy and Egan, Denise (2007) Mechanism of action of coumarin and silver(I)- coumarin complexes against the pathogenic yeast Candida albicans. Toxicology in Vitro.

    Thati, Bhumika and Noble, Andy and Creaven, Bernadette S. and Walsh, Maureen and Kavanagh, Kevin and Egan, Denise A. (2007) Apoptotic cell death: A possible key event in mediating the in vitro anti-proliferative effect of a novel copper(II) complex, [Cu(4-Mecdoa) (phen)2] (phen=phenanthroline, 4-Mecdoa=4-methylcoumarin-6, 7-dioxactetate), in human malignant cancer cells. European Journal of Pharmacology, 569 (1-2). pp. 16-28. ISSN 0014-2999

    Thati, Bhumika and Noble, Andy and Creaven, Bernadette S. and Walsh, Maureen and Kavanagh, Kevin and Egan, Denise A. (2007) An in vitro investigation of the induction of apoptosis and modulation of cell cycle events in human cancer cells by bisphenanthroline-coumarin-6,7-dioxacetatocopper(II) complex. Chemico-Biological Interactions, 168 (2). pp. 143-158. ISSN 0009-2797

    Thati, Bhumika and Noble, Andy and Rowan, Raymond and Creaven, Bernadette S. and Walsh, Maureen and McCann, Malachy and Egan, Denise and Kavanagh, Kevin (2007) Mechanism of action of coumarin and silver(I)–coumarin complexes against the pathogenic yeast Candida albicans. Toxicology in Vitro, 21 (5). pp. 801-808. ISSN 0887-2333

    Timmons, A.M. and Dix, Philip (1991) Influence of ploidy on plastome mutagenesis in Nicotiana. A.M. Timmons* and P.J. Dix. Molecular and General Genetics, 227 (2). pp. 330-333.

    Timmons, Aileen Mary and Dix, Philip (1993) Ultrastructure of Lycopersicon peruvianum leaf explants and streptomycin-resistant shoots on medium containing streptomycin. Plant Cell, Tissue and Organ Culture, 34. pp. 115-123.

    Ting, Kay Reen and Henry, Michael and Meiller, Justine and Larkin, Annemarie and Clynes, Martin and Meleady, Paula and Bazou, Despina and Dowling, Paul and O'Gorman, Peter (2017) Novel panel of protein biomarkers to predict response to bortezomib-containing induction regimens in multiple myeloma patients. BBA Clinical, 8. pp. 28-34. ISSN 2214-6474

    Tobin, Laura M. (2012) Immune Mechanisms of Mesenchymal Stem Cell Therapy for Acute Graft versus Host Disease. PhD thesis, National University of Ireland Maynooth.

    Tobin, Laura M. and Mavinkurve, Meena and Carolan, Eirin and Kinlen, David and O'Brien, Eoin C. and Little, Mark A. and Finlay, David K. and Cody, Declan and Hogan, Andrew and O'Sheal, Donal (2019) NK cells in childhood obesity are activated, metabolically stressed, and functionally deficient. JCI Insight, 2 (24). e94939. ISSN 2379-3708

    Travers, Simon A. A. and Clewley, Jonathan P. and Glynn, Judith R. and Fine, Paul E. M. and Crampin, Amelia C. and Sibande, Felix and Mulawa, Dominic and McInerney, James O. and McCormack, Grace P. (2004) Timing and Reconstruction of the Most Recent Common Ancestor of the Subtype C Clade of Human Immunodeficiency Virus Type 1. Journal of Virology, 78 (19). pp. 10501-10506.

    Truman, Andrew W. and Kristjansdottir, Kolbrun and Wolfgeher, Donald and Hasin, Naushaba and Polier, Sigrun and Zhang, Hong and Perrett, Sarah and Prodromou, Chrisostomos and Jones, Gary W. and Kron, Stephen J. (2012) CDK-Dependent Hsp70 Phosphorylation Controls G1 Cyclin Abundance and Cell-Cycle Progression. Cell, 151 (6). pp. 1308-1318. ISSN 0092-8674

    Türkela, Sezai and Bayram, Ozgur and Arika, Elif (2009) Glucose Signaling Pathway and Growth Conditions Regulate Gene Expression in Retrotransposon Ty2. Zeitschrift für Naturforschung C: a Journal of Biosciences, 64 (7-8). pp. 526-532. ISSN 0939-5075

    V

    Valkov, Vladimir T. and Gargano, Daniela and Mann, Carmela and Formisano, Gelsomina and Dix, Philip and Gray, John C. and Scotti, Nunzia (2011) High efficiency plastid transformation in potato and regulation of transgene expression in leaves and tubers by alternative 50 and 30 regulatory sequences. Transgenic Research, 20. pp. 137-151. ISSN 0962-8819

    Valsecchi, Isabel and Bayram, Ozlem Sarikaya and Wong Sak Hoi, Joanne and Muszkieta, Laetitia and Gibbons, John and Prevost, Marie‐Christine and Mallet, Adeline and Krijnse‐Locker, Jacomina and Ibrahim‐Granet, Oumaima and Mouyna, Isabelle and Carr, Paul D. and Bromley, Michael and Aimanianda, Vishukumar and Yu, Jae‐Hyuk and Rokas, Antonis and Braus, Gerhard H. and Saveanu, Cosmin and Bayram, Ozgur and Latgé, Jean Paul (2017) MybA, a transcription factor involved in conidiation and conidial viability of the human pathogen Aspergillus fumigatus. Molecular Microbiology, 105 (6). pp. 880-900. ISSN 1365-2958

    Velikova, Nadya and Kavanagh, Kevin and Wells, Jerry M. (2016) Evaluation of Galleria mellonella larvae for studying the virulence of Streptococcus suis. BMC Microbiology, 16 (291). ISSN 1471-2180

    Verwoerd, Mark and Mason, Oliver (2007) Conditions for the existence of fixed points in a finite system of Kuramoto oscillators. In: Proceedings of the 2007 American Control Conference, Marriott Marquis Hotel at Times Square, New York City, USA, July 11-13, 2007. IEEE, pp. 4613-4618. ISBN 1-4244-0988-8

    Vickers, Imelda and Reeves, Emer P. and Kavanagh, Kevin and Doyle, Sean (2007) Isolation, activity and immunological characterisation of a secreted aspartic protease, CtsD, from Aspergillus fumigatus. Protein Expression and Purification, 53 (1). pp. 216-224. ISSN 1046-5928

    Vicuna, Deborah and Malone, Renee P. and Dix, Philip (2011) Increased Tolerance to Abiotic Stresses in Tobacco Plants Expressing a Barley Cell Wall Peroxidase. Journal of Plant Sciences, 6 (1). pp. 1-13. ISSN 1816-4951

    Vicuna Requesens, Deborah and Malone, Renee P. and Dix, Philip (2014) Expression of a Barley Peroxidase in Transgenic Apple (Malus domestica L.) Results in Altered Growth, Xylem Formation and Tolerance to Heat Stress. Journal of Plant Sciences, 9 (2). pp. 58-66. ISSN 1816-4951

    Vogel, Simone Z. and Schlickeiser, Stephan and Jurchott, Karsten and Akyuez, Levent and Schumann, Julia and Appelt, Christine and Vogt, Katrin and Schroeder, Martina and Vaeth, Martin and Berberich-Siebelt, Friederike and Lutz, Manfred B. and Grutz, Gerald and Sawitzki, Birgit (2015) TCAIM Decreases T Cell Priming Capacity of Dendritic Cells by Inhibiting TLR-Induced Ca2+ Influx and IL-2 Production. Journal of Immunology, 1 (194). pp. 3136-3146. ISSN 0022-1767

    van Gent, Michiel and Braem, Steven G.E. and de Jonge, Annemieke and Delagic, Nezira and Peeters, Janneke G.C. and Moynagh, Paul N. and Kremmer, Elisabeth and Wiertz, Emmanuel and Ovaa, Huib and Griffin, Bryan D. and Ressing, Maaike E. (2014) Epstein-Barr Virus Large Tegument Protein BPLF1 Contributes to Innate Immune Evasion through Interference with Toll-Like Receptor Signaling. PLoS Pathogens, 10 (2). e1003960. ISSN 1553-7374

    van den Bekerom, Rob Jozef Matheus (2010) An Investigation into Transformation and RNA Editing in the Lolium Plastome. PhD thesis, National University of Ireland Maynooth.

    van den Bekerom, Rob Jozef Matheus and Dix, Philip and Diekmann, Kerstin and Barth, Susanne (2013) Variations in efficiency of plastidial RNA editing within ndh transcripts of perennial ryegrass (Lolium perenne) are not linked to differences in drought tolerance. AoB PLANTS, 5 (plt035). pp. 1-11. ISSN 2041-2851

    von Kleist, Max and Huisinga, Wilhelm (2009) Pharmacokinetic-Pharmacodynamic relationship of NRTIs and its connection to viral escape: An example based on Zidovudine. European Journal of Pharmaceutical Sciences, 36 (4-5). pp. 535-543. ISSN 0928-0987

    von Kleist, Max and Huisinga, Wilhelm (2007) Physiologically Based Pharmacokinetic Modelling: A Sub-Compartmentalized Model of Tissue Distribution. Journal of Pharmacokinetics and Pharmacodynamics, 34 (6). pp. 789-806. ISSN 1573-8744

    von Zeska Kress, Marcia Regina and Harting, Rebekka and Bayram, Ozgur and Christmann, Martin and Irmer, Henriette and Valerius, Oliver and Schinke, Josua and Goldman, Gustavo H. and Braus, Gerhard H. (2012) The COP9 signalosome counteracts the accumulation of cullin SCF ubiquitin E3 RING ligases during fungal development. Molecular Microbiology, 83 (6). pp. 1162-1177. ISSN 0950-382X

    W

    Waldron, Rose and McGowan, Jamie and Gordon, Natasha and McCarthy, Charley G.P. and Mitchell, E. Bruce and Doyle, Sean and Fitzpatrick, David A. (2017) Draft Genome Sequence of Dermatophagoides pteronyssinus, the European House Dust Mite. Genome Announcments, 5 (2). e00789-17. ISSN 2169-8287

    Waldron, Rose and McGowan, Jamie and Gordon, Natasha and McCarthy, Charley G.P. and Mitchell, E. Bruce and Fitzpatrick, David A. (2019) Proteome and allergenome of the European house dust mite Dermatophagoides pteronyssinus. PLoS ONE, 14 (5). e0216171. ISSN 1932-6203

    Walsh, Fiona and Amyes, A.K.B. and Amyes, Sebastian G.B. (2003) The in vitro effects of faropenem on lower respiratory tract pathogens isolated in the United Kingdom. International Journal of Antimicrobial Agents, 21 (2). pp. 581-584. ISSN 0924-8579

    Walsh, Fiona and Amyes, Sebastian G.B. and Duffy, Brian (2013) Challenging the concept of bacteria subsisting on antibiotics. International Journal of Antimicrobial Agents, 41. pp. 558-563. ISSN 0924-8579

    Walsh, Fiona and Bracher, S. and Turner, P. and Amyes, Sebastian G.B. (2005) Epidemiological analysis of carbapenem-sensitive and -resistant Pseudomonas aeruginosa. Journal of Hospital Infection, 60 (3). pp. 240-244. ISSN 0195-6701

    Walsh, Fiona and Carnegy, Francis and Willcock, Joanne and Amyes, Sebastian G.B. (2004) Comparative in vitro activity of telithromycin against macrolide-resistant and -susceptible Streptococcus pneumoniae, Moraxella catarrhalis and Haemophilus influenzae. Journal of Antimicrobial Chemotherapy, 53 (5). pp. 793-796. ISSN 0305-7453

    Walsh, Fiona and Cooke, Niamh M. and Smith, Stephen G. and Moran, Gary P. and Cooke, Fiona J. and Ivens, Alasdair and Wain, John and Rogers, Thomas R. (2010) Comparison of two DNA microarrays for detection of plasmid-mediated antimicrobial resistance and virulence factor genes in clinical isolates of Enterobacteriaceae and non-Enterobacteriaceae. International Journal of Antimicrobial Agents, 35 (6). pp. 593-598. ISSN 0924-8579

    Walsh, Fiona and Duffy, Brion (2013) The Culturable Soil Antibiotic Resistome: A Community of Multi-Drug Resistant Bacteria. PLoS ONE. ISSN 1932-6203

    Walsh, Fiona and Ingenfeld, A. and Zampicolli, M. and Hilber-Bodmer, M. and Frey, Jurg E. and Duffy, B. (2011) Real-time PCR methods for quantitative monitoring of streptomycin and tetracycline resistance genes in agricultural ecosystems. Journal of Microbiological Methods, 86 (2). pp. 150-155. ISSN 0167-7012

    Walsh, Fiona and Pelludat, C. and Duffy, B. and Smith, D.P. and Owens, Sarah M. and Frey, Jurg E. and Holliger, E. (2014) Einfluss von Streptomycin in Apfelanlagen auf Antibiotika-Resistenzen in der Umwelt. Agrarforschung Schweiz 5(7+08), 300-305, 2014, 5 (7-8). pp. 300-305.

    Walsh, Fiona and Rogers, Thomas R. (2012) Comparison of plasmid-mediated quinolone resistance and extended-spectrum b-lactamases in third-generation cephalosporin-resistant Enterobacteriaceae from four Irish hospitals. Journal of Medical Microbiology, 61. pp. 142-147. ISSN 0022-2615

    Walsh, Fiona and Rogers, Thomas R. (2008) Detection of blaVIM-2 carbapenemase in Pseudomonas aeruginosa in Ireland. Journal of Antimicrobial Chemotherapy, 61 (1). pp. 219-220. ISSN 0305-7453

    Walsh, Fiona and Smith, Daniel P. and Owens, Sarah M. and Duffy, Brion and Frey, Jurg E. (2014) Restricted streptomycin use in apple orchards did not adversely alter the soil bacteria communities. Frontiers in Microbiology. ISSN 1664-302X

    Walsh, Fiona and Willcock, Joanne and Amyes, Sebastian G.B. (2003) High-level telithromycin resistance in laboratory-generated mutants of Streptococcus pneumoniae. Journal of Antimicrobial Chemotherapy, 52 (3). pp. 345-353. ISSN 0305-7453

    Walsh, Naomi and Dowling, Paul and O'Donovan, Norma and Henry, Michael and Meleady, Paula and Clynes, Martin (2008) Aldehyde dehydrogenase 1A1 and gelsolin identified as novel invasion-modulating factors in conditioned medium of pancreatic cancer cells. Journal of Proteomics, 71 (5). pp. 561-571. ISSN 1874-3919

    Walsh, Naomi and Larkin, Annemarie and Swan, Niall and Conlon, Kevin and Dowling, Paul and McDermott, Ray and Clynes, Martin (2011) RNAi knockdown of Hop (Hsp70/Hsp90 organising protein) decreases invasion via MMP-2 down regulation. Cancer Letters, 306 (2). pp. 180-189. ISSN 0304-3835

    Walsh, Naomi and O'Donovan, Norma and Kennedy, Susan and Henry, Michael and Meleady, Paula and Clynes, Martin and Dowling, Paul (2009) Identification of pancreatic cancer invasion-related proteins by proteomic analysis. Proteome Science, 7 (3). ISSN 1477-5956

    Wang, Yulang and Carolan, James C. and Hao, FuHua and Nicholson, Jeremy K. and Wilkinson, Thomas L. and Douglas, Angela E. (2010) Integrated Metabonomic-Proteomic Analysis of an Insect-Bacterial Symbiotic System. Journal of Proteome Research, 9 (3). pp. 1257-1267. ISSN 1535-3893

    Wang, Bingwei (2011) Investigating the Role of Pellin03 in TNF Signalling. PhD thesis, National University of Ireland Maynooth.

    Ward, Natalie-Anne and Hirst, Simon and Williams, John and Findlay, John B. C. (2012) Pharmacological chaperones increase the cell-surface expression of intracellularly retained mutants of the melanocortin 4 receptor with unique rescuing efficacy profiles. Biochemical Society Transactions, 40. pp. 717-720. ISSN 0300-5127

    Waters, Sinead M. and Doyle, Sean and Murphy, Richard A. and Power, Ronan F.G. (2005) Development of solution phase hybridisation PCR-ELISA for the detection and quantification of Enterococcus faecalis and Pediococcus pentosaceus in Nurmi-type cultures. Journal of Microbiological Methods, 63 (3). pp. 264-275. ISSN 0167-7012

    Weiss, A. and Scheller, F. and Oggenfuss, M. and Walsh, Fiona and Frey, Jurg E. and Drissner, D. and Schmidt, H. (2016) Analysis of the bacterial epiphytic microbiota of oak leaf lettuce with 16S ribosomal RNA gene analysis. Journal of Microbiology, Biotechnology and Food Sciences, 5 (3). pp. 271-276. ISSN 1338-5178

    Wellmer, Frank and Graciet, Emmanuelle and Riechmann, José Luis (2014) Specification of floral organs in Arabidopsis. Journal of Experimental Botany, 65 (1). pp. 1-9. ISSN 0022-0957

    Wessel, Peter M. and Graciet, Emmanuelle and Douce, Roland and Dumas, Renaud (2000) Evidence for Two Distinct Effector-Binding Sites in Threonine Deaminase by Site-Directed Mutagenesis, Kinetic, and Binding Experiments. Biochemistry, 39 (49). pp. 15136-15143. ISSN 0006-2960

    Whelan, Kelly A. and Merves, Jamie F. and Giroux, Veronique and Tanaka, Koji and Guo, Andy and Chandramouleeswaran, Prasanna M. and Benitez, Benitez and Dods, Kara and Que, Jianwen and Masterson, Joanne C. and Fernando, Shahan D. and Godwin, Bridget C. and Klein-Szanto, Andres J. and Chikwava, Kudakwashe and Ruchelli, Eduardo D. and Hamilton, Kathryn E. and Muir, Amanda B. and Wang, Mei-Lun and Furuta, Glenn T. and Falk, Gary W. and Spergel, Jonathan M. and Nakagawa, Hiroshi (2017) Autophagy mediates epithelial cytoprotection in Eosinophilic Oesophagitis. Gut, 66 (7). pp. 1197-1207. ISSN 1468-3288

    Wilkinson, Mark and Thorley, Joseph L. and Pisani, Davide and Lapointe, Francois-Joseph and McInerney, James O. (2004) Some Desiderata for Liberal Supertrees. In: Phylogenetic Supertrees. Computational Biology book series (COBO) (4). Springer, pp. 227-246. ISBN 9781402023293

    Williams, Paul H. and An, Jiandong and Brown, Mark J. F. and Carolan, James C. and Goulson, Dave and Huang, Jiaxing and Ito, Masao (2012) Cryptic Bumblebee Species: Consequences for Conservation and the Trade in Greenhouse Pollinators. PLoS ONE, 7 (3). e32992. ISSN 1932-6203

    Williams, Christopher D. and Dillon, Aoife B. and Ennis, Darragh and Hennessy, Roseanne and Griffin, Christine (2015) Differential susceptibility of pine weevil, Hylobius abietis (Coleoptera: Curculionidae), larvae and pupae to entomopathogenic nematodes and death of adults infected as pupae. Biocontrol, 60 (4). pp. 537-546. ISSN 1386-6141

    Williams, Christopher D. and Dillon, Aoife B. and Girling, Robbie D. and Griffin, Christine (2013) Organic soils promote the efficacy of entomopathogenic nematodes, with different foraging strategies, in the control of a major forest pest: A meta-analysis of field trial data. Biological Control, 65. pp. 357-364. ISSN 1049-9644

    Williams, Christopher D. and Dillon, Aoife B. and Harvey, Christopher D. and Hennessy, Roseanne and Mc Namara, Louise and Griffin, Christine (2013) Control of a major pest of forestry, Hylobius abietis, with entomopathogenic nematodes and fungi using eradicant and prophylactic strategies. Forest Ecology and Management, 305. pp. 212-222. ISSN 0378-1127

    Williams, Paul H. and Brown, Mark J.F. and Carolan, James C. and An, Jiandong and Goulson, Dave and Aytekin, A. Murat and Best, Lincoln R. and Byvaltsev, Alexandr M. and Cederberg, Bjorn and Dawson, Robert and Huang, Jiaxing and Ito, Masao and Monfared, Alireza and Raina, Rifat H. and Schmid-Hempel, Paul and Sheffield, Cory S. and Šima, Peter and Xie, Zenghua (2012) Unveiling cryptic species of the bumblebee subgenus Bombus s. str. worldwide with COI barcodes (Hymenoptera: Apidae). Systematics and Biodiversity, 10 (1). pp. 21-56. ISSN 1477-2000

    Williams, Paul H. and Brown, Mark J.F. and Carolan, James C. and An, Jiandong and Goulson, Dave and Aytekin, A. Murat and Best, Lincoln R. and Byvaltsev, Alexandr M. and Cederberg, Bjorn and Dawson, Robert and Huang, Jiaxing and Ito, Masao and Monfared, Alireza and Raina, Rifat H. and Schmid-Hempel, Paul and Sheffield, Cory S. and Šima, Peter and Xie, Zenghua (2012) Unveiling cryptic species of the bumblebee subgenus Bombus s. str. worldwide with COI barcodes (Hymenoptera: Apidae). Systematics and Biodiversity, 10 (1). pp. 21-56. ISSN 1477-2000

    Winkelstroter, Lizziane K. and Dolan, Stephen K. and Fernanda dos Reis, Thaila and Pedro Bom, Vinicius Leite and Alves de Castro, Patricia and Hagiwara, Daisuke and Alowni, Raneem and Jones, Gary W. and Doyle, Sean and Brown, Neil Andrew and Goldman, Gustavo H. (2015) Systematic Global Analysis of Genes Encoding Protein Phosphatases in Aspergillus fumigatus. G3 : Genes, Genomes, Genetics, 5. pp. 1525-1539. ISSN 2160-1836

    Wren, A.W. and Coughlan, A. and Smale, K.E. and Misture, S.T. and Mahon, Bernard P. and Clarkin, O.M. and Towler, M.R. (2012) Fabrication of CaO–NaO–SiO 2 /TiO 2 scaffolds for surgical applications. Journal of Materials Science: Materials in Medicine, 23 (12). pp. 2881-2891. ISSN 1573-4838

    Wuest, Samuel E. and Ó'Maoiléidigh, Diarmuid S. and Rae, Liina and Kwasniewska, Kamila and Raganelli, Andrea and Hanczaryka, Katarzyna and Lohan, Amanda J. and Loftus, Brendan and Graciet, Emmanuelle and Wellmer, Frank (2012) Molecular basis for the specification of floral organs by APETALA3 and PISTILLATA. Proceedings of the National Academy of Sciences, 109 (33). pp. 13452-13457. ISSN 1091-6490

    X

    Xiao-Dong, Dnag and Kelleher, Colin T. and Howard Williams, Emma and Meade, Conor (2012) Rapid identification of chloroplast haplotypes using High Resolution Melting analysis. Molecular Ecology Resources, 12 (4). pp. 894-908. ISSN 1755-098X

    Xu, Li-Qiong and Wu, Si and Buell, Alexander K. and Cohen, Samuel I.A. and Chen, Li-Jun and Hu, Wan-Hui and Cusack, Sarah and Itzhaki, Laura S. and Zhang, Hong and Knowles, Tuomas P.J. and Dobson, Christopher M. and Welland, Mark E. and Jones, Gary W. and Perrett, Sarah (2013) Influence of specific HSP70 domains on fibril formation of the yeast prion protein Ure2. Philosophical Transactions of the Royal Society B, 368 (1617). p. 20110410. ISSN 0962-8436

    Xu, Linan (2016) Deciphering Functional Significance of Substrate-Binding Domain of Ssa1 on Heat-Shock Response and Prion Propagation. PhD thesis, National University of Ireland Maynooth.

    Xu, Linan and Hasin, Naushaba and Shen, Manli and He, Jianwei and Xue, Youlin and Zhou, Xiaohong and Perrett, Sarah and Song, Youtao and Jones, Gary W. (2013) Using Steered Molecular Dynamics to Predict and Assess Hsp70 Substrate-Binding Domain Mutants that Alter Prion Propagation. PLoS Computational Biology, 9 (1). ISSN 1553-734X

    Y

    Yang, Shuo and Wang, Bingwei and Humphries, Fiachra and Hogan, Andrew and O'Sheal, Donal and Moynagh, Paul N. (2014) The E3 Ubiquitin Ligase Pellino3 Protects against Obesity-Induced Inflammation and Insulin Resistance. Immunity, 41 (6). ISSN 1097-4180

    Yang, Shuo and Wang, Bingwei and Humphries, Fiachra and Jackson, Ruaidhri and Healy, Mark and Bergin, Ronan and Aviello, Gabriella and Hall, Barry and McNamara, Deirdre and Darby, Trevor and Quinlan, Aoife and Shanahan, Fergus and Melgar, Silvia and Fallon, Padraic G. and Moynagh, Paul N. (2013) Pellino3 ubiquitinates RIP2 and mediates Nod2-induced signaling and protective effects in colitis. Nature Immunology, 14 (9). pp. 927-936. ISSN 1529-2908

    Yang, Shuo and Wang, Bingwei and Tang, Lisa S. and Siednienko, Jackub and Callanan, John J. and Moynagh, Paul N. (2013) Pellino3 targets RIP1 and regulates the pro-apoptotic effects of TNF-α. Nature Communications, 4 (2583). ISSN 2041-1723

    Young, Pamela A. (2013) The effect of Retinol Binding Protein on the Proteome of muscle cells. PhD thesis, National University of Ireland Maynooth.

    Z

    Zenner, Annemie N.R.L. (2011) Factors influencing the outcome of male-male encounters in the entomopathogenic nematode Steinernema spp. PhD thesis, National University of Ireland Maynooth.

    Zenner, Annemie N.R.L. and O'Callaghan, Kathryn M. and Griffin, Christine (2014) Lethal Fighting in Nematodes Is Dependent on Developmental Pathway: Male-Male Fighting in the Entomopathogenic Nematode Steinernema longicaudum. PLoS ONE, 9 (2). e89385. ISSN 1932-6203

    Zuniga-Soto, Evelyn and Fitzpatrick, David A. and Doohan, Fiona M. and Mullins, Ewen (2019) Insights into the transcriptomic response of the plant engineering bacterium Ensifer adhaerens OV14 during transformation. Scientific Reports, 9 (10344). ISSN 2045-2322

    Ó

    Ó'Maoiléidigh, Diarmuid S. and Graciet, Emmanuelle and Wellmer, Frank (2014) Gene networks controlling Arabidopsis thaliana flower development. New Phytologist, 201 (1). pp. 16-30. ISSN 0028-646X

    Ó'Maoiléidigh, Diarmuid S. and Thomson, Bennett and Raganelli, Andrea and Wuest, Samuel E. and Ryan, Patrick T. and Kwasniewska, Kamila and Carles, Cristel C. and Graciet, Emmanuelle and Wellmer, Frank (2015) Gene network analysis of Arabidopsis thaliana flower development through dynamic gene perturbations. Plant Journal, 83. pp. 344-358. ISSN 1365-313X

    Ó'Maoiléidigh, Diarmuid S. and Wuest, Samuel E. and Rae, Liina and Raganelli, Andrea and Ryan, Patrick T. and Kwasniewska, Kamila and Das, Pradeep and Lohan, Amanda J. and Loftus, Brendan and Graciet, Emmanuelle and Wellmer, Frank (2013) Control of Reproductive Floral Organ Identity Specification in Arabidopsis by the C Function Regulator AGAMOUSC. Plant Cell, 25 (7). pp. 2482-2503. ISSN 1040-4651

    This list was generated on Fri Dec 6 22:02:37 2019 UTC.